RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 TBC1D3HP0C7X1 549 aa12.73□□□□□ -0.37
SYNE2-219ENST00000555323 CYP2A6P11509 494 aaPredicted RBP12.73□□□□□ -0.37
SYNE2-219ENST00000555323 TPSB2P20231 275 aa12.73□□□□□ -0.37
SYNE2-219ENST00000555323 BCKDHBP21953 392 aa12.73□□□□□ -0.37
SYNE2-219ENST00000555323 MMP12P39900 470 aa12.73□□□□□ -0.37
SYNE2-219ENST00000555323 EPHB1P54762 984 aa12.73□□□□□ -0.37
SYNE2-219ENST00000555323 RPS21P63220 83 aaKnown RBP12.73□□□□□ -0.37
SYNE2-219ENST00000555323 RALGDSQ12967 914 aa12.73□□□□□ -0.37
SYNE2-219ENST00000555323 KCNJ11Q14654 390 aa12.73□□□□□ -0.37
SYNE2-219ENST00000555323 AGERQ15109 404 aa12.73□□□□□ -0.37
SYNE2-219ENST00000555323 TPSAB1Q15661 275 aa12.73□□□□□ -0.37
SYNE2-219ENST00000555323 TMEM259Q4ZIN3 620 aa12.73□□□□□ -0.37
SYNE2-219ENST00000555323 SIRPB2Q5JXA9 342 aa12.73□□□□□ -0.37
SYNE2-219ENST00000555323 TBC1D3GQ6DHY5 549 aa12.73□□□□□ -0.37
SYNE2-219ENST00000555323 TBC1D3CQ6IPX1 549 aa12.73□□□□□ -0.37
SYNE2-219ENST00000555323 KIAA1161Q6NSJ0 714 aa12.73□□□□□ -0.37
SYNE2-219ENST00000555323 LIPIQ6XZB0 460 aa12.73□□□□□ -0.37
SYNE2-219ENST00000555323 KDELC2Q7Z4H8 507 aa12.73□□□□□ -0.37
SYNE2-219ENST00000555323 PCGF5Q86SE9 256 aa12.73□□□□□ -0.37
SYNE2-219ENST00000555323 HORMAD1Q86X24 394 aa12.73□□□□□ -0.37
SYNE2-219ENST00000555323 TBC1D3Q8IZP1 549 aaPredicted RBP12.73□□□□□ -0.37
SYNE2-219ENST00000555323 LPCAT1Q8NF37 534 aa12.73□□□□□ -0.37
SYNE2-219ENST00000555323 CPT1BQ92523 772 aa12.73□□□□□ -0.37
SYNE2-219ENST00000555323 RMDN1Q96DB5 314 aa12.73□□□□□ -0.37
SYNE2-219ENST00000555323 TBL1YQ9BQ87 522 aa12.73□□□□□ -0.37
SYNE2-219ENST00000555323 GPR174Q9BXC1 333 aa12.73□□□□□ -0.37
SYNE2-219ENST00000555323 TRABDQ9H4I3 376 aa12.73□□□□□ -0.37
SYNE2-219ENST00000555323 B4GALT6Q9UBX8 382 aa12.73□□□□□ -0.37
SYNE2-219ENST00000555323 ZFR2Q9UPR6 939 aaKnown RBP12.73□□□□□ -0.37
SYNE2-219ENST00000555323 CAPN8A6NHC0 703 aa12.72□□□□□ -0.37
SYNE2-219ENST00000555323 NPIPB15A6NHN6 443 aaPredicted RBP12.72□□□□□ -0.37
SYNE2-219ENST00000555323 E7EVH7 732 aa12.72□□□□□ -0.37
SYNE2-219ENST00000555323 AP3B1O00203 1094 aa12.72□□□□□ -0.37
SYNE2-219ENST00000555323 MAP3K13O43283 966 aa12.72□□□□□ -0.37
SYNE2-219ENST00000555323 RAD51CO43502 376 aa12.72□□□□□ -0.37
SYNE2-219ENST00000555323 NDUFS2O75306 463 aa12.72□□□□□ -0.37
SYNE2-219ENST00000555323 HEXIM1O94992 359 aaKnown RBP12.72□□□□□ -0.37
SYNE2-219ENST00000555323 PCDH8O95206 1070 aa12.72□□□□□ -0.37
SYNE2-219ENST00000555323 PRKCGP05129 697 aa12.72□□□□□ -0.37
SYNE2-219ENST00000555323 ALPIP09923 528 aa12.72□□□□□ -0.37
SYNE2-219ENST00000555323 ZNF30P17039 623 aa12.72□□□□□ -0.37
SYNE2-219ENST00000555323 CTPS1P17812 591 aa12.72□□□□□ -0.37
SYNE2-219ENST00000555323 VIPR1P32241 457 aa12.72□□□□□ -0.37
SYNE2-219ENST00000555323 NUDT1P36639 197 aa12.72□□□□□ -0.37
SYNE2-219ENST00000555323 ADCY8P40145 1251 aa12.72□□□□□ -0.37
SYNE2-219ENST00000555323 CHRNA4P43681 627 aa12.72□□□□□ -0.37
SYNE2-219ENST00000555323 TNNT3P45378 269 aaPredicted RBP12.72□□□□□ -0.37
SYNE2-219ENST00000555323 PTPN5P54829 565 aa12.72□□□□□ -0.37
SYNE2-219ENST00000555323 DRG2P55039 364 aaKnown RBP12.72□□□□□ -0.37
SYNE2-219ENST00000555323 FAM193AP78312 1265 aa12.72□□□□□ -0.37
SYNE2-219ENST00000555323 BASP1P80723 227 aaKnown RBP12.72□□□□□ -0.37
SYNE2-219ENST00000555323 PTSQ03393 145 aa12.72□□□□□ -0.37
SYNE2-219ENST00000555323 SRSF5Q13243 272 aaKnown RBP12.72□□□□□ -0.37
SYNE2-219ENST00000555323 GALNT3Q14435 633 aa12.72□□□□□ -0.37
SYNE2-219ENST00000555323 SPARCL1Q14515 664 aa12.72□□□□□ -0.37
SYNE2-219ENST00000555323 KCTD19Q17RG1 926 aaPredicted RBP12.72□□□□□ -0.37
SYNE2-219ENST00000555323 PLK5Q496M5 336 aa12.72□□□□□ -0.37
SYNE2-219ENST00000555323 LRRC73Q5JTD7 316 aa12.72□□□□□ -0.37
SYNE2-219ENST00000555323 DNTTIP2Q5QJE6 756 aaKnown RBP12.72□□□□□ -0.37
SYNE2-219ENST00000555323 PMS2CLQ68D20 193 aa12.72□□□□□ -0.37
SYNE2-219ENST00000555323 KIAA0895LQ68EN5 471 aa12.72□□□□□ -0.37
SYNE2-219ENST00000555323 ZC3H14Q6PJT7 736 aaKnown RBP12.72□□□□□ -0.37
SYNE2-219ENST00000555323 CRTC1Q6UUV9 634 aa12.72□□□□□ -0.37
SYNE2-219ENST00000555323 PAF1Q8N7H5 531 aa12.72□□□□□ -0.37
SYNE2-219ENST00000555323 NAT8LQ8N9F0 302 aa12.72□□□□□ -0.37
SYNE2-219ENST00000555323 MCUQ8NE86 351 aa12.72□□□□□ -0.37
SYNE2-219ENST00000555323 DNASE2BQ8WZ79 361 aa12.72□□□□□ -0.37
SYNE2-219ENST00000555323 FOXJ1Q92949 421 aa12.72□□□□□ -0.37
SYNE2-219ENST00000555323 BIRC7Q96CA5 298 aa12.72□□□□□ -0.37
SYNE2-219ENST00000555323 C19orf43Q9BQ61 176 aa12.72□□□□□ -0.37
SYNE2-219ENST00000555323 ERP44Q9BS26 406 aa12.72□□□□□ -0.37
SYNE2-219ENST00000555323 FICDQ9BVA6 458 aa12.72□□□□□ -0.37
SYNE2-219ENST00000555323 C1QTNF2Q9BXJ5 285 aa12.72□□□□□ -0.37
SYNE2-219ENST00000555323 C6orf106Q9H6K1 298 aaPredicted RBP12.72□□□□□ -0.37
SYNE2-219ENST00000555323 CASS4Q9NQ75 786 aa12.72□□□□□ -0.37
SYNE2-219ENST00000555323 HACD3Q9P035 362 aa12.72□□□□□ -0.37
SYNE2-219ENST00000555323 GGT7Q9UJ14 662 aa12.72□□□□□ -0.37
SYNE2-219ENST00000555323 ITM2BQ9Y287 266 aa12.72□□□□□ -0.37
SYNE2-219ENST00000555323 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.72□□□□□ -0.37
SYNE2-219ENST00000555323 PLXND1Q9Y4D7 1925 aa12.72□□□□□ -0.37
SYNE2-219ENST00000555323 EML5Q05BV3 1969 aa12.71□□□□□ -0.37
SYNE2-219ENST00000555323 ANKRD36A6QL64 1941 aa12.71□□□□□ -0.37
SYNE2-219ENST00000555323 A0A1W2PQU0 124 aa12.71□□□□□ -0.37
SYNE2-219ENST00000555323 TCRBV7S3A2A0A539 114 aa12.71□□□□□ -0.37
SYNE2-219ENST00000555323 FAM47DPA6NHR8 397 aa12.71□□□□□ -0.37
SYNE2-219ENST00000555323 SMAPO00193 183 aa12.71□□□□□ -0.37
SYNE2-219ENST00000555323 NEMP1O14524 444 aa12.71□□□□□ -0.37
SYNE2-219ENST00000555323 DNALI1O14645 258 aaPredicted RBP12.71□□□□□ -0.37
SYNE2-219ENST00000555323 TP73O15350 636 aa12.71□□□□□ -0.37
SYNE2-219ENST00000555323 RNGTTO60942 597 aaKnown RBP12.71□□□□□ -0.37
SYNE2-219ENST00000555323 USP12O75317 370 aa12.71□□□□□ -0.37
SYNE2-219ENST00000555323 RHOBTB1O94844 696 aa12.71□□□□□ -0.37
SYNE2-219ENST00000555323 IGHV4-34P06331 123 aa12.71□□□□□ -0.37
SYNE2-219ENST00000555323 LHCGRP22888 699 aa12.71□□□□□ -0.37
SYNE2-219ENST00000555323 GRIA1P42261 906 aa12.71□□□□□ -0.37
SYNE2-219ENST00000555323 VPS41P49754 854 aa12.71□□□□□ -0.37
SYNE2-219ENST00000555323 LIG3P49916 1009 aa12.71□□□□□ -0.37
SYNE2-219ENST00000555323 RPL6Q02878 288 aaKnown RBP12.71□□□□□ -0.37
SYNE2-219ENST00000555323 CDH17Q12864 832 aa12.71□□□□□ -0.37
SYNE2-219ENST00000555323 CBLBQ13191 982 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms