RNA–Protein interactions for RNA: ENST00000555353.5

FOXN3-209, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 1,595 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-209ENST00000555353 NSMCE3Q96MG7 304 aa20.66■□□□□ 0.9
FOXN3-209ENST00000555353 GTPBP2Q9BX10 602 aaKnown RBP20.66■□□□□ 0.9
FOXN3-209ENST00000555353 PCDH12Q9NPG4 1184 aa20.66■□□□□ 0.9
FOXN3-209ENST00000555353 ATP8A1Q9Y2Q0 1164 aa20.66■□□□□ 0.9
FOXN3-209ENST00000555353 PRAMEF26H0Y7S4 382 aa20.65■□□□□ 0.9
FOXN3-209ENST00000555353 SPINT1O43278 529 aa20.65■□□□□ 0.9
FOXN3-209ENST00000555353 MTSS1O43312 755 aa20.65■□□□□ 0.9
FOXN3-209ENST00000555353 HTRA2O43464 458 aaPredicted RBP20.65■□□□□ 0.9
FOXN3-209ENST00000555353 LIASO43766 372 aa20.65■□□□□ 0.9
FOXN3-209ENST00000555353 RBP3P10745 1247 aa20.65■□□□□ 0.9
FOXN3-209ENST00000555353 FNTAP49354 379 aa20.65■□□□□ 0.9
FOXN3-209ENST00000555353 SGCGQ13326 291 aa20.65■□□□□ 0.9
FOXN3-209ENST00000555353 SLC35B2Q8TB61 432 aa20.65■□□□□ 0.9
FOXN3-209ENST00000555353 NETO1Q8TDF5 533 aa20.65■□□□□ 0.9
FOXN3-209ENST00000555353 AGAP3Q96P47 875 aa20.65■□□□□ 0.9
FOXN3-209ENST00000555353 SLC17A9Q9BYT1 436 aa20.65■□□□□ 0.9
FOXN3-209ENST00000555353 CEP41Q9BYV8 373 aa20.65■□□□□ 0.9
FOXN3-209ENST00000555353 ZDHHC5Q9C0B5 715 aa20.65■□□□□ 0.9
FOXN3-209ENST00000555353 TMEM9BQ9NQ34 198 aa20.65■□□□□ 0.9
FOXN3-209ENST00000555353 CDV3Q9UKY7 258 aaKnown RBP20.65■□□□□ 0.9
FOXN3-209ENST00000555353 PCDHB9Q9Y5E1 797 aa20.65■□□□□ 0.9
FOXN3-209ENST00000555353 A0A1B0GVT2 93 aa20.64■□□□□ 0.9
FOXN3-209ENST00000555353 IGLON5A6NGN9 336 aa20.64■□□□□ 0.9
FOXN3-209ENST00000555353 ITIH2P19823 946 aa20.64■□□□□ 0.9
FOXN3-209ENST00000555353 HNRNPA2B1P22626 353 aaKnown RBP20.64■□□□□ 0.9
FOXN3-209ENST00000555353 CA4P22748 312 aa20.64■□□□□ 0.9
FOXN3-209ENST00000555353 NFKBIAP25963 317 aa20.64■□□□□ 0.9
FOXN3-209ENST00000555353 CD38P28907 300 aa20.64■□□□□ 0.9
FOXN3-209ENST00000555353 AKT2P31751 481 aa20.64■□□□□ 0.9
FOXN3-209ENST00000555353 C21orf59P57076 290 aa20.64■□□□□ 0.9
FOXN3-209ENST00000555353 FAM193AP78312 1265 aa20.64■□□□□ 0.9
FOXN3-209ENST00000555353 C2orf54Q08AI8 447 aa20.64■□□□□ 0.9
FOXN3-209ENST00000555353 TP53BP1Q12888 1972 aaPredicted RBP20.64■□□□□ 0.9
FOXN3-209ENST00000555353 TRAF2Q12933 501 aa20.64■□□□□ 0.9
FOXN3-209ENST00000555353 GRIK2Q13002 908 aa20.64■□□□□ 0.9
FOXN3-209ENST00000555353 SNX1Q13596 522 aa20.64■□□□□ 0.9
FOXN3-209ENST00000555353 STAT4Q14765 748 aa20.64■□□□□ 0.9
FOXN3-209ENST00000555353 ARMC12Q5T9G4 340 aa20.64■□□□□ 0.9
FOXN3-209ENST00000555353 DARS2Q6PI48 645 aaKnown RBP20.64■□□□□ 0.9
FOXN3-209ENST00000555353 GRK7Q8WTQ7 553 aa20.64■□□□□ 0.9
FOXN3-209ENST00000555353 MYOCQ99972 504 aa20.64■□□□□ 0.9
FOXN3-209ENST00000555353 FAM118BQ9BPY3 351 aa20.64■□□□□ 0.9
FOXN3-209ENST00000555353 WRAP53Q9BUR4 548 aaKnown RBP20.64■□□□□ 0.9
FOXN3-209ENST00000555353 DNPEPQ9ULA0 475 aa20.64■□□□□ 0.9
FOXN3-209ENST00000555353 ZNF148Q9UQR1 794 aa20.64■□□□□ 0.9
FOXN3-209ENST00000555353 RAI2Q9Y5P3 530 aa20.64■□□□□ 0.9
FOXN3-209ENST00000555353 CFAP69A5D8W1 941 aa20.63■□□□□ 0.89
FOXN3-209ENST00000555353 RIOK3O14730 519 aaKnown RBP20.63■□□□□ 0.89
FOXN3-209ENST00000555353 CPP00450 1065 aa20.63■□□□□ 0.89
FOXN3-209ENST00000555353 TEX44Q53QW1 395 aa20.63■□□□□ 0.89
FOXN3-209ENST00000555353 STPG1Q5TH74 334 aa20.63■□□□□ 0.89
FOXN3-209ENST00000555353 CCDC137Q6PK04 289 aaKnown RBP20.63■□□□□ 0.89
FOXN3-209ENST00000555353 LAYNQ6UX15 382 aa20.63■□□□□ 0.89
FOXN3-209ENST00000555353 KLHL7Q8IXQ5 586 aa20.63■□□□□ 0.89
FOXN3-209ENST00000555353 CNTD1Q8N815 330 aa20.63■□□□□ 0.89
FOXN3-209ENST00000555353 ARRDC2Q8TBH0 407 aa20.63■□□□□ 0.89
FOXN3-209ENST00000555353 SPOCK2Q92563 424 aa20.63■□□□□ 0.89
FOXN3-209ENST00000555353 QKIQ96PU8 341 aaKnown RBP eCLIP20.63■□□□□ 0.898e-7■■■■□ 22.5
FOXN3-209ENST00000555353 DRG1Q9Y295 367 aaKnown RBP20.63■□□□□ 0.89
FOXN3-209ENST00000555353 ANKRD6Q9Y2G4 727 aa20.63■□□□□ 0.89
FOXN3-209ENST00000555353 LRRK1Q38SD2 2015 aa20.63■□□□□ 0.89
FOXN3-209ENST00000555353 WNT9AO14904 365 aa20.63■□□□□ 0.89
FOXN3-209ENST00000555353 VILLO15195 856 aa20.63■□□□□ 0.89
FOXN3-209ENST00000555353 MMP20O60882 483 aa20.63■□□□□ 0.89
FOXN3-209ENST00000555353 TM7SF2O76062 418 aa20.63■□□□□ 0.89
FOXN3-209ENST00000555353 PGLSO95336 258 aa20.63■□□□□ 0.89
FOXN3-209ENST00000555353 SLU7O95391 586 aaKnown RBP20.63■□□□□ 0.89
FOXN3-209ENST00000555353 PAK4O96013 591 aaPredicted RBP20.63■□□□□ 0.89
FOXN3-209ENST00000555353 PRKCGP05129 697 aa20.63■□□□□ 0.89
FOXN3-209ENST00000555353 SDHBP21912 280 aa20.63■□□□□ 0.89
FOXN3-209ENST00000555353 COILP38432 576 aaPredicted RBP20.63■□□□□ 0.89
FOXN3-209ENST00000555353 NIPAL4Q0D2K0 466 aa20.63■□□□□ 0.89
FOXN3-209ENST00000555353 TMEM52BQ4KMG9 183 aa20.63■□□□□ 0.89
FOXN3-209ENST00000555353 IL27RAQ6UWB1 636 aa20.63■□□□□ 0.89
FOXN3-209ENST00000555353 ATL2Q8NHH9 583 aa20.63■□□□□ 0.89
FOXN3-209ENST00000555353 C1QTNF2Q9BXJ5 285 aa20.63■□□□□ 0.89
FOXN3-209ENST00000555353 DDX47Q9H0S4 455 aaKnown RBP20.63■□□□□ 0.89
FOXN3-209ENST00000555353 FZD3Q9NPG1 666 aa20.63■□□□□ 0.89
FOXN3-209ENST00000555353 PHTF1Q9UMS5 762 aa20.63■□□□□ 0.89
FOXN3-209ENST00000555353 ITGAVP06756 1048 aa20.62■□□□□ 0.89
FOXN3-209ENST00000555353 PTPN3P26045 913 aa20.62■□□□□ 0.89
FOXN3-209ENST00000555353 STIP1P31948 543 aaKnown RBP20.62■□□□□ 0.89
FOXN3-209ENST00000555353 MMP12P39900 470 aa20.62■□□□□ 0.89
FOXN3-209ENST00000555353 CD86P42081 329 aa20.62■□□□□ 0.89
FOXN3-209ENST00000555353 LIMK1P53667 647 aa20.62■□□□□ 0.89
FOXN3-209ENST00000555353 RSPO4Q2I0M5 234 aaPredicted RBP20.62■□□□□ 0.89
FOXN3-209ENST00000555353 CCDC70Q6NSX1 233 aa20.62■□□□□ 0.89
FOXN3-209ENST00000555353 GSTA5Q7RTV2 222 aa20.62■□□□□ 0.89
FOXN3-209ENST00000555353 NDUFAF2Q8N183 169 aa20.62■□□□□ 0.89
FOXN3-209ENST00000555353 MINDY1Q8N5J2 469 aa20.62■□□□□ 0.89
FOXN3-209ENST00000555353 MFSD2AQ8NA29 543 aa20.62■□□□□ 0.89
FOXN3-209ENST00000555353 TMEM145Q8NBT3 493 aa20.62■□□□□ 0.89
FOXN3-209ENST00000555353 HTR3CQ8WXA8 447 aa20.62■□□□□ 0.89
FOXN3-209ENST00000555353 KRT12Q99456 494 aa20.62■□□□□ 0.89
FOXN3-209ENST00000555353 VAT1Q99536 393 aa20.62■□□□□ 0.89
FOXN3-209ENST00000555353 C1QTNF7Q9BXJ2 289 aa20.62■□□□□ 0.89
FOXN3-209ENST00000555353 TMEM131Q92545 1883 aa20.62■□□□□ 0.89
FOXN3-209ENST00000555353 C4orf47A7E2U8 309 aa20.61■□□□□ 0.89
FOXN3-209ENST00000555353 CDX4O14627 284 aaPredicted RBP20.61■□□□□ 0.89
FOXN3-209ENST00000555353 STK10O94804 968 aaKnown RBP20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms