RNA–Protein interactions for RNA: ENST00000554390.5

PPP4R3A-202, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 2,953 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-202ENST00000554390 CENPIQ92674 756 aaPredicted RBP17.02■□□□□ 0.32
PPP4R3A-202ENST00000554390 EXT2Q93063 718 aa17.02■□□□□ 0.32
PPP4R3A-202ENST00000554390 UPF3AQ9H1J1 476 aaKnown RBP17.02■□□□□ 0.32
PPP4R3A-202ENST00000554390 LRRC40Q9H9A6 602 aa17.02■□□□□ 0.32
PPP4R3A-202ENST00000554390 ZFYVE28Q9HCC9 887 aa17.02■□□□□ 0.32
PPP4R3A-202ENST00000554390 TLK1Q9UKI8 766 aa17.02■□□□□ 0.32
PPP4R3A-202ENST00000554390 TTC24A2A3L6 582 aaPredicted RBP17.02■□□□□ 0.31
PPP4R3A-202ENST00000554390 IQCA1LA6NCM1 817 aa17.02■□□□□ 0.31
PPP4R3A-202ENST00000554390 CLOCKO15516 846 aa17.02■□□□□ 0.31
PPP4R3A-202ENST00000554390 DLX3O60479 287 aa17.02■□□□□ 0.31
PPP4R3A-202ENST00000554390 KCNH1O95259 989 aa17.02■□□□□ 0.31
PPP4R3A-202ENST00000554390 USP17L7P0C7H9 530 aa17.02■□□□□ 0.31
PPP4R3A-202ENST00000554390 KCNA5P22460 613 aa17.02■□□□□ 0.31
PPP4R3A-202ENST00000554390 CHRNA4P43681 627 aa17.02■□□□□ 0.31
PPP4R3A-202ENST00000554390 BCAT1P54687 386 aa17.02■□□□□ 0.31
PPP4R3A-202ENST00000554390 PAN2Q504Q3 1202 aaKnown RBP17.02■□□□□ 0.31
PPP4R3A-202ENST00000554390 SPANXN3Q5MJ09 141 aa17.02■□□□□ 0.31
PPP4R3A-202ENST00000554390 LDLRAP1Q5SW96 308 aa17.02■□□□□ 0.31
PPP4R3A-202ENST00000554390 PACRGLQ8N7B6 248 aa17.02■□□□□ 0.31
PPP4R3A-202ENST00000554390 IPMKQ8NFU5 416 aa17.02■□□□□ 0.31
PPP4R3A-202ENST00000554390 NANOGQ9H9S0 305 aa17.02■□□□□ 0.31
PPP4R3A-202ENST00000554390 FBRSL1Q9HCM7 1045 aaKnown RBP17.02■□□□□ 0.31
PPP4R3A-202ENST00000554390 ARMC1Q9NVT9 282 aa17.02■□□□□ 0.31
PPP4R3A-202ENST00000554390 GPRC5DQ9NZD1 345 aa17.02■□□□□ 0.31
PPP4R3A-202ENST00000554390 TMEM9Q9P0T7 183 aa17.02■□□□□ 0.31
PPP4R3A-202ENST00000554390 MID2Q9UJV3 735 aa17.02■□□□□ 0.31
PPP4R3A-202ENST00000554390 TCAF1Q9Y4C2 921 aa17.02■□□□□ 0.31
PPP4R3A-202ENST00000554390 CCDC162PA2VCL2 907 aa17.01■□□□□ 0.31
PPP4R3A-202ENST00000554390 H3BRB1 525 aa17.01■□□□□ 0.31
PPP4R3A-202ENST00000554390 SDHDO14521 159 aa17.01■□□□□ 0.31
PPP4R3A-202ENST00000554390 TPD52L2O43399 206 aaKnown RBP17.01■□□□□ 0.31
PPP4R3A-202ENST00000554390 NCAM1P13591 858 aa17.01■□□□□ 0.31
PPP4R3A-202ENST00000554390 YBX1P67809 324 aaKnown RBP17.01■□□□□ 0.31
PPP4R3A-202ENST00000554390 ARHGAP1Q07960 439 aa17.01■□□□□ 0.31
PPP4R3A-202ENST00000554390 OXA1LQ15070 435 aa17.01■□□□□ 0.31
PPP4R3A-202ENST00000554390 AGKQ53H12 422 aa17.01■□□□□ 0.31
PPP4R3A-202ENST00000554390 ZNF789Q5FWF6 425 aa17.01■□□□□ 0.31
PPP4R3A-202ENST00000554390 INTS11Q5TA45 600 aaKnown RBP17.01■□□□□ 0.31
PPP4R3A-202ENST00000554390 ABRAXAS1Q6UWZ7 409 aa17.01■□□□□ 0.31
PPP4R3A-202ENST00000554390 ARMCX2Q7L311 632 aa17.01■□□□□ 0.31
PPP4R3A-202ENST00000554390 KDM1BQ8NB78 822 aa17.01■□□□□ 0.31
PPP4R3A-202ENST00000554390 OR2T34Q8NGX1 318 aa17.01■□□□□ 0.31
PPP4R3A-202ENST00000554390 OR2T3Q8NH03 318 aa17.01■□□□□ 0.31
PPP4R3A-202ENST00000554390 ZNF419Q96HQ0 510 aaPredicted RBP17.01■□□□□ 0.31
PPP4R3A-202ENST00000554390 CCDC138Q96M89 665 aa17.01■□□□□ 0.31
PPP4R3A-202ENST00000554390 OLFM1Q99784 485 aa17.01■□□□□ 0.31
PPP4R3A-202ENST00000554390 CPQQ9Y646 472 aa17.01■□□□□ 0.31
PPP4R3A-202ENST00000554390 SCN4AP35499 1836 aa17.01■□□□□ 0.31
PPP4R3A-202ENST00000554390 ATP6V1B2P21281 511 aa17.01■□□□□ 0.31
PPP4R3A-202ENST00000554390 RPS12P25398 132 aaKnown RBP17.01■□□□□ 0.31
PPP4R3A-202ENST00000554390 TKTL1P51854 596 aa17.01■□□□□ 0.31
PPP4R3A-202ENST00000554390 TPI1P60174 286 aa17.01■□□□□ 0.31
PPP4R3A-202ENST00000554390 GRSF1Q12849 480 aaKnown RBP eCLIP17.01■□□□□ 0.31
PPP4R3A-202ENST00000554390 TTLL4Q14679 1199 aa17.01■□□□□ 0.31
PPP4R3A-202ENST00000554390 FBXO47Q5MNV8 452 aa17.01■□□□□ 0.31
PPP4R3A-202ENST00000554390 TBCELQ5QJ74 424 aa17.01■□□□□ 0.31
PPP4R3A-202ENST00000554390 ESRP1Q6NXG1 681 aaKnown RBP17.01■□□□□ 0.31
PPP4R3A-202ENST00000554390 PSTKQ8IV42 348 aaKnown RBP17.01■□□□□ 0.31
PPP4R3A-202ENST00000554390 CENPLQ8N0S6 344 aaPredicted RBP17.01■□□□□ 0.31
PPP4R3A-202ENST00000554390 ULBP1Q9BZM6 244 aa17.01■□□□□ 0.31
PPP4R3A-202ENST00000554390 LRRC4Q9HBW1 653 aa17.01■□□□□ 0.31
PPP4R3A-202ENST00000554390 SUN2Q9UH99 717 aa17.01■□□□□ 0.31
PPP4R3A-202ENST00000554390 SARDHQ9UL12 918 aa17.01■□□□□ 0.31
PPP4R3A-202ENST00000554390 PTGDR2Q9Y5Y4 395 aa17.01■□□□□ 0.31
PPP4R3A-202ENST00000554390 DFFAO00273 331 aa17.01■□□□□ 0.31
PPP4R3A-202ENST00000554390 CABYRO75952 493 aa17.01■□□□□ 0.31
PPP4R3A-202ENST00000554390 CLPXO76031 633 aa17.01■□□□□ 0.31
PPP4R3A-202ENST00000554390 PGK1P00558 417 aa17.01■□□□□ 0.31
PPP4R3A-202ENST00000554390 SLC25A52Q3SY17 297 aa17.01■□□□□ 0.31
PPP4R3A-202ENST00000554390 ARHGAP17Q68EM7 881 aa17.01■□□□□ 0.31
PPP4R3A-202ENST00000554390 BTLAQ7Z6A9 289 aa17.01■□□□□ 0.31
PPP4R3A-202ENST00000554390 IFNLR1Q8IU57 520 aaPredicted RBP17.01■□□□□ 0.31
PPP4R3A-202ENST00000554390 CADM3Q8N126 398 aa17.01■□□□□ 0.31
PPP4R3A-202ENST00000554390 TMCO5AQ8N6Q1 288 aa17.01■□□□□ 0.31
PPP4R3A-202ENST00000554390 TMEM40Q8WWA1 233 aa17.01■□□□□ 0.31
PPP4R3A-202ENST00000554390 HPS1Q92902 700 aa17.01■□□□□ 0.31
PPP4R3A-202ENST00000554390 DDIT4Q9NX09 232 aa17.01■□□□□ 0.31
PPP4R3A-202ENST00000554390 PMPCBO75439 489 aa17■□□□□ 0.31
PPP4R3A-202ENST00000554390 SLC35E2BP0CK96 405 aa17■□□□□ 0.31
PPP4R3A-202ENST00000554390 POLR2IP36954 125 aaKnown RBP17■□□□□ 0.31
PPP4R3A-202ENST00000554390 FASTKQ14296 549 aaKnown RBP17■□□□□ 0.31
PPP4R3A-202ENST00000554390 KCNJ8Q15842 424 aa17■□□□□ 0.31
PPP4R3A-202ENST00000554390 PCSK7Q16549 785 aa17■□□□□ 0.31
PPP4R3A-202ENST00000554390 SAMD4BQ5PRF9 694 aaKnown RBP17■□□□□ 0.31
PPP4R3A-202ENST00000554390 KIAA0319Q5VV43 1072 aa17■□□□□ 0.31
PPP4R3A-202ENST00000554390 WSCD1Q658N2 575 aa17■□□□□ 0.31
PPP4R3A-202ENST00000554390 CLEC6AQ6EIG7 209 aa17■□□□□ 0.31
PPP4R3A-202ENST00000554390 CNSTQ6PJW8 725 aa17■□□□□ 0.31
PPP4R3A-202ENST00000554390 PELI3Q8N2H9 469 aa17■□□□□ 0.31
PPP4R3A-202ENST00000554390 SH3RF2Q8TEC5 729 aa17■□□□□ 0.31
PPP4R3A-202ENST00000554390 LRCH3Q96II8 777 aa17■□□□□ 0.31
PPP4R3A-202ENST00000554390 ALPK1Q96QP1 1244 aa17■□□□□ 0.31
PPP4R3A-202ENST00000554390 ADAMTS10Q9H324 1103 aa17■□□□□ 0.31
PPP4R3A-202ENST00000554390 TMEM181Q9P2C4 612 aa17■□□□□ 0.31
PPP4R3A-202ENST00000554390 SEPT3Q9UH03 358 aa17■□□□□ 0.31
PPP4R3A-202ENST00000554390 PIN4Q9Y237 131 aaKnown RBP17■□□□□ 0.31
PPP4R3A-202ENST00000554390 CSADQ9Y600 493 aa17■□□□□ 0.31
PPP4R3A-202ENST00000554390 FYNP06241 537 aa17■□□□□ 0.31
PPP4R3A-202ENST00000554390 APOA4P06727 396 aa17■□□□□ 0.31
PPP4R3A-202ENST00000554390 S100A1P23297 94 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms