RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 BMPR2Q13873 1038 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 BCL2A1Q16548 175 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 LACTB2Q53H82 288 aaPredicted RBP5.13□□□□□ -1.59
TMEM260-210ENST00000556422 DCAF6Q58WW2 860 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 RAB41Q5JT25 222 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 RNF220Q5VTB9 566 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 PDPK2PQ6A1A2 396 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 LRRC8BQ6P9F7 803 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 TCAIMQ8N3R3 496 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 CCDC197Q8NCU1 140 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 PSD4Q8NDX1 1056 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 FANK1Q8TC84 345 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 MAGEB18Q96M61 343 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 PRICKLE1Q96MT3 831 aaPredicted RBP5.13□□□□□ -1.59
TMEM260-210ENST00000556422 QKIQ96PU8 341 aaKnown RBP eCLIP5.13□□□□□ -1.594e-10■■■■■ 29.8
TMEM260-210ENST00000556422 TGS1Q96RS0 853 aaKnown RBP5.13□□□□□ -1.59
TMEM260-210ENST00000556422 HEPHQ9BQS7 1158 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 BTBD2Q9BX70 525 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 RHOBTB2Q9BYZ6 727 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 GHITMQ9H3K2 345 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 MBD2Q9UBB5 411 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 MAD1L1Q9Y6D9 718 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 PLXNA3P51805 1871 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 TET1Q8NFU7 2136 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 A0A0J9YVX5 310 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 CASTOR2A6NHX0 329 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 FAM72CH0Y354 149 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 AKAP10O43572 662 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 GCATO75600 419 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 THP07101 528 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 APRTP07741 180 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 EDN3P14138 238 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 ATF4P18848 351 aaPredicted RBP5.13□□□□□ -1.59
TMEM260-210ENST00000556422 ITGAXP20702 1163 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 G0S2P27469 103 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 TM4SF4P48230 202 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 GALK1P51570 392 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 RAB14P61106 215 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 PRKCZQ05513 592 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 NR1H3Q13133 447 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 SEMA3BQ13214 749 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 XRCC4Q13426 336 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 TIGD5Q53EQ6 642 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 EFHC1Q5JVL4 640 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 NDUFAF5Q5TEU4 345 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 FAM72AQ5TYM5 149 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 ZNF425Q6IV72 752 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 FAM72DQ6L9T8 149 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 TMC5Q6UXY8 1006 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 FAM35AQ86V20 835 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 FAM72BQ86X60 149 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 MPP5Q8N3R9 675 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 ZNF321PQ8N8H1 164 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 AVL9Q8NBF6 648 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 LRRC8CQ8TDW0 803 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 LGMNQ99538 433 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 SLC13A1Q9BZW2 595 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 C12orf65Q9H3J6 166 aaKnown RBP5.13□□□□□ -1.59
TMEM260-210ENST00000556422 STN1Q9H668 368 aaKnown RBP5.13□□□□□ -1.59
TMEM260-210ENST00000556422 MARCH7Q9H992 704 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 SAMD15Q9P1V8 674 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 FNIP2Q9P278 1114 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 ZMIZ1Q9ULJ6 1067 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 SLC12A4Q9UP95 1085 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 PRR23AA6NEV1 266 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 NUDT19A8MXV4 375 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 I3L4J1 428 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 SEPT4O43236 478 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 CA12O43570 354 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 ITGB1P05556 798 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 ASGR1P07306 291 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 SNRPAP09012 282 aaKnown RBP5.13□□□□□ -1.59
TMEM260-210ENST00000556422 TSHRP16473 764 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 KRT15P19012 456 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 CCND3P30281 292 aaPredicted RBP5.13□□□□□ -1.59
TMEM260-210ENST00000556422 CD52P31358 61 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 HNF4AP41235 474 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 HSPA13P48723 471 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 CLK3P49761 638 aaKnown RBP5.13□□□□□ -1.59
TMEM260-210ENST00000556422 MLLT6P55198 1093 aaPredicted RBP5.13□□□□□ -1.59
TMEM260-210ENST00000556422 DAOAP59103 153 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 HSPA14Q0VDF9 509 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 FLOT2Q14254 428 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 NCF4Q15080 339 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 FUT11Q495W5 492 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 FBXO48Q5FWF7 155 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 FAM209BQ5JX69 171 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 ZYG11AQ6WRX3 759 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 GALNTL5Q7Z4T8 443 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 MRPL10Q7Z7H8 261 aaKnown RBP5.13□□□□□ -1.59
TMEM260-210ENST00000556422 HID1Q8IV36 788 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 LILRB4Q8NHJ6 448 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 METTL6Q8TCB7 284 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 SLC44A1Q8WWI5 657 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 SMG7Q92540 1137 aaKnown RBP5.13□□□□□ -1.59
TMEM260-210ENST00000556422 RNF34Q969K3 372 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 SIGLEC10Q96LC7 697 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 PKMYT1Q99640 499 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 SYT15Q9BQS2 421 aa5.13□□□□□ -1.59
TMEM260-210ENST00000556422 HGH1Q9BTY7 390 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms