RNA–Protein interactions for RNA: ENST00000555648.1

SNX6-205, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-205ENST00000555648 ZSWIM9Q86XI8 627 aa15.51■□□□□ 0.07
SNX6-205ENST00000555648 SDR16C5Q8N3Y7 309 aa15.51■□□□□ 0.07
SNX6-205ENST00000555648 SNIP1Q8TAD8 396 aaKnown RBP15.51■□□□□ 0.07
SNX6-205ENST00000555648 GRAMD1AQ96CP6 724 aa15.51■□□□□ 0.07
SNX6-205ENST00000555648 CSPG4P5Q96PW8 444 aa15.51■□□□□ 0.07
SNX6-205ENST00000555648 BOCQ9BWV1 1114 aa15.51■□□□□ 0.07
SNX6-205ENST00000555648 HAUS2Q9NVX0 235 aa15.51■□□□□ 0.07
SNX6-205ENST00000555648 SIRPGQ9P1W8 387 aa15.51■□□□□ 0.07
SNX6-205ENST00000555648 MOSPD1Q9UJG1 213 aa15.51■□□□□ 0.07
SNX6-205ENST00000555648 PADI4Q9UM07 663 aa15.51■□□□□ 0.07
SNX6-205ENST00000555648 CAPN11Q9UMQ6 739 aa15.51■□□□□ 0.07
SNX6-205ENST00000555648 U3KQA8 63 aa15.51■□□□□ 0.07
SNX6-205ENST00000555648 KNTC1P50748 2209 aa15.51■□□□□ 0.07
SNX6-205ENST00000555648 TP53BP1Q12888 1972 aaPredicted RBP15.5■□□□□ 0.07
SNX6-205ENST00000555648 A8MX80 341 aa15.5■□□□□ 0.07
SNX6-205ENST00000555648 PDE2AO00408 941 aaPredicted RBP15.5■□□□□ 0.07
SNX6-205ENST00000555648 TLX3O43711 291 aaPredicted RBP15.5■□□□□ 0.07
SNX6-205ENST00000555648 KRT10P13645 584 aa15.5■□□□□ 0.07
SNX6-205ENST00000555648 RBMS1P29558 406 aaKnown RBP15.5■□□□□ 0.07
SNX6-205ENST00000555648 CDH6P55285 790 aa15.5■□□□□ 0.07
SNX6-205ENST00000555648 ITKQ08881 620 aa15.5■□□□□ 0.07
SNX6-205ENST00000555648 CCDC173Q0VFZ6 552 aa15.5■□□□□ 0.07
SNX6-205ENST00000555648 AGERQ15109 404 aa15.5■□□□□ 0.07
SNX6-205ENST00000555648 ISXQ2M1V0 245 aa15.5■□□□□ 0.07
SNX6-205ENST00000555648 ZFYVE27Q5T4F4 411 aa15.5■□□□□ 0.07
SNX6-205ENST00000555648 MARC1Q5VT66 337 aa15.5■□□□□ 0.07
SNX6-205ENST00000555648 HGSNATQ68CP4 663 aa15.5■□□□□ 0.07
SNX6-205ENST00000555648 LIPIQ6XZB0 460 aa15.5■□□□□ 0.07
SNX6-205ENST00000555648 DPPA4Q7L190 304 aa15.5■□□□□ 0.07
SNX6-205ENST00000555648 SLC35F3Q8IY50 421 aa15.5■□□□□ 0.07
SNX6-205ENST00000555648 NDUFAF2Q8N183 169 aa15.5■□□□□ 0.07
SNX6-205ENST00000555648 ARL10Q8N8L6 244 aa15.5■□□□□ 0.07
SNX6-205ENST00000555648 NIPA2Q8N8Q9 360 aa15.5■□□□□ 0.07
SNX6-205ENST00000555648 ECHDC3Q96DC8 303 aa15.5■□□□□ 0.07
SNX6-205ENST00000555648 BTBD6Q96KE9 485 aa15.5■□□□□ 0.07
SNX6-205ENST00000555648 ZNF578Q96N58 590 aaPredicted RBP15.5■□□□□ 0.07
SNX6-205ENST00000555648 LGMNQ99538 433 aa15.5■□□□□ 0.07
SNX6-205ENST00000555648 CLPBQ9H078 707 aa15.5■□□□□ 0.07
SNX6-205ENST00000555648 POLR1BQ9H9Y6 1135 aa15.5■□□□□ 0.07
SNX6-205ENST00000555648 PCDH18Q9HCL0 1135 aa15.5■□□□□ 0.07
SNX6-205ENST00000555648 KCTD5Q9NXV2 234 aa15.5■□□□□ 0.07
SNX6-205ENST00000555648 IFNKQ9P0W0 207 aa15.5■□□□□ 0.07
SNX6-205ENST00000555648 GPR34Q9UPC5 381 aa15.5■□□□□ 0.07
SNX6-205ENST00000555648 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.5■□□□□ 0.072e-6■■■■□ 19.3
SNX6-205ENST00000555648 AKAP13Q12802 2813 aa15.49■□□□□ 0.07
SNX6-205ENST00000555648 APC2O95996 2303 aa15.49■□□□□ 0.07
SNX6-205ENST00000555648 ACACAQ13085 2346 aa15.49■□□□□ 0.07
SNX6-205ENST00000555648 PKD1L2Q7Z442 2459 aa15.49■□□□□ 0.07
SNX6-205ENST00000555648 URB1O60287 2271 aaKnown RBP15.49■□□□□ 0.07
SNX6-205ENST00000555648 A0A087X0T9 212 aa15.49■□□□□ 0.07
SNX6-205ENST00000555648 SOCS5O75159 536 aa15.49■□□□□ 0.07
SNX6-205ENST00000555648 TCEA3O75764 348 aa15.49■□□□□ 0.07
SNX6-205ENST00000555648 CPP00450 1065 aa15.49■□□□□ 0.07
SNX6-205ENST00000555648 CYP1A2P05177 515 aa15.49■□□□□ 0.07
SNX6-205ENST00000555648 FAM228BP0C875 321 aa15.49■□□□□ 0.07
SNX6-205ENST00000555648 CYP2A6P11509 494 aaPredicted RBP15.49■□□□□ 0.07
SNX6-205ENST00000555648 TGM2P21980 687 aa15.49■□□□□ 0.07
SNX6-205ENST00000555648 GJC1P36383 396 aa15.49■□□□□ 0.07
SNX6-205ENST00000555648 MMP13P45452 471 aa15.49■□□□□ 0.07
SNX6-205ENST00000555648 LSSP48449 732 aa15.49■□□□□ 0.07
SNX6-205ENST00000555648 PCBP4P57723 403 aaKnown RBP15.49■□□□□ 0.07
SNX6-205ENST00000555648 SPIDRQ14159 915 aa15.49■□□□□ 0.07
SNX6-205ENST00000555648 TSR1Q2NL82 804 aaKnown RBP15.49■□□□□ 0.07
SNX6-205ENST00000555648 BROXQ5VW32 411 aa15.49■□□□□ 0.07
SNX6-205ENST00000555648 DENND2CQ68D51 928 aa15.49■□□□□ 0.07
SNX6-205ENST00000555648 TAF8Q7Z7C8 310 aa15.49■□□□□ 0.07
SNX6-205ENST00000555648 LRRC49Q8IUZ0 686 aa15.49■□□□□ 0.07
SNX6-205ENST00000555648 TP53INP2Q8IXH6 220 aa15.49■□□□□ 0.07
SNX6-205ENST00000555648 ZNF248Q8NDW4 579 aa15.49■□□□□ 0.07
SNX6-205ENST00000555648 OR6C4Q8NGE1 309 aa15.49■□□□□ 0.07
SNX6-205ENST00000555648 OR56A4Q8NGH8 313 aa15.49■□□□□ 0.07
SNX6-205ENST00000555648 PCDH19Q8TAB3 1148 aa15.49■□□□□ 0.07
SNX6-205ENST00000555648 NUDCD1Q96RS6 583 aa15.49■□□□□ 0.07
SNX6-205ENST00000555648 CCDC3Q9BQI4 270 aa15.49■□□□□ 0.07
SNX6-205ENST00000555648 DEF6Q9H4E7 631 aa15.49■□□□□ 0.07
SNX6-205ENST00000555648 WDR26Q9H7D7 661 aa15.49■□□□□ 0.07
SNX6-205ENST00000555648 THSD1Q9NS62 852 aa15.49■□□□□ 0.07
SNX6-205ENST00000555648 ETNK2Q9NVF9 386 aa15.49■□□□□ 0.07
SNX6-205ENST00000555648 CTTNBP2NLQ9P2B4 639 aa15.49■□□□□ 0.07
SNX6-205ENST00000555648 RCOR3Q9P2K3 495 aaPredicted RBP15.49■□□□□ 0.07
SNX6-205ENST00000555648 PCDHGC4Q9Y5F7 938 aa15.49■□□□□ 0.07
SNX6-205ENST00000555648 DOCK9Q9BZ29 2069 aa15.48■□□□□ 0.07
SNX6-205ENST00000555648 TTC24A2A3L6 582 aaPredicted RBP15.48■□□□□ 0.07
SNX6-205ENST00000555648 GOLGA6CA6NDK9 693 aa15.48■□□□□ 0.07
SNX6-205ENST00000555648 GOLGA6BA6NDN3 693 aa15.48■□□□□ 0.07
SNX6-205ENST00000555648 TRAFD1O14545 582 aaPredicted RBP15.48■□□□□ 0.07
SNX6-205ENST00000555648 CELA2BP08218 269 aaPredicted RBP15.48■□□□□ 0.07
SNX6-205ENST00000555648 GOLGA6DP0CG33 693 aa15.48■□□□□ 0.07
SNX6-205ENST00000555648 TCF4P15884 667 aa15.48■□□□□ 0.07
SNX6-205ENST00000555648 ITPKBP27987 946 aa15.48■□□□□ 0.07
SNX6-205ENST00000555648 PBX1P40424 430 aa15.48■□□□□ 0.07
SNX6-205ENST00000555648 KIAA1024LP59773 190 aa15.48■□□□□ 0.07
SNX6-205ENST00000555648 RALGDSQ12967 914 aa15.48■□□□□ 0.07
SNX6-205ENST00000555648 ARHGEF7Q14155 803 aa15.48■□□□□ 0.07
SNX6-205ENST00000555648 C3orf38Q5JPI3 329 aa15.48■□□□□ 0.07
SNX6-205ENST00000555648 RALGPS1Q5JS13 557 aa15.48■□□□□ 0.07
SNX6-205ENST00000555648 PERM1Q5SV97 790 aa15.48■□□□□ 0.07
SNX6-205ENST00000555648 ARMC12Q5T9G4 340 aa15.48■□□□□ 0.07
SNX6-205ENST00000555648 FOXR1Q6PIV2 292 aa15.48■□□□□ 0.07
SNX6-205ENST00000555648 USP45Q70EL2 814 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms