RNA–Protein interactions for RNA: ENST00000556274.5

ATXN3-237, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-237ENST00000556274 ZNF397Q8NF99 534 aaPredicted RBP4.82□□□□□ -1.64
ATXN3-237ENST00000556274 IPO4Q8TEX9 1081 aaKnown RBP4.82□□□□□ -1.64
ATXN3-237ENST00000556274 SLC20A1Q8WUM9 679 aa4.82□□□□□ -1.64
ATXN3-237ENST00000556274 SHC3Q92529 594 aa4.82□□□□□ -1.64
ATXN3-237ENST00000556274 DNASE1L2Q92874 299 aa4.82□□□□□ -1.64
ATXN3-237ENST00000556274 CD101Q93033 1021 aa4.82□□□□□ -1.64
ATXN3-237ENST00000556274 C18orf8Q96DM3 657 aa4.82□□□□□ -1.64
ATXN3-237ENST00000556274 CHFRQ96EP1 664 aa4.82□□□□□ -1.64
ATXN3-237ENST00000556274 HSFY1Q96LI6 401 aa4.82□□□□□ -1.64
ATXN3-237ENST00000556274 C20orf173Q96LM9 149 aa4.82□□□□□ -1.64
ATXN3-237ENST00000556274 CDK5RAP1Q96SZ6 601 aaKnown RBP4.82□□□□□ -1.64
ATXN3-237ENST00000556274 AGPAT1Q99943 283 aa4.82□□□□□ -1.64
ATXN3-237ENST00000556274 P2RY13Q9BPV8 354 aa4.82□□□□□ -1.64
ATXN3-237ENST00000556274 BBS2Q9BXC9 721 aa4.82□□□□□ -1.64
ATXN3-237ENST00000556274 FAM126AQ9BYI3 521 aaPredicted RBP4.82□□□□□ -1.64
ATXN3-237ENST00000556274 TRIM5Q9C035 493 aa4.82□□□□□ -1.64
ATXN3-237ENST00000556274 DCLK3Q9C098 648 aa4.82□□□□□ -1.64
ATXN3-237ENST00000556274 SIK2Q9H0K1 926 aa4.82□□□□□ -1.64
ATXN3-237ENST00000556274 FAM204AQ9H8W3 233 aa4.82□□□□□ -1.64
ATXN3-237ENST00000556274 PNPLA8Q9NP80 782 aa4.82□□□□□ -1.64
ATXN3-237ENST00000556274 LTB4R2Q9NPC1 389 aa4.82□□□□□ -1.64
ATXN3-237ENST00000556274 ZDHHC4Q9NPG8 344 aa4.82□□□□□ -1.64
ATXN3-237ENST00000556274 HPS4Q9NQG7 708 aa4.82□□□□□ -1.64
ATXN3-237ENST00000556274 CNGB3Q9NQW8 809 aa4.82□□□□□ -1.64
ATXN3-237ENST00000556274 OLA1Q9NTK5 396 aaKnown RBP4.82□□□□□ -1.64
ATXN3-237ENST00000556274 OBP2AQ9NY56 170 aa4.82□□□□□ -1.64
ATXN3-237ENST00000556274 IL37Q9NZH6 218 aa4.82□□□□□ -1.64
ATXN3-237ENST00000556274 KCMF1Q9P0J7 381 aa4.82□□□□□ -1.64
ATXN3-237ENST00000556274 SAE1Q9UBE0 346 aaPredicted RBP4.82□□□□□ -1.64
ATXN3-237ENST00000556274 SLC12A6Q9UHW9 1150 aa4.82□□□□□ -1.64
ATXN3-237ENST00000556274 CYTH4Q9UIA0 394 aa4.82□□□□□ -1.64
ATXN3-237ENST00000556274 ARHGAP26Q9UNA1 814 aa4.82□□□□□ -1.64
ATXN3-237ENST00000556274 GON4LQ3T8J9 2241 aa4.82□□□□□ -1.64
ATXN3-237ENST00000556274 COL4A2P08572 1712 aa4.82□□□□□ -1.64
ATXN3-237ENST00000556274 ZDBF2Q9HCK1 2354 aa4.82□□□□□ -1.64
ATXN3-237ENST00000556274 ZNF318Q5VUA4 2279 aa4.81□□□□□ -1.64
ATXN3-237ENST00000556274 F8VZ95 297 aa4.81□□□□□ -1.64
ATXN3-237ENST00000556274 EPHB6O15197 1021 aa4.81□□□□□ -1.64
ATXN3-237ENST00000556274 KDM1AO60341 852 aa4.81□□□□□ -1.64
ATXN3-237ENST00000556274 STC2O76061 302 aa4.81□□□□□ -1.64
ATXN3-237ENST00000556274 PCDH8O95206 1070 aa4.81□□□□□ -1.64
ATXN3-237ENST00000556274 CAVIN2O95810 425 aa4.81□□□□□ -1.64
ATXN3-237ENST00000556274 EGFP01133 1207 aa4.81□□□□□ -1.64
ATXN3-237ENST00000556274 ERBB2P04626 1255 aa4.81□□□□□ -1.64
ATXN3-237ENST00000556274 TPM1P09493 284 aa4.81□□□□□ -1.64
ATXN3-237ENST00000556274 ZDHHC11BP0C7U3 371 aa4.81□□□□□ -1.64
ATXN3-237ENST00000556274 GLULP15104 373 aa4.81□□□□□ -1.64
ATXN3-237ENST00000556274 FERP16591 822 aa4.81□□□□□ -1.64
ATXN3-237ENST00000556274 AOC1P19801 751 aa4.81□□□□□ -1.64
ATXN3-237ENST00000556274 WASP42768 502 aa4.81□□□□□ -1.64
ATXN3-237ENST00000556274 NUMBP49757 651 aa4.81□□□□□ -1.64
ATXN3-237ENST00000556274 MRE11P49959 708 aa4.81□□□□□ -1.64
ATXN3-237ENST00000556274 ZNF132P52740 706 aa4.81□□□□□ -1.64
ATXN3-237ENST00000556274 CDK17Q00537 523 aa4.81□□□□□ -1.64
ATXN3-237ENST00000556274 KLHL30Q0D2K2 578 aa4.81□□□□□ -1.64
ATXN3-237ENST00000556274 PCOLCEQ15113 449 aa4.81□□□□□ -1.64
ATXN3-237ENST00000556274 TAF5Q15542 800 aa4.81□□□□□ -1.64
ATXN3-237ENST00000556274 ZMAT1Q5H9K5 638 aa4.81□□□□□ -1.64
ATXN3-237ENST00000556274 RAB41Q5JT25 222 aa4.81□□□□□ -1.64
ATXN3-237ENST00000556274 FAM102AQ5T9C2 384 aaPredicted RBP4.81□□□□□ -1.64
ATXN3-237ENST00000556274 EMC10Q5UCC4 262 aa4.81□□□□□ -1.64
ATXN3-237ENST00000556274 SNX30Q5VWJ9 437 aa4.81□□□□□ -1.64
ATXN3-237ENST00000556274 SYPL2Q5VXT5 272 aa4.81□□□□□ -1.64
ATXN3-237ENST00000556274 NAIF1Q69YI7 327 aaPredicted RBP4.81□□□□□ -1.64
ATXN3-237ENST00000556274 RHBDF2Q6PJF5 856 aa4.81□□□□□ -1.64
ATXN3-237ENST00000556274 TSSK4Q6SA08 328 aa4.81□□□□□ -1.64
ATXN3-237ENST00000556274 MMS22LQ6ZRQ5 1243 aa4.81□□□□□ -1.64
ATXN3-237ENST00000556274 LHFPL2Q6ZUX7 228 aa4.81□□□□□ -1.64
ATXN3-237ENST00000556274 FAM183BPQ6ZVS7 135 aa4.81□□□□□ -1.64
ATXN3-237ENST00000556274 HTR3DQ70Z44 454 aa4.81□□□□□ -1.64
ATXN3-237ENST00000556274 UNC45BQ8IWX7 931 aa4.81□□□□□ -1.64
ATXN3-237ENST00000556274 DEFB106AQ8N104 65 aa4.81□□□□□ -1.64
ATXN3-237ENST00000556274 CFAP52Q8N1V2 620 aa4.81□□□□□ -1.64
ATXN3-237ENST00000556274 CLRN3Q8NCR9 226 aa4.81□□□□□ -1.64
ATXN3-237ENST00000556274 PJA1Q8NG27 643 aa4.81□□□□□ -1.64
ATXN3-237ENST00000556274 IRGQQ8WZA9 623 aa4.81□□□□□ -1.64
ATXN3-237ENST00000556274 TMA16Q96EY4 203 aaKnown RBP4.81□□□□□ -1.64
ATXN3-237ENST00000556274 XPO6Q96QU8 1125 aaKnown RBP4.81□□□□□ -1.64
ATXN3-237ENST00000556274 ERGIC2Q96RQ1 377 aa4.81□□□□□ -1.64
ATXN3-237ENST00000556274 CPXM1Q96SM3 734 aa4.81□□□□□ -1.64
ATXN3-237ENST00000556274 PNKPQ96T60 521 aa4.81□□□□□ -1.64
ATXN3-237ENST00000556274 FUCA2Q9BTY2 467 aa4.81□□□□□ -1.64
ATXN3-237ENST00000556274 NUP58Q9BVL2 599 aa4.81□□□□□ -1.64
ATXN3-237ENST00000556274 SELENOOQ9BVL4 669 aa4.81□□□□□ -1.64
ATXN3-237ENST00000556274 XPO4Q9C0E2 1151 aaKnown RBP4.81□□□□□ -1.64
ATXN3-237ENST00000556274 GANQ9H2C0 597 aa4.81□□□□□ -1.64
ATXN3-237ENST00000556274 LHX5Q9H2C1 402 aa4.81□□□□□ -1.64
ATXN3-237ENST00000556274 HSD3B7Q9H2F3 369 aa4.81□□□□□ -1.64
ATXN3-237ENST00000556274 MTG2Q9H4K7 406 aa4.81□□□□□ -1.64
ATXN3-237ENST00000556274 FBRSL1Q9HCM7 1045 aaKnown RBP4.81□□□□□ -1.64
ATXN3-237ENST00000556274 SPHK2Q9NRA0 654 aa4.81□□□□□ -1.64
ATXN3-237ENST00000556274 DNAJC17Q9NVM6 304 aaKnown RBP4.81□□□□□ -1.64
ATXN3-237ENST00000556274 CLIC5Q9NZA1 410 aa4.81□□□□□ -1.64
ATXN3-237ENST00000556274 WDR35Q9P2L0 1181 aa4.81□□□□□ -1.64
ATXN3-237ENST00000556274 DEC1Q9P2X7 70 aa4.81□□□□□ -1.64
ATXN3-237ENST00000556274 MYO1AQ9UBC5 1043 aa4.81□□□□□ -1.64
ATXN3-237ENST00000556274 MCM8Q9UJA3 840 aa4.81□□□□□ -1.64
ATXN3-237ENST00000556274 SLC8A2Q9UPR5 921 aa4.81□□□□□ -1.64
ATXN3-237ENST00000556274 CNTN6Q9UQ52 1028 aa4.81□□□□□ -1.64
ATXN3-237ENST00000556274 ZNF510Q9Y2H8 683 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms