RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 ITPKBP27987 946 aa9.22□□□□□ -0.93
GTF2A1-204ENST00000556268 ACADVLP49748 655 aa9.22□□□□□ -0.93
GTF2A1-204ENST00000556268 C21orf59P57076 290 aa9.22□□□□□ -0.93
GTF2A1-204ENST00000556268 TBX4P57082 545 aa9.22□□□□□ -0.93
GTF2A1-204ENST00000556268 RPS24P62847 133 aaKnown RBP9.22□□□□□ -0.93
GTF2A1-204ENST00000556268 RPL11P62913 178 aaKnown RBP9.22□□□□□ -0.93
GTF2A1-204ENST00000556268 IL9RQ01113 521 aa9.22□□□□□ -0.93
GTF2A1-204ENST00000556268 TARDBPQ13148 414 aaKnown RBP eCLIP9.22□□□□□ -0.93
GTF2A1-204ENST00000556268 ILKQ13418 452 aa9.22□□□□□ -0.93
GTF2A1-204ENST00000556268 EIF4EBP2Q13542 120 aaPredicted RBP9.22□□□□□ -0.93
GTF2A1-204ENST00000556268 INAVAQ3KP66 663 aa9.22□□□□□ -0.93
GTF2A1-204ENST00000556268 COBLL1Q53SF7 1204 aa9.22□□□□□ -0.93
GTF2A1-204ENST00000556268 MS4A13Q5J8X5 152 aa9.22□□□□□ -0.93
GTF2A1-204ENST00000556268 SFMBT2Q5VUG0 894 aa9.22□□□□□ -0.93
GTF2A1-204ENST00000556268 DENND5AQ6IQ26 1287 aa9.22□□□□□ -0.93
GTF2A1-204ENST00000556268 BEND5Q7L4P6 421 aa9.22□□□□□ -0.93
GTF2A1-204ENST00000556268 MMAAQ8IVH4 418 aaKnown RBP9.22□□□□□ -0.93
GTF2A1-204ENST00000556268 SIX6OS1Q8N1H7 587 aa9.22□□□□□ -0.93
GTF2A1-204ENST00000556268 AADATQ8N5Z0 425 aa9.22□□□□□ -0.93
GTF2A1-204ENST00000556268 HJURPQ8NCD3 748 aaPredicted RBP9.22□□□□□ -0.93
GTF2A1-204ENST00000556268 CNDP2Q96KP4 475 aaKnown RBP9.22□□□□□ -0.93
GTF2A1-204ENST00000556268 DDX50Q9BQ39 737 aaKnown RBP9.22□□□□□ -0.93
GTF2A1-204ENST00000556268 FBXL7Q9UJT9 491 aa9.22□□□□□ -0.93
GTF2A1-204ENST00000556268 ERVW-1Q9UQF0 538 aa9.22□□□□□ -0.93
GTF2A1-204ENST00000556268 ZDHHC9Q9Y397 364 aa9.22□□□□□ -0.93
GTF2A1-204ENST00000556268 RAI2Q9Y5P3 530 aa9.22□□□□□ -0.93
GTF2A1-204ENST00000556268 ITIH6Q6UXX5 1313 aa9.22□□□□□ -0.93
GTF2A1-204ENST00000556268 COL5A1P20908 1838 aaPredicted RBP9.21□□□□□ -0.93
GTF2A1-204ENST00000556268 EDDM13A0A1B0GTR0 161 aa9.21□□□□□ -0.94
GTF2A1-204ENST00000556268 TTC34A8MYJ7 566 aa9.21□□□□□ -0.94
GTF2A1-204ENST00000556268 C22orf46C9J442 243 aa9.21□□□□□ -0.94
GTF2A1-204ENST00000556268 CBX4O00257 560 aa9.21□□□□□ -0.94
GTF2A1-204ENST00000556268 TRIM13O60858 407 aa9.21□□□□□ -0.94
GTF2A1-204ENST00000556268 RFPL3O75679 317 aa9.21□□□□□ -0.94
GTF2A1-204ENST00000556268 C1QL1O75973 258 aa9.21□□□□□ -0.94
GTF2A1-204ENST00000556268 STK10O94804 968 aaKnown RBP9.21□□□□□ -0.94
GTF2A1-204ENST00000556268 ZNF202O95125 648 aa9.21□□□□□ -0.94
GTF2A1-204ENST00000556268 LTFP02788 710 aa9.21□□□□□ -0.94
GTF2A1-204ENST00000556268 INHBBP09529 407 aa9.21□□□□□ -0.94
GTF2A1-204ENST00000556268 EPB41P11171 864 aaKnown RBP9.21□□□□□ -0.94
GTF2A1-204ENST00000556268 C5AR1P21730 350 aa9.21□□□□□ -0.94
GTF2A1-204ENST00000556268 PLK1P53350 603 aa9.21□□□□□ -0.94
GTF2A1-204ENST00000556268 NXPH1P58417 271 aa9.21□□□□□ -0.94
GTF2A1-204ENST00000556268 ST8SIA6P61647 398 aa9.21□□□□□ -0.94
GTF2A1-204ENST00000556268 YWHAEP62258 255 aaKnown RBP9.21□□□□□ -0.94
GTF2A1-204ENST00000556268 FKBP3Q00688 224 aaKnown RBP9.21□□□□□ -0.94
GTF2A1-204ENST00000556268 ECT2LQ008S8 904 aa9.21□□□□□ -0.94
GTF2A1-204ENST00000556268 DNAJC3Q13217 504 aa9.21□□□□□ -0.94
GTF2A1-204ENST00000556268 STILQ15468 1287 aa9.21□□□□□ -0.94
GTF2A1-204ENST00000556268 TESK1Q15569 626 aa9.21□□□□□ -0.94
GTF2A1-204ENST00000556268 VMACQ2NL98 169 aa9.21□□□□□ -0.94
GTF2A1-204ENST00000556268 DCAF6Q58WW2 860 aa9.21□□□□□ -0.94
GTF2A1-204ENST00000556268 ANKRD40Q6AI12 368 aa9.21□□□□□ -0.94
GTF2A1-204ENST00000556268 MMS22LQ6ZRQ5 1243 aa9.21□□□□□ -0.94
GTF2A1-204ENST00000556268 IQCHQ86VS3 1027 aa9.21□□□□□ -0.94
GTF2A1-204ENST00000556268 SPATS2Q86XZ4 545 aaKnown RBP9.21□□□□□ -0.94
GTF2A1-204ENST00000556268 DCP2Q8IU60 420 aaKnown RBP9.21□□□□□ -0.94
GTF2A1-204ENST00000556268 MFN1Q8IWA4 741 aa9.21□□□□□ -0.94
GTF2A1-204ENST00000556268 DHX40Q8IX18 779 aaKnown RBP9.21□□□□□ -0.94
GTF2A1-204ENST00000556268 EID2Q8N6I1 236 aa9.21□□□□□ -0.94
GTF2A1-204ENST00000556268 LMO3Q8TAP4 145 aa9.21□□□□□ -0.94
GTF2A1-204ENST00000556268 SLC35C1Q96A29 364 aa9.21□□□□□ -0.94
GTF2A1-204ENST00000556268 PRICKLE1Q96MT3 831 aaPredicted RBP9.21□□□□□ -0.94
GTF2A1-204ENST00000556268 OMDQ99983 421 aa9.21□□□□□ -0.94
GTF2A1-204ENST00000556268 TRIM55Q9BYV6 548 aa9.21□□□□□ -0.94
GTF2A1-204ENST00000556268 GDF3Q9NR23 364 aa9.21□□□□□ -0.94
GTF2A1-204ENST00000556268 SHROOM3Q8TF72 1996 aa9.21□□□□□ -0.94
GTF2A1-204ENST00000556268 CFAP46Q8IYW2 2715 aa9.2□□□□□ -0.94
GTF2A1-204ENST00000556268 MUC22E2RYF6 1773 aaPredicted RBP9.2□□□□□ -0.94
GTF2A1-204ENST00000556268 TMEM131Q92545 1883 aa9.2□□□□□ -0.94
GTF2A1-204ENST00000556268 FAM47DPA6NHR8 397 aa9.2□□□□□ -0.94
GTF2A1-204ENST00000556268 EIF4E1BA6NMX2 242 aaKnown RBP9.2□□□□□ -0.94
GTF2A1-204ENST00000556268 SLC16A3O15427 465 aaKnown RBP9.2□□□□□ -0.94
GTF2A1-204ENST00000556268 RNASEH2AO75792 299 aaKnown RBP9.2□□□□□ -0.94
GTF2A1-204ENST00000556268 FBXO21O94952 628 aa9.2□□□□□ -0.94
GTF2A1-204ENST00000556268 CD19P15391 556 aa9.2□□□□□ -0.94
GTF2A1-204ENST00000556268 CKMT2P17540 419 aa9.2□□□□□ -0.94
GTF2A1-204ENST00000556268 BMP7P18075 431 aa9.2□□□□□ -0.94
GTF2A1-204ENST00000556268 ABCB4P21439 1286 aa9.2□□□□□ -0.94
GTF2A1-204ENST00000556268 TBXAS1P24557 533 aaPredicted RBP9.2□□□□□ -0.94
GTF2A1-204ENST00000556268 ACP1P24666 158 aa9.2□□□□□ -0.94
GTF2A1-204ENST00000556268 EPHA8P29322 1005 aaPredicted RBP9.2□□□□□ -0.94
GTF2A1-204ENST00000556268 HNF1BP35680 557 aa9.2□□□□□ -0.94
GTF2A1-204ENST00000556268 NUDT1P36639 197 aa9.2□□□□□ -0.94
GTF2A1-204ENST00000556268 BCL6P41182 706 aa9.2□□□□□ -0.94
GTF2A1-204ENST00000556268 PRCPP42785 496 aa9.2□□□□□ -0.94
GTF2A1-204ENST00000556268 ABCG1P45844 678 aa9.2□□□□□ -0.94
GTF2A1-204ENST00000556268 RGS7P49802 495 aa9.2□□□□□ -0.94
GTF2A1-204ENST00000556268 ADPRHP54922 357 aa9.2□□□□□ -0.94
GTF2A1-204ENST00000556268 OVGP1Q12889 678 aa9.2□□□□□ -0.94
GTF2A1-204ENST00000556268 SLC12A1Q13621 1099 aa9.2□□□□□ -0.94
GTF2A1-204ENST00000556268 SLC9A5Q14940 896 aa9.2□□□□□ -0.94
GTF2A1-204ENST00000556268 CCDC157Q569K6 752 aa9.2□□□□□ -0.94
GTF2A1-204ENST00000556268 PITRM1Q5JRX3 1037 aa9.2□□□□□ -0.94
GTF2A1-204ENST00000556268 SLC35F1Q5T1Q4 408 aa9.2□□□□□ -0.94
GTF2A1-204ENST00000556268 SYPL2Q5VXT5 272 aa9.2□□□□□ -0.94
GTF2A1-204ENST00000556268 APCDD1Q8J025 514 aa9.2□□□□□ -0.94
GTF2A1-204ENST00000556268 CFAP52Q8N1V2 620 aa9.2□□□□□ -0.94
GTF2A1-204ENST00000556268 STK40Q8N2I9 435 aa9.2□□□□□ -0.94
GTF2A1-204ENST00000556268 SLC25A45Q8N413 288 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms