RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 SLC13A1Q9BZW2 595 aa8.37□□□□□ -1.07
ATXN3-235ENST00000556082 RHOJQ9H4E5 214 aa8.37□□□□□ -1.07
ATXN3-235ENST00000556082 NT5MQ9NPB1 228 aa8.37□□□□□ -1.07
ATXN3-235ENST00000556082 ANKRD6Q9Y2G4 727 aa8.37□□□□□ -1.07
ATXN3-235ENST00000556082 ZNF510Q9Y2H8 683 aa8.37□□□□□ -1.07
ATXN3-235ENST00000556082 INSL6Q9Y581 213 aa8.37□□□□□ -1.07
ATXN3-235ENST00000556082 USH1CQ9Y6N9 552 aa8.37□□□□□ -1.07
ATXN3-235ENST00000556082 NUP205Q92621 2012 aa8.36□□□□□ -1.07
ATXN3-235ENST00000556082 SLC7A4O43246 635 aa8.36□□□□□ -1.07
ATXN3-235ENST00000556082 TGM5O43548 720 aa8.36□□□□□ -1.07
ATXN3-235ENST00000556082 PLIN3O60664 434 aa8.36□□□□□ -1.07
ATXN3-235ENST00000556082 SNNO75324 88 aaPredicted RBP8.36□□□□□ -1.07
ATXN3-235ENST00000556082 FGF1P05230 155 aa8.36□□□□□ -1.07
ATXN3-235ENST00000556082 APOA4P06727 396 aa8.36□□□□□ -1.07
ATXN3-235ENST00000556082 CNPP09543 421 aaKnown RBP8.36□□□□□ -1.07
ATXN3-235ENST00000556082 ATXN1LP0C7T5 689 aaKnown RBP8.36□□□□□ -1.07
ATXN3-235ENST00000556082 TROVE2P10155 538 aaKnown RBP eCLIP8.36□□□□□ -1.07
ATXN3-235ENST00000556082 ACRP10323 421 aa8.36□□□□□ -1.07
ATXN3-235ENST00000556082 CR2P20023 1033 aa8.36□□□□□ -1.07
ATXN3-235ENST00000556082 ARNTP27540 789 aa8.36□□□□□ -1.07
ATXN3-235ENST00000556082 OXCT1P55809 520 aa8.36□□□□□ -1.07
ATXN3-235ENST00000556082 RPS24P62847 133 aaKnown RBP8.36□□□□□ -1.07
ATXN3-235ENST00000556082 SLC7A9P82251 487 aa8.36□□□□□ -1.07
ATXN3-235ENST00000556082 DSC2Q02487 901 aa8.36□□□□□ -1.07
ATXN3-235ENST00000556082 ACVR1Q04771 509 aa8.36□□□□□ -1.07
ATXN3-235ENST00000556082 NSUN2Q08J23 767 aaKnown RBP eCLIP8.36□□□□□ -1.07
ATXN3-235ENST00000556082 IHHQ14623 411 aa8.36□□□□□ -1.07
ATXN3-235ENST00000556082 POU6F1Q14863 301 aa8.36□□□□□ -1.07
ATXN3-235ENST00000556082 CCDC153Q494R4 210 aa8.36□□□□□ -1.07
ATXN3-235ENST00000556082 RALGPS1Q5JS13 557 aa8.36□□□□□ -1.07
ATXN3-235ENST00000556082 MPP7Q5T2T1 576 aa8.36□□□□□ -1.07
ATXN3-235ENST00000556082 TSTD2Q5T7W7 516 aa8.36□□□□□ -1.07
ATXN3-235ENST00000556082 RNF187Q5TA31 235 aaPredicted RBP8.36□□□□□ -1.07
ATXN3-235ENST00000556082 FYB2Q5VWT5 728 aa8.36□□□□□ -1.07
ATXN3-235ENST00000556082 FAM117BQ6P1L5 589 aa8.36□□□□□ -1.07
ATXN3-235ENST00000556082 RFWD3Q6PCD5 774 aa8.36□□□□□ -1.07
ATXN3-235ENST00000556082 FAM47EQ6ZV65 393 aa8.36□□□□□ -1.07
ATXN3-235ENST00000556082 HTR3DQ70Z44 454 aa8.36□□□□□ -1.07
ATXN3-235ENST00000556082 CCDC91Q7Z6B0 441 aa8.36□□□□□ -1.07
ATXN3-235ENST00000556082 TMCO2Q7Z6W1 182 aaPredicted RBP8.36□□□□□ -1.07
ATXN3-235ENST00000556082 CLEC14AQ86T13 490 aa8.36□□□□□ -1.07
ATXN3-235ENST00000556082 ZC3HC1Q86WB0 502 aaKnown RBP8.36□□□□□ -1.07
ATXN3-235ENST00000556082 NUDCD3Q8IVD9 361 aa8.36□□□□□ -1.07
ATXN3-235ENST00000556082 CFAP52Q8N1V2 620 aa8.36□□□□□ -1.07
ATXN3-235ENST00000556082 DCLK2Q8N568 766 aa8.36□□□□□ -1.07
ATXN3-235ENST00000556082 CCDC63Q8NA47 563 aa8.36□□□□□ -1.07
ATXN3-235ENST00000556082 C2CD4AQ8NCU7 369 aaPredicted RBP8.36□□□□□ -1.07
ATXN3-235ENST00000556082 CALML6Q8TD86 181 aa8.36□□□□□ -1.07
ATXN3-235ENST00000556082 NUDT8Q8WV74 236 aa8.36□□□□□ -1.07
ATXN3-235ENST00000556082 PTPRN2Q92932 1015 aa8.36□□□□□ -1.07
ATXN3-235ENST00000556082 E2F7Q96AV8 911 aa8.36□□□□□ -1.07
ATXN3-235ENST00000556082 PRICKLE1Q96MT3 831 aaPredicted RBP8.36□□□□□ -1.07
ATXN3-235ENST00000556082 ZNF778Q96MU6 729 aa8.36□□□□□ -1.07
ATXN3-235ENST00000556082 KLHL5Q96PQ7 755 aa8.36□□□□□ -1.07
ATXN3-235ENST00000556082 AGAP2Q99490 1192 aa8.36□□□□□ -1.07
ATXN3-235ENST00000556082 RAD9AQ99638 391 aa8.36□□□□□ -1.07
ATXN3-235ENST00000556082 SEMA3CQ99985 751 aa8.36□□□□□ -1.07
ATXN3-235ENST00000556082 SIKE1Q9BRV8 207 aa8.36□□□□□ -1.07
ATXN3-235ENST00000556082 TSSK1BQ9BXA7 367 aa8.36□□□□□ -1.07
ATXN3-235ENST00000556082 SLCO1B3Q9NPD5 702 aa8.36□□□□□ -1.07
ATXN3-235ENST00000556082 SNX15Q9NRS6 342 aa8.36□□□□□ -1.07
ATXN3-235ENST00000556082 GKN1Q9NS71 199 aa8.36□□□□□ -1.07
ATXN3-235ENST00000556082 IARS2Q9NSE4 1012 aaKnown RBP8.36□□□□□ -1.07
ATXN3-235ENST00000556082 PCMTD2Q9NV79 361 aa8.36□□□□□ -1.07
ATXN3-235ENST00000556082 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.36□□□□□ -1.07
ATXN3-235ENST00000556082 EMCNQ9ULC0 261 aa8.36□□□□□ -1.07
ATXN3-235ENST00000556082 SLC12A4Q9UP95 1085 aa8.36□□□□□ -1.07
ATXN3-235ENST00000556082 MTO1Q9Y2Z2 717 aaKnown RBP8.36□□□□□ -1.07
ATXN3-235ENST00000556082 MYO16Q9Y6X6 1858 aa8.36□□□□□ -1.07
ATXN3-235ENST00000556082 ZNF638Q14966 1978 aaKnown RBP8.35□□□□□ -1.07
ATXN3-235ENST00000556082 A0A0D9SEW6 157 aa8.35□□□□□ -1.07
ATXN3-235ENST00000556082 WDR91A4D1P6 747 aa8.35□□□□□ -1.07
ATXN3-235ENST00000556082 C2orf78A6NCI8 922 aa8.35□□□□□ -1.07
ATXN3-235ENST00000556082 MUSKO15146 869 aa8.35□□□□□ -1.07
ATXN3-235ENST00000556082 ZMPSTE24O75844 475 aa8.35□□□□□ -1.07
ATXN3-235ENST00000556082 DCTN3O75935 186 aa8.35□□□□□ -1.07
ATXN3-235ENST00000556082 DNAJC8O75937 253 aaPredicted RBP8.35□□□□□ -1.07
ATXN3-235ENST00000556082 ATP5HO75947 161 aa8.35□□□□□ -1.07
ATXN3-235ENST00000556082 VAPBO95292 243 aa8.35□□□□□ -1.07
ATXN3-235ENST00000556082 CXCL14O95715 111 aa8.35□□□□□ -1.07
ATXN3-235ENST00000556082 FGF19O95750 216 aa8.35□□□□□ -1.07
ATXN3-235ENST00000556082 NDST3O95803 873 aa8.35□□□□□ -1.07
ATXN3-235ENST00000556082 AHSGP02765 367 aa8.35□□□□□ -1.07
ATXN3-235ENST00000556082 PRKCGP05129 697 aa8.35□□□□□ -1.07
ATXN3-235ENST00000556082 ATP5BP06576 529 aaKnown RBP8.35□□□□□ -1.07
ATXN3-235ENST00000556082 C2P06681 752 aa8.35□□□□□ -1.07
ATXN3-235ENST00000556082 RHOCP08134 193 aa8.35□□□□□ -1.07
ATXN3-235ENST00000556082 SERPINF2P08697 491 aa8.35□□□□□ -1.07
ATXN3-235ENST00000556082 MBL2P11226 248 aaPredicted RBP8.35□□□□□ -1.07
ATXN3-235ENST00000556082 HDCP19113 662 aa8.35□□□□□ -1.07
ATXN3-235ENST00000556082 BGNP21810 368 aa8.35□□□□□ -1.07
ATXN3-235ENST00000556082 GRK2P25098 689 aa8.35□□□□□ -1.07
ATXN3-235ENST00000556082 GABRB3P28472 473 aa8.35□□□□□ -1.07
ATXN3-235ENST00000556082 CRABP2P29373 138 aa8.35□□□□□ -1.07
ATXN3-235ENST00000556082 SKIV2L2P42285 1042 aaKnown RBP8.35□□□□□ -1.07
ATXN3-235ENST00000556082 LEPRP48357 1165 aaKnown RBP8.35□□□□□ -1.07
ATXN3-235ENST00000556082 PRKAA2P54646 552 aa8.35□□□□□ -1.07
ATXN3-235ENST00000556082 SMAD3P84022 425 aaKnown RBP8.35□□□□□ -1.07
ATXN3-235ENST00000556082 OCRLQ01968 901 aa8.35□□□□□ -1.07
ATXN3-235ENST00000556082 FPGSQ05932 587 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms