RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 EBNA1BP2Q99848 306 aaKnown RBP11.09□□□□□ -0.63
TMEM260-208ENST00000555905 FOXQ1Q9C009 403 aa11.09□□□□□ -0.63
TMEM260-208ENST00000555905 TRABDQ9H4I3 376 aa11.09□□□□□ -0.63
TMEM260-208ENST00000555905 MAGEE1Q9HCI5 957 aa11.09□□□□□ -0.63
TMEM260-208ENST00000555905 CD320Q9NPF0 282 aa11.09□□□□□ -0.63
TMEM260-208ENST00000555905 HACD3Q9P035 362 aa11.09□□□□□ -0.63
TMEM260-208ENST00000555905 ZC3H7BQ9UGR2 993 aaKnown RBP11.09□□□□□ -0.63
TMEM260-208ENST00000555905 SARDHQ9UL12 918 aa11.09□□□□□ -0.63
TMEM260-208ENST00000555905 CHMP2BQ9UQN3 213 aa11.09□□□□□ -0.63
TMEM260-208ENST00000555905 MYLKQ15746 1914 aa11.08□□□□□ -0.64
TMEM260-208ENST00000555905 A0A0J9YYE9 177 aa11.08□□□□□ -0.64
TMEM260-208ENST00000555905 A0A1W2PQF6 199 aa11.08□□□□□ -0.64
TMEM260-208ENST00000555905 C2orf81A6NN90 581 aa11.08□□□□□ -0.64
TMEM260-208ENST00000555905 C16orf96A6NNT2 1141 aa11.08□□□□□ -0.64
TMEM260-208ENST00000555905 UPK3BL1B0FP48 263 aa11.08□□□□□ -0.64
TMEM260-208ENST00000555905 CHURC1-FNTBB4DL54 471 aa11.08□□□□□ -0.64
TMEM260-208ENST00000555905 UPK3BL2E5RIL1 263 aa11.08□□□□□ -0.64
TMEM260-208ENST00000555905 TTC4O95801 387 aa11.08□□□□□ -0.64
TMEM260-208ENST00000555905 TRBC1P01850 177 aa11.08□□□□□ -0.64
TMEM260-208ENST00000555905 POLBP06746 335 aa11.08□□□□□ -0.64
TMEM260-208ENST00000555905 PIRTP0C851 137 aa11.08□□□□□ -0.64
TMEM260-208ENST00000555905 TSHRP16473 764 aa11.08□□□□□ -0.64
TMEM260-208ENST00000555905 CTPS1P17812 591 aa11.08□□□□□ -0.64
TMEM260-208ENST00000555905 PGAM1P18669 254 aa11.08□□□□□ -0.64
TMEM260-208ENST00000555905 C5AR1P21730 350 aa11.08□□□□□ -0.64
TMEM260-208ENST00000555905 SLC8A1P32418 973 aa11.08□□□□□ -0.64
TMEM260-208ENST00000555905 ABL2P42684 1182 aa11.08□□□□□ -0.64
TMEM260-208ENST00000555905 SUOXP51687 545 aa11.08□□□□□ -0.64
TMEM260-208ENST00000555905 PDE1BQ01064 536 aa11.08□□□□□ -0.64
TMEM260-208ENST00000555905 SATB1Q01826 763 aa11.08□□□□□ -0.64
TMEM260-208ENST00000555905 CCDC15Q0P6D6 951 aa11.08□□□□□ -0.64
TMEM260-208ENST00000555905 CST6Q15828 149 aa11.08□□□□□ -0.64
TMEM260-208ENST00000555905 UGP2Q16851 508 aa11.08□□□□□ -0.64
TMEM260-208ENST00000555905 SPDYCQ5MJ68 293 aa11.08□□□□□ -0.64
TMEM260-208ENST00000555905 BEND6Q5SZJ8 279 aaPredicted RBP11.08□□□□□ -0.64
TMEM260-208ENST00000555905 KIAA1211LQ6NV74 962 aa11.08□□□□□ -0.64
TMEM260-208ENST00000555905 ERAP2Q6P179 960 aa11.08□□□□□ -0.64
TMEM260-208ENST00000555905 PKN3Q6P5Z2 889 aa11.08□□□□□ -0.64
TMEM260-208ENST00000555905 FBXL19Q6PCT2 694 aa11.08□□□□□ -0.64
TMEM260-208ENST00000555905 FBXO38Q6PIJ6 1188 aa11.08□□□□□ -0.64
TMEM260-208ENST00000555905 NLRP9Q7RTR0 991 aa11.08□□□□□ -0.64
TMEM260-208ENST00000555905 GLT6D1Q7Z4J2 308 aa11.08□□□□□ -0.64
TMEM260-208ENST00000555905 TTC7BQ86TV6 843 aa11.08□□□□□ -0.64
TMEM260-208ENST00000555905 IGDCC3Q8IVU1 814 aa11.08□□□□□ -0.64
TMEM260-208ENST00000555905 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.08□□□□□ -0.64
TMEM260-208ENST00000555905 MREGQ8N565 214 aa11.08□□□□□ -0.64
TMEM260-208ENST00000555905 BRSK1Q8TDC3 778 aa11.08□□□□□ -0.64
TMEM260-208ENST00000555905 UBLCP1Q8WVY7 318 aaPredicted RBP11.08□□□□□ -0.64
TMEM260-208ENST00000555905 VOPP1Q96AW1 172 aa11.08□□□□□ -0.64
TMEM260-208ENST00000555905 C9orf72Q96LT7 481 aa11.08□□□□□ -0.64
TMEM260-208ENST00000555905 NECAB3Q96P71 396 aaPredicted RBP11.08□□□□□ -0.64
TMEM260-208ENST00000555905 KIFC1Q9BW19 673 aa11.08□□□□□ -0.64
TMEM260-208ENST00000555905 TXLNGYQ9BZA5 131 aa11.08□□□□□ -0.64
TMEM260-208ENST00000555905 OSBPL6Q9BZF3 934 aa11.08□□□□□ -0.64
TMEM260-208ENST00000555905 CDC42EP4Q9H3Q1 356 aaKnown RBP11.08□□□□□ -0.64
TMEM260-208ENST00000555905 SEMA4AQ9H3S1 761 aa11.08□□□□□ -0.64
TMEM260-208ENST00000555905 MRM3Q9HC36 420 aaKnown RBP11.08□□□□□ -0.64
TMEM260-208ENST00000555905 NINJ2Q9NZG7 142 aa11.08□□□□□ -0.64
TMEM260-208ENST00000555905 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.08□□□□□ -0.64
TMEM260-208ENST00000555905 SOX13Q9UN79 622 aa11.08□□□□□ -0.64
TMEM260-208ENST00000555905 MTF2Q9Y483 593 aaPredicted RBP11.08□□□□□ -0.64
TMEM260-208ENST00000555905 TCAF1Q9Y4C2 921 aa11.08□□□□□ -0.64
TMEM260-208ENST00000555905 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.08□□□□□ -0.64
TMEM260-208ENST00000555905 FAM237BA0A1B0GVD1 139 aa11.07□□□□□ -0.64
TMEM260-208ENST00000555905 CAPN8A6NHC0 703 aa11.07□□□□□ -0.64
TMEM260-208ENST00000555905 SPAG6O75602 509 aa11.07□□□□□ -0.64
TMEM260-208ENST00000555905 SLC34A2O95436 690 aa11.07□□□□□ -0.64
TMEM260-208ENST00000555905 ACSL3O95573 720 aa11.07□□□□□ -0.64
TMEM260-208ENST00000555905 DNTTP04053 509 aa11.07□□□□□ -0.64
TMEM260-208ENST00000555905 GSTA2P09210 222 aa11.07□□□□□ -0.64
TMEM260-208ENST00000555905 ALPIP09923 528 aa11.07□□□□□ -0.64
TMEM260-208ENST00000555905 CYP2A6P11509 494 aaPredicted RBP11.07□□□□□ -0.64
TMEM260-208ENST00000555905 TIMP2P16035 220 aa11.07□□□□□ -0.64
TMEM260-208ENST00000555905 PHBP35232 272 aa11.07□□□□□ -0.64
TMEM260-208ENST00000555905 HNF1BP35680 557 aa11.07□□□□□ -0.64
TMEM260-208ENST00000555905 NEK3P51956 506 aa11.07□□□□□ -0.64
TMEM260-208ENST00000555905 DGKEP52429 567 aa11.07□□□□□ -0.64
TMEM260-208ENST00000555905 COPAP53621 1224 aa11.07□□□□□ -0.64
TMEM260-208ENST00000555905 RPS14P62263 151 aaKnown RBP11.07□□□□□ -0.64
TMEM260-208ENST00000555905 FAM193AP78312 1265 aa11.07□□□□□ -0.64
TMEM260-208ENST00000555905 SFSWAPQ12872 951 aaKnown RBP11.07□□□□□ -0.64
TMEM260-208ENST00000555905 TAF1AQ15573 450 aaPredicted RBP11.07□□□□□ -0.64
TMEM260-208ENST00000555905 KYNUQ16719 465 aa11.07□□□□□ -0.64
TMEM260-208ENST00000555905 SPANXN3Q5MJ09 141 aa11.07□□□□□ -0.64
TMEM260-208ENST00000555905 Q6ZS52 159 aa11.07□□□□□ -0.64
TMEM260-208ENST00000555905 C3orf62Q6ZUJ4 267 aa11.07□□□□□ -0.64
TMEM260-208ENST00000555905 ERN2Q76MJ5 926 aaKnown RBP11.07□□□□□ -0.64
TMEM260-208ENST00000555905 SYT13Q7L8C5 426 aa11.07□□□□□ -0.64
TMEM260-208ENST00000555905 ZSWIM9Q86XI8 627 aa11.07□□□□□ -0.64
TMEM260-208ENST00000555905 TMPRSS6Q8IU80 811 aa11.07□□□□□ -0.64
TMEM260-208ENST00000555905 AGGF1Q8N302 714 aaeCLIP11.07□□□□□ -0.64
TMEM260-208ENST00000555905 PJA1Q8NG27 643 aa11.07□□□□□ -0.64
TMEM260-208ENST00000555905 ANKRD7Q92527 254 aa11.07□□□□□ -0.64
TMEM260-208ENST00000555905 SCRN2Q96FV2 425 aa11.07□□□□□ -0.64
TMEM260-208ENST00000555905 UHRF1Q96T88 793 aaPredicted RBP11.07□□□□□ -0.64
TMEM260-208ENST00000555905 HDAC8Q9BY41 377 aa11.07□□□□□ -0.64
TMEM260-208ENST00000555905 GPR63Q9BZJ6 419 aa11.07□□□□□ -0.64
TMEM260-208ENST00000555905 PABPC3Q9H361 631 aaKnown RBP11.07□□□□□ -0.64
TMEM260-208ENST00000555905 MFSD1Q9H3U5 465 aa11.07□□□□□ -0.64
TMEM260-208ENST00000555905 VPS37BQ9H9H4 285 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms