RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 TTYH2Q9BSA4 534 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.32□□□□□ -1.88
SYNE2-212ENST00000554584 SLC40A1Q9NP59 571 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 VTA1Q9NP79 307 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 ZNF224Q9NZL3 707 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 ANKRD63C9JTQ0 380 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 G3V3Y1 287 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 ZNF862O60290 1169 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 PPP1R37O75864 691 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 NOMO3P69849 1222 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 MMRN1Q13201 1228 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 NOMO1Q15155 1222 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 VTCN1Q7Z7D3 282 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 VSIG10LQ86VR7 867 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 NPAS4Q8IUM7 802 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 GUF1Q8N442 669 aaKnown RBP3.32□□□□□ -1.88
SYNE2-212ENST00000554584 GRHL3Q8TE85 626 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 MUL1Q969V5 352 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 ZNF775Q96BV0 537 aaPredicted RBP3.32□□□□□ -1.88
SYNE2-212ENST00000554584 DPY30Q9C005 99 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 COA1Q9GZY4 146 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 HMX1Q9NP08 348 aaPredicted RBP3.32□□□□□ -1.88
SYNE2-212ENST00000554584 EHD3Q9NZN3 535 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 GRIN3BO60391 1043 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 FAM200BP0CF97 657 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 NAMPTP43490 491 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 CHRNEQ04844 493 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 NIPAL4Q0D2K0 466 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 HIPK1Q86Z02 1210 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 NEK9Q8TD19 979 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 ARMCX1Q9P291 453 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 CTTNBP2Q8WZ74 1663 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 SYNMO15061 1565 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 FCHO1O14526 889 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 PRH1P02810 166 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 APRTP07741 180 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 SLC11A2P49281 568 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 RAD23AP54725 363 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 FGL1Q08830 312 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 FAM160B2Q86V87 743 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 AMIGO1Q86WK6 493 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 FAM45AQ8TCE6 357 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 OSBPL9Q96SU4 736 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 SLC6A16Q9GZN6 736 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 ELOVL6Q9H5J4 265 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 ARL2BPQ9Y2Y0 163 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 NCANO14594 1321 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 A0A1W2PPL8 197 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 SOX15O60248 233 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 FKTNO75072 461 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 TULP3O75386 442 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 SNX4O95219 450 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 CYP11B2P19099 503 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 LHCGRP22888 699 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 MGAT5Q09328 741 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 MRPL1Q9BYD6 325 aaKnown RBP3.32□□□□□ -1.88
SYNE2-212ENST00000554584 VRTNQ9H8Y1 702 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 MRPL47Q9HD33 250 aaKnown RBP3.32□□□□□ -1.88
SYNE2-212ENST00000554584 EXD2Q9NVH0 621 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 SPATA7Q9P0W8 599 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 LEMD3Q9Y2U8 911 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 CARNS1A5YM72 827 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 QSOX1O00391 747 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 SHOXO15266 292 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 CST8O60676 142 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 CETPP11597 493 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 GRIK2Q13002 908 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 MAN2A1Q16706 1144 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 SETMARQ53H47 684 aaPredicted RBP3.32□□□□□ -1.88
SYNE2-212ENST00000554584 FNBP1LQ5T0N5 605 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 GK5Q6ZS86 529 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 PNPLA1Q8N8W4 532 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 PJA1Q8NG27 643 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 ATP6V1G3Q96LB4 118 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 RNF157Q96PX1 679 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 CCDC177Q9NQR7 707 aaPredicted RBP3.32□□□□□ -1.88
SYNE2-212ENST00000554584 CENPMQ9NSP4 180 aa3.32□□□□□ -1.88
SYNE2-212ENST00000554584 RGS17Q9UGC6 210 aaPredicted RBP3.32□□□□□ -1.88
SYNE2-212ENST00000554584 BIVM-ERCC5R4GMW8 1640 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 hCG_1807616A0A1W2PRN6 198 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 ASB14A6NK59 587 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 SLC38A8A6NNN8 435 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 AGTP01019 485 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 VARSP26640 1264 aaKnown RBP3.31□□□□□ -1.88
SYNE2-212ENST00000554584 TNFRSF8P28908 595 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 ICAM3P32942 547 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 MSX2P35548 267 aaPredicted RBP3.31□□□□□ -1.88
SYNE2-212ENST00000554584 MAGEA11P43364 429 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 RGS4P49798 205 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 TOB2Q14106 344 aaPredicted RBP3.31□□□□□ -1.88
SYNE2-212ENST00000554584 VGLL4Q14135 290 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 NFATC4Q14934 902 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 FAM26DQ5JW98 314 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 SLC2A7Q6PXP3 512 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 POGLUT1Q8NBL1 392 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 MRPL38Q96DV4 380 aaKnown RBP3.31□□□□□ -1.88
SYNE2-212ENST00000554584 ZNF333Q96JL9 665 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 CYP3A43Q9HB55 503 aa3.31□□□□□ -1.88
SYNE2-212ENST00000554584 MRPL22Q9NWU5 206 aaKnown RBP3.31□□□□□ -1.88
SYNE2-212ENST00000554584 GJD2Q9UKL4 321 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms