RNA–Protein interactions for RNA: ENST00000556809.1

PABPN1-206, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-206ENST00000556809 ALG1LQ6GMV1 187 aa22.66■■□□□ 1.22
PABPN1-206ENST00000556809 ZSWIM9Q86XI8 627 aa22.66■■□□□ 1.22
PABPN1-206ENST00000556809 SLC13A5Q86YT5 568 aaPredicted RBP22.66■■□□□ 1.22
PABPN1-206ENST00000556809 CNTD1Q8N815 330 aa22.66■■□□□ 1.22
PABPN1-206ENST00000556809 ASB12Q8WXK4 309 aa22.66■■□□□ 1.22
PABPN1-206ENST00000556809 ELF4Q99607 663 aaPredicted RBP22.66■■□□□ 1.22
PABPN1-206ENST00000556809 SEMA3CQ99985 751 aa22.66■■□□□ 1.22
PABPN1-206ENST00000556809 FAM118BQ9BPY3 351 aa22.66■■□□□ 1.22
PABPN1-206ENST00000556809 CEP41Q9BYV8 373 aa22.66■■□□□ 1.22
PABPN1-206ENST00000556809 ERVMER34-1Q9H9K5 563 aa22.66■■□□□ 1.22
PABPN1-206ENST00000556809 GDF3Q9NR23 364 aa22.66■■□□□ 1.22
PABPN1-206ENST00000556809 ATP8A1Q9Y2Q0 1164 aa22.66■■□□□ 1.22
PABPN1-206ENST00000556809 IGLON5A6NGN9 336 aa22.65■■□□□ 1.22
PABPN1-206ENST00000556809 PAK4O96013 591 aaPredicted RBP22.65■■□□□ 1.22
PABPN1-206ENST00000556809 RBP3P10745 1247 aa22.65■■□□□ 1.22
PABPN1-206ENST00000556809 CCT8P50990 548 aa22.65■■□□□ 1.22
PABPN1-206ENST00000556809 SUOXP51687 545 aa22.65■■□□□ 1.22
PABPN1-206ENST00000556809 UGP2Q16851 508 aa22.65■■□□□ 1.22
PABPN1-206ENST00000556809 CFAP58Q5T655 872 aa22.65■■□□□ 1.22
PABPN1-206ENST00000556809 GCNT7Q6ZNI0 430 aa22.65■■□□□ 1.22
PABPN1-206ENST00000556809 CDKL3Q8IVW4 592 aaPredicted RBP22.65■■□□□ 1.22
PABPN1-206ENST00000556809 BAHD1Q8TBE0 780 aaPredicted RBP22.65■■□□□ 1.22
PABPN1-206ENST00000556809 HTR3CQ8WXA8 447 aa22.65■■□□□ 1.22
PABPN1-206ENST00000556809 ECHDC3Q96DC8 303 aa22.65■■□□□ 1.22
PABPN1-206ENST00000556809 LENG8Q96PV6 779 aaPredicted RBP22.65■■□□□ 1.22
PABPN1-206ENST00000556809 KLF6Q99612 283 aaPredicted RBP22.65■■□□□ 1.22
PABPN1-206ENST00000556809 MYOCQ99972 504 aa22.65■■□□□ 1.22
PABPN1-206ENST00000556809 KCND1Q9NSA2 647 aa22.65■■□□□ 1.22
PABPN1-206ENST00000556809 PCOLCE2Q9UKZ9 415 aa22.65■■□□□ 1.22
PABPN1-206ENST00000556809 HS3ST3A1Q9Y663 406 aa22.65■■□□□ 1.22
PABPN1-206ENST00000556809 TRAFD1O14545 582 aaPredicted RBP22.64■■□□□ 1.21
PABPN1-206ENST00000556809 RAD51BO15315 384 aa22.64■■□□□ 1.21
PABPN1-206ENST00000556809 MAGEC1O60732 1142 aa22.64■■□□□ 1.21
PABPN1-206ENST00000556809 CES1P23141 567 aa22.64■■□□□ 1.21
PABPN1-206ENST00000556809 PTPN3P26045 913 aa22.64■■□□□ 1.21
PABPN1-206ENST00000556809 PMLP29590 882 aa22.64■■□□□ 1.21
PABPN1-206ENST00000556809 AKT2P31751 481 aa22.64■■□□□ 1.21
PABPN1-206ENST00000556809 CXCR5P32302 372 aa22.64■■□□□ 1.21
PABPN1-206ENST00000556809 DSC2Q02487 901 aa22.64■■□□□ 1.21
PABPN1-206ENST00000556809 TEX44Q53QW1 395 aa22.64■■□□□ 1.21
PABPN1-206ENST00000556809 BRAT1Q6PJG6 821 aa22.64■■□□□ 1.21
PABPN1-206ENST00000556809 ABI3BPQ7Z7G0 1075 aa22.64■■□□□ 1.21
PABPN1-206ENST00000556809 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP22.64■■□□□ 1.21
PABPN1-206ENST00000556809 KLHDC7BQ96G42 594 aa22.64■■□□□ 1.21
PABPN1-206ENST00000556809 BMFQ96LC9 184 aa22.64■■□□□ 1.21
PABPN1-206ENST00000556809 AGAP3Q96P47 875 aa22.64■■□□□ 1.21
PABPN1-206ENST00000556809 GPR27Q9NS67 375 aa22.64■■□□□ 1.21
PABPN1-206ENST00000556809 R3HDM2Q9Y2K5 976 aaKnown RBP22.64■■□□□ 1.21
PABPN1-206ENST00000556809 NEMP1O14524 444 aa22.63■■□□□ 1.21
PABPN1-206ENST00000556809 FLRT2O43155 660 aa22.63■■□□□ 1.21
PABPN1-206ENST00000556809 SOCS5O75159 536 aa22.63■■□□□ 1.21
PABPN1-206ENST00000556809 ATP1A1P05023 1023 aaKnown RBP22.63■■□□□ 1.21
PABPN1-206ENST00000556809 RBL1P28749 1068 aa22.63■■□□□ 1.21
PABPN1-206ENST00000556809 RXRGP48443 463 aa22.63■■□□□ 1.21
PABPN1-206ENST00000556809 CLDN2P57739 230 aa22.63■■□□□ 1.21
PABPN1-206ENST00000556809 WASHC5Q12768 1159 aa22.63■■□□□ 1.21
PABPN1-206ENST00000556809 SUZ12Q15022 739 aaKnown RBP22.63■■□□□ 1.21
PABPN1-206ENST00000556809 TMEM52BQ4KMG9 183 aa22.63■■□□□ 1.21
PABPN1-206ENST00000556809 FAM182AQ5T1J6 154 aa22.63■■□□□ 1.21
PABPN1-206ENST00000556809 ARRDC2Q8TBH0 407 aa22.63■■□□□ 1.21
PABPN1-206ENST00000556809 FAM174AQ8TBP5 190 aa22.63■■□□□ 1.21
PABPN1-206ENST00000556809 SPOCK2Q92563 424 aa22.63■■□□□ 1.21
PABPN1-206ENST00000556809 C10orf88Q9H8K7 445 aa22.63■■□□□ 1.21
PABPN1-206ENST00000556809 BTBD3Q9Y2F9 522 aa22.63■■□□□ 1.21
PABPN1-206ENST00000556809 PCDHGC4Q9Y5F7 938 aa22.63■■□□□ 1.21
PABPN1-206ENST00000556809 SPAARA0A1B0GVQ0 90 aa22.62■■□□□ 1.21
PABPN1-206ENST00000556809 RIOK3O14730 519 aaKnown RBP22.62■■□□□ 1.21
PABPN1-206ENST00000556809 CEP104O60308 925 aa22.62■■□□□ 1.21
PABPN1-206ENST00000556809 THEGLP0DJG4 465 aa22.62■■□□□ 1.21
PABPN1-206ENST00000556809 GNG11P61952 73 aa22.62■■□□□ 1.21
PABPN1-206ENST00000556809 IL9RQ01113 521 aa22.62■■□□□ 1.21
PABPN1-206ENST00000556809 NIPAL4Q0D2K0 466 aa22.62■■□□□ 1.21
PABPN1-206ENST00000556809 DARS2Q6PI48 645 aaKnown RBP22.62■■□□□ 1.21
PABPN1-206ENST00000556809 SLC22A18ASQ8N1D0 253 aa22.62■■□□□ 1.21
PABPN1-206ENST00000556809 PAF1Q8N7H5 531 aa22.62■■□□□ 1.21
PABPN1-206ENST00000556809 OR13H1Q8NG92 308 aa22.62■■□□□ 1.21
PABPN1-206ENST00000556809 SAP25Q8TEE9 199 aa22.62■■□□□ 1.21
PABPN1-206ENST00000556809 SETD7Q8WTS6 366 aaKnown RBP22.62■■□□□ 1.21
PABPN1-206ENST00000556809 CENPTQ96BT3 561 aa22.62■■□□□ 1.21
PABPN1-206ENST00000556809 TEKT5Q96M29 485 aa22.62■■□□□ 1.21
PABPN1-206ENST00000556809 VAT1Q99536 393 aa22.62■■□□□ 1.21
PABPN1-206ENST00000556809 FERMT1Q9BQL6 677 aa22.62■■□□□ 1.21
PABPN1-206ENST00000556809 PCDH12Q9NPG4 1184 aa22.62■■□□□ 1.21
PABPN1-206ENST00000556809 POM121BA6NF01 834 aa22.61■■□□□ 1.21
PABPN1-206ENST00000556809 HTRA2O43464 458 aaPredicted RBP22.61■■□□□ 1.21
PABPN1-206ENST00000556809 MMP20O60882 483 aa22.61■■□□□ 1.21
PABPN1-206ENST00000556809 ZNF189O75820 626 aaPredicted RBP22.61■■□□□ 1.21
PABPN1-206ENST00000556809 XPAP23025 273 aaPredicted RBP22.61■■□□□ 1.21
PABPN1-206ENST00000556809 SIM1P81133 766 aaPredicted RBP22.61■■□□□ 1.21
PABPN1-206ENST00000556809 ELP6Q0PNE2 266 aa22.61■■□□□ 1.21
PABPN1-206ENST00000556809 TRAF2Q12933 501 aa22.61■■□□□ 1.21
PABPN1-206ENST00000556809 SGCGQ13326 291 aa22.61■■□□□ 1.21
PABPN1-206ENST00000556809 TRIP6Q15654 476 aaKnown RBP22.61■■□□□ 1.21
PABPN1-206ENST00000556809 C17orf53Q8N3J3 647 aaPredicted RBP22.61■■□□□ 1.21
PABPN1-206ENST00000556809 OXR1Q8N573 874 aa22.61■■□□□ 1.21
PABPN1-206ENST00000556809 SLC35B2Q8TB61 432 aa22.61■■□□□ 1.21
PABPN1-206ENST00000556809 PBKQ96KB5 322 aa22.61■■□□□ 1.21
PABPN1-206ENST00000556809 FRMD8P1Q9BZ68 369 aaPredicted RBP22.61■■□□□ 1.21
PABPN1-206ENST00000556809 KLHL8Q9P2G9 620 aaPredicted RBP22.61■■□□□ 1.21
PABPN1-206ENST00000556809 WASF3Q9UPY6 502 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms