RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 KLF10Q13118 480 aa24.38■■□□□ 1.49
TMEM260-207ENST00000555497 BTG3Q14201 252 aaPredicted RBP24.38■■□□□ 1.49
TMEM260-207ENST00000555497 FAM83EQ2M2I3 478 aa24.38■■□□□ 1.49
TMEM260-207ENST00000555497 TRIM60Q495X7 471 aa24.38■■□□□ 1.49
TMEM260-207ENST00000555497 ZNF549Q6P9A3 640 aa24.38■■□□□ 1.49
TMEM260-207ENST00000555497 TRIM67Q6ZTA4 783 aa24.38■■□□□ 1.49
TMEM260-207ENST00000555497 BRSK1Q8TDC3 778 aa24.38■■□□□ 1.49
TMEM260-207ENST00000555497 MYRFLQ96LU7 910 aa24.38■■□□□ 1.49
TMEM260-207ENST00000555497 SMIM14Q96QK8 99 aa24.38■■□□□ 1.49
TMEM260-207ENST00000555497 TRPM5Q9NZQ8 1165 aa24.38■■□□□ 1.49
TMEM260-207ENST00000555497 SEPT3Q9UH03 358 aa24.38■■□□□ 1.49
TMEM260-207ENST00000555497 YIPF1Q9Y548 306 aa24.38■■□□□ 1.49
TMEM260-207ENST00000555497 SPO11Q9Y5K1 396 aa24.38■■□□□ 1.49
TMEM260-207ENST00000555497 TMEM233B4DJY2 109 aa24.37■■□□□ 1.49
TMEM260-207ENST00000555497 LMNAP02545 664 aaKnown RBP24.37■■□□□ 1.49
TMEM260-207ENST00000555497 ATP5F1P24539 256 aaPredicted RBP24.37■■□□□ 1.49
TMEM260-207ENST00000555497 PFKPQ01813 784 aa24.37■■□□□ 1.49
TMEM260-207ENST00000555497 RCN1Q15293 331 aa24.37■■□□□ 1.49
TMEM260-207ENST00000555497 LSM12Q3MHD2 195 aaKnown RBP24.37■■□□□ 1.49
TMEM260-207ENST00000555497 C16orf59Q7L2K0 433 aa24.37■■□□□ 1.49
TMEM260-207ENST00000555497 KDM1BQ8NB78 822 aa24.37■■□□□ 1.49
TMEM260-207ENST00000555497 GABPB2Q8TAK5 448 aaPredicted RBP24.37■■□□□ 1.49
TMEM260-207ENST00000555497 ZNF570Q96NI8 536 aa24.37■■□□□ 1.49
TMEM260-207ENST00000555497 PANX3Q96QZ0 392 aa24.37■■□□□ 1.49
TMEM260-207ENST00000555497 KLF16Q9BXK1 252 aaPredicted RBP24.37■■□□□ 1.49
TMEM260-207ENST00000555497 RNF208Q9H0X6 261 aa24.37■■□□□ 1.49
TMEM260-207ENST00000555497 CYP4F12Q9HCS2 524 aa24.37■■□□□ 1.49
TMEM260-207ENST00000555497 CLDN11O75508 207 aa24.37■■□□□ 1.49
TMEM260-207ENST00000555497 PSMG1O95456 288 aa24.37■■□□□ 1.49
TMEM260-207ENST00000555497 NDST3O95803 873 aa24.37■■□□□ 1.49
TMEM260-207ENST00000555497 PRSS56P0CW18 603 aa24.37■■□□□ 1.49
TMEM260-207ENST00000555497 MNX1P50219 401 aaPredicted RBP24.37■■□□□ 1.49
TMEM260-207ENST00000555497 DNAJB13P59910 316 aa24.37■■□□□ 1.49
TMEM260-207ENST00000555497 TIAL1Q01085 375 aaKnown RBP eCLIP24.37■■□□□ 1.49
TMEM260-207ENST00000555497 NSUN2Q08J23 767 aaKnown RBP eCLIP24.37■■□□□ 1.49
TMEM260-207ENST00000555497 CYTH1Q15438 398 aa24.37■■□□□ 1.49
TMEM260-207ENST00000555497 METTL21CQ5VZV1 264 aa24.37■■□□□ 1.49
TMEM260-207ENST00000555497 CINPQ9BW66 212 aaPredicted RBP24.37■■□□□ 1.49
TMEM260-207ENST00000555497 SCAMP3O14828 347 aaKnown RBP24.36■■□□□ 1.49
TMEM260-207ENST00000555497 SOD2P04179 222 aa24.36■■□□□ 1.49
TMEM260-207ENST00000555497 KCNC1P48547 511 aa24.36■■□□□ 1.49
TMEM260-207ENST00000555497 PTDSS1P48651 473 aaKnown RBP24.36■■□□□ 1.49
TMEM260-207ENST00000555497 SCNN1BP51168 640 aa24.36■■□□□ 1.49
TMEM260-207ENST00000555497 AGAP9Q5VTM2 703 aa24.36■■□□□ 1.49
TMEM260-207ENST00000555497 FRMD7Q6ZUT3 714 aa24.36■■□□□ 1.49
TMEM260-207ENST00000555497 RPS27LQ71UM5 84 aaKnown RBP24.36■■□□□ 1.49
TMEM260-207ENST00000555497 PDCD6IPQ8WUM4 868 aaKnown RBP24.36■■□□□ 1.49
TMEM260-207ENST00000555497 TSPAN17Q96FV3 270 aa24.36■■□□□ 1.49
TMEM260-207ENST00000555497 CD3EAPO15446 510 aaKnown RBP24.35■■□□□ 1.49
TMEM260-207ENST00000555497 NPHS1O60500 1241 aa24.35■■□□□ 1.49
TMEM260-207ENST00000555497 RPP40O75818 363 aaKnown RBP24.35■■□□□ 1.49
TMEM260-207ENST00000555497 RHOCP08134 193 aa24.35■■□□□ 1.49
TMEM260-207ENST00000555497 CCL5P13501 91 aa24.35■■□□□ 1.49
TMEM260-207ENST00000555497 HNRNPLP14866 589 aaKnown RBP eCLIP24.35■■□□□ 1.49
TMEM260-207ENST00000555497 CR2P20023 1033 aa24.35■■□□□ 1.49
TMEM260-207ENST00000555497 IKBKEQ14164 716 aa24.35■■□□□ 1.49
TMEM260-207ENST00000555497 ADGRF1Q5T601 910 aa24.35■■□□□ 1.49
TMEM260-207ENST00000555497 GPR158Q5T848 1215 aa24.35■■□□□ 1.49
TMEM260-207ENST00000555497 G3BP2Q9UN86 482 aaKnown RBP24.35■■□□□ 1.49
TMEM260-207ENST00000555497 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP24.35■■□□□ 1.49
TMEM260-207ENST00000555497 ILVBLA1L0T0 632 aa24.35■■□□□ 1.49
TMEM260-207ENST00000555497 A8MT66 165 aa24.35■■□□□ 1.49
TMEM260-207ENST00000555497 GLP2RO95838 553 aa24.35■■□□□ 1.49
TMEM260-207ENST00000555497 PRLP01236 227 aa24.35■■□□□ 1.49
TMEM260-207ENST00000555497 COX4I1P13073 169 aa24.35■■□□□ 1.49
TMEM260-207ENST00000555497 ERFP50548 548 aa24.35■■□□□ 1.49
TMEM260-207ENST00000555497 KPNA2P52292 529 aaKnown RBP24.35■■□□□ 1.49
TMEM260-207ENST00000555497 ZNF177Q13360 481 aaPredicted RBP24.35■■□□□ 1.49
TMEM260-207ENST00000555497 FSCBQ5H9T9 825 aa24.35■■□□□ 1.49
TMEM260-207ENST00000555497 SPOUT1Q5T280 376 aaKnown RBP24.35■■□□□ 1.49
TMEM260-207ENST00000555497 FAM117BQ6P1L5 589 aa24.35■■□□□ 1.49
TMEM260-207ENST00000555497 RIPOR1Q6ZS17 1223 aa24.35■■□□□ 1.49
TMEM260-207ENST00000555497 NET1Q7Z628 596 aaPredicted RBP24.35■■□□□ 1.49
TMEM260-207ENST00000555497 CMTM5Q96DZ9 223 aa24.35■■□□□ 1.49
TMEM260-207ENST00000555497 RETREG1Q9H6L5 497 aa24.35■■□□□ 1.49
TMEM260-207ENST00000555497 SMPD4Q9NXE4 827 aa24.35■■□□□ 1.49
TMEM260-207ENST00000555497 CBX4O00257 560 aa24.34■■□□□ 1.49
TMEM260-207ENST00000555497 SLC4A1P02730 911 aa24.34■■□□□ 1.49
TMEM260-207ENST00000555497 HK2P52789 917 aa24.34■■□□□ 1.49
TMEM260-207ENST00000555497 PLK1P53350 603 aa24.34■■□□□ 1.49
TMEM260-207ENST00000555497 DSG1Q02413 1049 aa24.34■■□□□ 1.49
TMEM260-207ENST00000555497 PDCD2Q16342 344 aaPredicted RBP24.34■■□□□ 1.49
TMEM260-207ENST00000555497 TMEM198Q66K66 360 aa24.34■■□□□ 1.49
TMEM260-207ENST00000555497 CXorf57Q6NSI4 855 aaKnown RBP24.34■■□□□ 1.49
TMEM260-207ENST00000555497 TMEM150AQ86TG1 271 aa24.34■■□□□ 1.49
TMEM260-207ENST00000555497 LMNTD2Q8IXW0 634 aa24.34■■□□□ 1.49
TMEM260-207ENST00000555497 BBS5Q8N3I7 341 aa24.34■■□□□ 1.49
TMEM260-207ENST00000555497 GPR150Q8NGU9 434 aa24.34■■□□□ 1.49
TMEM260-207ENST00000555497 DTX3LQ8TDB6 740 aa24.34■■□□□ 1.49
TMEM260-207ENST00000555497 AUTS2Q8WXX7 1259 aa24.34■■□□□ 1.49
TMEM260-207ENST00000555497 LENG8Q96PV6 779 aaPredicted RBP24.34■■□□□ 1.49
TMEM260-207ENST00000555497 CYP2S1Q96SQ9 504 aa24.34■■□□□ 1.49
TMEM260-207ENST00000555497 TNFRSF12AQ9NP84 129 aa24.34■■□□□ 1.49
TMEM260-207ENST00000555497 PCDH10Q9P2E7 1040 aa24.34■■□□□ 1.49
TMEM260-207ENST00000555497 ANKRD36A6QL64 1941 aa24.34■■□□□ 1.49
TMEM260-207ENST00000555497 INSIG1O15503 277 aa24.34■■□□□ 1.49
TMEM260-207ENST00000555497 TBX10O75333 385 aa24.34■■□□□ 1.49
TMEM260-207ENST00000555497 PDHA1P08559 390 aa24.34■■□□□ 1.49
TMEM260-207ENST00000555497 ALDH1A3P47895 512 aa24.34■■□□□ 1.49
TMEM260-207ENST00000555497 ASPHQ12797 758 aa24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms