RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 HERPUD2Q9BSE4 406 aa4.59□□□□□ -1.67
SRP54-212ENST00000556992 COLEC11Q9BWP8 271 aa4.59□□□□□ -1.67
SRP54-212ENST00000556992 FRMD8Q9BZ67 464 aaPredicted RBP4.59□□□□□ -1.67
SRP54-212ENST00000556992 NEUROG2Q9H2A3 272 aa4.59□□□□□ -1.67
SRP54-212ENST00000556992 ELAC1Q9H777 363 aaKnown RBP4.59□□□□□ -1.67
SRP54-212ENST00000556992 FAM204AQ9H8W3 233 aa4.59□□□□□ -1.67
SRP54-212ENST00000556992 TMBIM4Q9HC24 238 aa4.59□□□□□ -1.67
SRP54-212ENST00000556992 CSNK1G1Q9HCP0 422 aa4.59□□□□□ -1.67
SRP54-212ENST00000556992 CNGB3Q9NQW8 809 aa4.59□□□□□ -1.67
SRP54-212ENST00000556992 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.59□□□□□ -1.67
SRP54-212ENST00000556992 TMEM161AQ9NX61 479 aa4.59□□□□□ -1.67
SRP54-212ENST00000556992 RCOR3Q9P2K3 495 aaPredicted RBP4.59□□□□□ -1.67
SRP54-212ENST00000556992 NCDNQ9UBB6 729 aa4.59□□□□□ -1.67
SRP54-212ENST00000556992 SAE1Q9UBE0 346 aaPredicted RBP4.59□□□□□ -1.67
SRP54-212ENST00000556992 DNPEPQ9ULA0 475 aa4.59□□□□□ -1.67
SRP54-212ENST00000556992 STAP1Q9ULZ2 295 aa4.59□□□□□ -1.67
SRP54-212ENST00000556992 B3GALT1Q9Y5Z6 326 aa4.59□□□□□ -1.67
SRP54-212ENST00000556992 NFS1Q9Y697 457 aa4.59□□□□□ -1.67
SRP54-212ENST00000556992 BCLAF3A2AJT9 711 aaKnown RBP4.58□□□□□ -1.68
SRP54-212ENST00000556992 MYBPHLA2RUH7 354 aa4.58□□□□□ -1.68
SRP54-212ENST00000556992 CASTOR2A6NHX0 329 aa4.58□□□□□ -1.68
SRP54-212ENST00000556992 TULP2O00295 520 aa4.58□□□□□ -1.68
SRP54-212ENST00000556992 DNM1LO00429 736 aa4.58□□□□□ -1.68
SRP54-212ENST00000556992 DNALI1O14645 258 aaPredicted RBP4.58□□□□□ -1.68
SRP54-212ENST00000556992 APOL1O14791 398 aa4.58□□□□□ -1.68
SRP54-212ENST00000556992 CAPN9O14815 690 aa4.58□□□□□ -1.68
SRP54-212ENST00000556992 MCF2LO15068 1137 aa4.58□□□□□ -1.68
SRP54-212ENST00000556992 ALOX15BO15296 676 aa4.58□□□□□ -1.68
SRP54-212ENST00000556992 EIF3HO15372 352 aaKnown RBP eCLIP4.58□□□□□ -1.684e-6■■■■■ 29.2
SRP54-212ENST00000556992 PDPK1O15530 556 aa4.58□□□□□ -1.68
SRP54-212ENST00000556992 RIPK2O43353 540 aa4.58□□□□□ -1.68
SRP54-212ENST00000556992 MGEA5O60502 916 aa4.58□□□□□ -1.68
SRP54-212ENST00000556992 TADA2AO75478 443 aa4.58□□□□□ -1.68
SRP54-212ENST00000556992 DAB1O75553 588 aa4.58□□□□□ -1.68
SRP54-212ENST00000556992 KRT37O76014 449 aa4.58□□□□□ -1.68
SRP54-212ENST00000556992 OAZ2O95190 189 aa4.58□□□□□ -1.68
SRP54-212ENST00000556992 TTC4O95801 387 aa4.58□□□□□ -1.68
SRP54-212ENST00000556992 ZBED1O96006 694 aa4.58□□□□□ -1.68
SRP54-212ENST00000556992 IFNB1P01574 187 aa4.58□□□□□ -1.68
SRP54-212ENST00000556992 TCF3P15923 654 aa4.58□□□□□ -1.68
SRP54-212ENST00000556992 CAPN2P17655 700 aa4.58□□□□□ -1.68
SRP54-212ENST00000556992 IL4RP24394 825 aa4.58□□□□□ -1.68
SRP54-212ENST00000556992 ACAT1P24752 427 aaKnown RBP4.58□□□□□ -1.68
SRP54-212ENST00000556992 ACTN2P35609 894 aa4.58□□□□□ -1.68
SRP54-212ENST00000556992 HCAR3P49019 387 aa4.58□□□□□ -1.68
SRP54-212ENST00000556992 HDAC4P56524 1084 aa4.58□□□□□ -1.68
SRP54-212ENST00000556992 MAP3K7CLP57077 242 aa4.58□□□□□ -1.68
SRP54-212ENST00000556992 DYNLT1P63172 113 aa4.58□□□□□ -1.68
SRP54-212ENST00000556992 TSPY1Q01534 308 aa4.58□□□□□ -1.68
SRP54-212ENST00000556992 OTUD4Q01804 1114 aaKnown RBP4.58□□□□□ -1.68
SRP54-212ENST00000556992 ROR1Q01973 937 aa4.58□□□□□ -1.68
SRP54-212ENST00000556992 RNASELQ05823 741 aaKnown RBP4.58□□□□□ -1.68
SRP54-212ENST00000556992 ADCY2Q08462 1091 aa4.58□□□□□ -1.68
SRP54-212ENST00000556992 ZNF844Q08AG5 666 aa4.58□□□□□ -1.68
SRP54-212ENST00000556992 GPS1Q13098 491 aa4.58□□□□□ -1.68
SRP54-212ENST00000556992 DPYSL3Q14195 570 aa4.58□□□□□ -1.68
SRP54-212ENST00000556992 SLC29A2Q14542 456 aa4.58□□□□□ -1.68
SRP54-212ENST00000556992 STAT4Q14765 748 aa4.58□□□□□ -1.68
SRP54-212ENST00000556992 TRIP13Q15645 432 aaPredicted RBP4.58□□□□□ -1.68
SRP54-212ENST00000556992 OASLQ15646 514 aaKnown RBP4.58□□□□□ -1.68
SRP54-212ENST00000556992 UAP1Q16222 522 aaPredicted RBP4.58□□□□□ -1.68
SRP54-212ENST00000556992 DPYSL2Q16555 572 aa4.58□□□□□ -1.68
SRP54-212ENST00000556992 NFE2Q16621 373 aaPredicted RBP4.58□□□□□ -1.68
SRP54-212ENST00000556992 C15orf59Q2T9L4 293 aaPredicted RBP4.58□□□□□ -1.68
SRP54-212ENST00000556992 SMTNL2Q2TAL5 461 aa4.58□□□□□ -1.68
SRP54-212ENST00000556992 P3H1Q32P28 736 aa4.58□□□□□ -1.68
SRP54-212ENST00000556992 ARL13BQ3SXY8 428 aa4.58□□□□□ -1.68
SRP54-212ENST00000556992 KRT71Q3SY84 523 aa4.58□□□□□ -1.68
SRP54-212ENST00000556992 DCAF6Q58WW2 860 aa4.58□□□□□ -1.68
SRP54-212ENST00000556992 RAB41Q5JT25 222 aa4.58□□□□□ -1.68
SRP54-212ENST00000556992 IZUMO3Q5VZ72 239 aa4.58□□□□□ -1.68
SRP54-212ENST00000556992 SLC9A4Q6AI14 798 aa4.58□□□□□ -1.68
SRP54-212ENST00000556992 PM20D1Q6GTS8 502 aa4.58□□□□□ -1.68
SRP54-212ENST00000556992 HIBCHQ6NVY1 386 aaPredicted RBP4.58□□□□□ -1.68
SRP54-212ENST00000556992 RHBDF2Q6PJF5 856 aa4.58□□□□□ -1.68
SRP54-212ENST00000556992 PPP1R21Q6ZMI0 780 aa4.58□□□□□ -1.68
SRP54-212ENST00000556992 C4orf50Q6ZRC1 276 aa4.58□□□□□ -1.68
SRP54-212ENST00000556992 CLEC20AQ6ZU45 233 aa4.58□□□□□ -1.68
SRP54-212ENST00000556992 CENPUQ71F23 418 aa4.58□□□□□ -1.68
SRP54-212ENST00000556992 LRRC8DQ7L1W4 858 aa4.58□□□□□ -1.68
SRP54-212ENST00000556992 ZNF771Q7L3S4 317 aaPredicted RBP4.58□□□□□ -1.68
SRP54-212ENST00000556992 OVCH1Q7RTY7 1134 aa4.58□□□□□ -1.68
SRP54-212ENST00000556992 ANKS1BQ7Z6G8 1248 aa4.58□□□□□ -1.68
SRP54-212ENST00000556992 CCDC25Q86WR0 208 aa4.58□□□□□ -1.68
SRP54-212ENST00000556992 SPATA2LQ8IUW3 424 aaPredicted RBP4.58□□□□□ -1.68
SRP54-212ENST00000556992 DCP1BQ8IZD4 617 aaKnown RBP4.58□□□□□ -1.68
SRP54-212ENST00000556992 DEFB106AQ8N104 65 aa4.58□□□□□ -1.68
SRP54-212ENST00000556992 PLD5Q8N7P1 536 aa4.58□□□□□ -1.68
SRP54-212ENST00000556992 OR5AN1Q8NGI8 311 aa4.58□□□□□ -1.68
SRP54-212ENST00000556992 PROKR1Q8TCW9 393 aa4.58□□□□□ -1.68
SRP54-212ENST00000556992 APBB2Q92870 758 aa4.58□□□□□ -1.68
SRP54-212ENST00000556992 ARL8AQ96BM9 186 aa4.58□□□□□ -1.68
SRP54-212ENST00000556992 SMARCD1Q96GM5 515 aa4.58□□□□□ -1.68
SRP54-212ENST00000556992 PCED1BQ96HM7 432 aa4.58□□□□□ -1.68
SRP54-212ENST00000556992 TTC25Q96NG3 672 aa4.58□□□□□ -1.68
SRP54-212ENST00000556992 SLC2A13Q96QE2 648 aa4.58□□□□□ -1.68
SRP54-212ENST00000556992 NPY6RQ99463 290 aa4.58□□□□□ -1.68
SRP54-212ENST00000556992 MNTQ99583 582 aa4.58□□□□□ -1.68
SRP54-212ENST00000556992 TCF25Q9BQ70 676 aa4.58□□□□□ -1.68
SRP54-212ENST00000556992 ZNF670Q9BS34 389 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms