RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 GALNT2Q10471 571 aa9.72□□□□□ -0.85
ACTN1-215ENST00000555616 FOXC1Q12948 553 aa9.72□□□□□ -0.85
ACTN1-215ENST00000555616 SNX1Q13596 522 aa9.72□□□□□ -0.85
ACTN1-215ENST00000555616 DHX34Q14147 1143 aaKnown RBP9.72□□□□□ -0.85
ACTN1-215ENST00000555616 SUZ12Q15022 739 aaKnown RBP9.72□□□□□ -0.85
ACTN1-215ENST00000555616 SHBQ15464 509 aa9.72□□□□□ -0.85
ACTN1-215ENST00000555616 TRIP6Q15654 476 aaKnown RBP9.72□□□□□ -0.85
ACTN1-215ENST00000555616 INAVAQ3KP66 663 aa9.72□□□□□ -0.85
ACTN1-215ENST00000555616 SEL1L3Q68CR1 1132 aa9.72□□□□□ -0.85
ACTN1-215ENST00000555616 C8orf74Q6P047 294 aa9.72□□□□□ -0.85
ACTN1-215ENST00000555616 FBXL19Q6PCT2 694 aa9.72□□□□□ -0.85
ACTN1-215ENST00000555616 DARS2Q6PI48 645 aaKnown RBP9.72□□□□□ -0.85
ACTN1-215ENST00000555616 CCDC137Q6PK04 289 aaKnown RBP9.72□□□□□ -0.85
ACTN1-215ENST00000555616 NPNTQ6UXI9 565 aa9.72□□□□□ -0.85
ACTN1-215ENST00000555616 GDPD4Q6W3E5 623 aa9.72□□□□□ -0.85
ACTN1-215ENST00000555616 GSTA5Q7RTV2 222 aa9.72□□□□□ -0.85
ACTN1-215ENST00000555616 MAATS1Q7Z4T9 603 aa9.72□□□□□ -0.85
ACTN1-215ENST00000555616 SPATS2Q86XZ4 545 aaKnown RBP9.72□□□□□ -0.85
ACTN1-215ENST00000555616 MMGT1Q8N4V1 131 aa9.72□□□□□ -0.85
ACTN1-215ENST00000555616 OXR1Q8N573 874 aa9.72□□□□□ -0.85
ACTN1-215ENST00000555616 ATPAF2Q8N5M1 289 aa9.72□□□□□ -0.85
ACTN1-215ENST00000555616 CCNYQ8ND76 341 aa9.72□□□□□ -0.85
ACTN1-215ENST00000555616 SLC35B2Q8TB61 432 aa9.72□□□□□ -0.85
ACTN1-215ENST00000555616 TFB1MQ8WVM0 346 aaKnown RBP9.72□□□□□ -0.85
ACTN1-215ENST00000555616 CELF6Q96J87 481 aaKnown RBP9.72□□□□□ -0.85
ACTN1-215ENST00000555616 OLFM3Q96PB7 478 aa9.72□□□□□ -0.85
ACTN1-215ENST00000555616 QKIQ96PU8 341 aaKnown RBP eCLIP9.72□□□□□ -0.85
ACTN1-215ENST00000555616 KRT12Q99456 494 aa9.72□□□□□ -0.85
ACTN1-215ENST00000555616 FAM118BQ9BPY3 351 aa9.72□□□□□ -0.85
ACTN1-215ENST00000555616 SLC39A8Q9C0K1 460 aa9.72□□□□□ -0.85
ACTN1-215ENST00000555616 DDX47Q9H0S4 455 aaKnown RBP9.72□□□□□ -0.85
ACTN1-215ENST00000555616 DKK3Q9UBP4 350 aa9.72□□□□□ -0.85
ACTN1-215ENST00000555616 DNPEPQ9ULA0 475 aa9.72□□□□□ -0.85
ACTN1-215ENST00000555616 ZFR2Q9UPR6 939 aaKnown RBP9.72□□□□□ -0.85
ACTN1-215ENST00000555616 BTBD3Q9Y2F9 522 aa9.72□□□□□ -0.85
ACTN1-215ENST00000555616 FRYQ5TBA9 3013 aa9.71□□□□□ -0.85
ACTN1-215ENST00000555616 IGF2RP11717 2491 aa9.71□□□□□ -0.85
ACTN1-215ENST00000555616 TSPAN11A1L157 253 aa9.71□□□□□ -0.86
ACTN1-215ENST00000555616 J3KR12 359 aa9.71□□□□□ -0.86
ACTN1-215ENST00000555616 SLC31A1O15431 190 aa9.71□□□□□ -0.86
ACTN1-215ENST00000555616 MTSS1O43312 755 aa9.71□□□□□ -0.86
ACTN1-215ENST00000555616 TSPAN6O43657 245 aa9.71□□□□□ -0.86
ACTN1-215ENST00000555616 MAGEC1O60732 1142 aa9.71□□□□□ -0.86
ACTN1-215ENST00000555616 DKK1O94907 266 aa9.71□□□□□ -0.86
ACTN1-215ENST00000555616 PCDH8O95206 1070 aa9.71□□□□□ -0.86
ACTN1-215ENST00000555616 TRIM16O95361 564 aa9.71□□□□□ -0.86
ACTN1-215ENST00000555616 MAP3K6O95382 1288 aa9.71□□□□□ -0.86
ACTN1-215ENST00000555616 ECEL1O95672 775 aa9.71□□□□□ -0.86
ACTN1-215ENST00000555616 FTH1P19P0C7X4 201 aa9.71□□□□□ -0.86
ACTN1-215ENST00000555616 HNRNPA2B1P22626 353 aaKnown RBP9.71□□□□□ -0.86
ACTN1-215ENST00000555616 AKT2P31751 481 aa9.71□□□□□ -0.86
ACTN1-215ENST00000555616 STIP1P31948 543 aaKnown RBP9.71□□□□□ -0.86
ACTN1-215ENST00000555616 GARSP41250 739 aaKnown RBP9.71□□□□□ -0.86
ACTN1-215ENST00000555616 RXRGP48443 463 aa9.71□□□□□ -0.86
ACTN1-215ENST00000555616 ARRB1P49407 418 aaPredicted RBP9.71□□□□□ -0.86
ACTN1-215ENST00000555616 RAD51Q06609 339 aa9.71□□□□□ -0.86
ACTN1-215ENST00000555616 SLC10A2Q12908 348 aaPredicted RBP9.71□□□□□ -0.86
ACTN1-215ENST00000555616 PPP1R7Q15435 360 aa9.71□□□□□ -0.86
ACTN1-215ENST00000555616 CYTH1Q15438 398 aa9.71□□□□□ -0.86
ACTN1-215ENST00000555616 GLE1Q53GS7 698 aaKnown RBP9.71□□□□□ -0.86
ACTN1-215ENST00000555616 TIGD7Q6NT04 549 aaPredicted RBP9.71□□□□□ -0.86
ACTN1-215ENST00000555616 GCNT7Q6ZNI0 430 aa9.71□□□□□ -0.86
ACTN1-215ENST00000555616 SYDE1Q6ZW31 735 aaPredicted RBP9.71□□□□□ -0.86
ACTN1-215ENST00000555616 ABI3BPQ7Z7G0 1075 aa9.71□□□□□ -0.86
ACTN1-215ENST00000555616 ZC3H18Q86VM9 953 aaKnown RBP9.71□□□□□ -0.86
ACTN1-215ENST00000555616 CCDC89Q8N998 374 aa9.71□□□□□ -0.86
ACTN1-215ENST00000555616 ATL2Q8NHH9 583 aa9.71□□□□□ -0.86
ACTN1-215ENST00000555616 SAP25Q8TEE9 199 aa9.71□□□□□ -0.86
ACTN1-215ENST00000555616 SETD7Q8WTS6 366 aaKnown RBP9.71□□□□□ -0.86
ACTN1-215ENST00000555616 ASB12Q8WXK4 309 aa9.71□□□□□ -0.86
ACTN1-215ENST00000555616 HDAC11Q96DB2 347 aa9.71□□□□□ -0.86
ACTN1-215ENST00000555616 EXOC2Q96KP1 924 aa9.71□□□□□ -0.86
ACTN1-215ENST00000555616 KLHL32Q96NJ5 620 aa9.71□□□□□ -0.86
ACTN1-215ENST00000555616 CDC6Q99741 560 aa9.71□□□□□ -0.86
ACTN1-215ENST00000555616 C1QTNF2Q9BXJ5 285 aa9.71□□□□□ -0.86
ACTN1-215ENST00000555616 CPEB1Q9BZB8 566 aaKnown RBP9.71□□□□□ -0.86
ACTN1-215ENST00000555616 GPR27Q9NS67 375 aa9.71□□□□□ -0.86
ACTN1-215ENST00000555616 PCYOX1Q9UHG3 505 aa9.71□□□□□ -0.86
ACTN1-215ENST00000555616 ITM2BQ9Y287 266 aa9.71□□□□□ -0.86
ACTN1-215ENST00000555616 DRG1Q9Y295 367 aaKnown RBP9.71□□□□□ -0.86
ACTN1-215ENST00000555616 CA5BQ9Y2D0 317 aa9.71□□□□□ -0.86
ACTN1-215ENST00000555616 AKAP13Q12802 2813 aa9.7□□□□□ -0.86
ACTN1-215ENST00000555616 A6NNZ2 444 aa9.7□□□□□ -0.86
ACTN1-215ENST00000555616 KCNN4O15554 427 aa9.7□□□□□ -0.86
ACTN1-215ENST00000555616 TOP3BO95985 862 aaKnown RBP9.7□□□□□ -0.86
ACTN1-215ENST00000555616 ACTN2P35609 894 aa9.7□□□□□ -0.86
ACTN1-215ENST00000555616 CSNK1DP48730 415 aa9.7□□□□□ -0.86
ACTN1-215ENST00000555616 SUOXP51687 545 aa9.7□□□□□ -0.86
ACTN1-215ENST00000555616 IL9RQ01113 521 aa9.7□□□□□ -0.86
ACTN1-215ENST00000555616 IL10RBQ08334 325 aa9.7□□□□□ -0.86
ACTN1-215ENST00000555616 PPIDQ08752 370 aaKnown RBP9.7□□□□□ -0.86
ACTN1-215ENST00000555616 AP1B1Q10567 949 aa9.7□□□□□ -0.86
ACTN1-215ENST00000555616 FGL2Q14314 439 aa9.7□□□□□ -0.86
ACTN1-215ENST00000555616 RFTN1Q14699 578 aaPredicted RBP9.7□□□□□ -0.86
ACTN1-215ENST00000555616 STAT4Q14765 748 aa9.7□□□□□ -0.86
ACTN1-215ENST00000555616 GRM3Q14832 879 aa9.7□□□□□ -0.86
ACTN1-215ENST00000555616 PRKD1Q15139 912 aaPredicted RBP9.7□□□□□ -0.86
ACTN1-215ENST00000555616 OASLQ15646 514 aaKnown RBP9.7□□□□□ -0.86
ACTN1-215ENST00000555616 TEX35Q5T0J7 233 aa9.7□□□□□ -0.86
ACTN1-215ENST00000555616 TMCO4Q5TGY1 634 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms