RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 LEXMQ3ZCV2 418 aa10.93□□□□□ -0.66
PABPN1-203ENST00000553960 NEPROQ6NW34 567 aa10.93□□□□□ -0.66
PABPN1-203ENST00000553960 CASC4Q6P4E1 433 aa10.93□□□□□ -0.66
PABPN1-203ENST00000553960 PARM1Q6UWI2 310 aa10.93□□□□□ -0.66
PABPN1-203ENST00000553960 LINGO4Q6UY18 593 aa10.93□□□□□ -0.66
PABPN1-203ENST00000553960 PACS1Q6VY07 963 aa10.93□□□□□ -0.66
PABPN1-203ENST00000553960 RGS9BPQ6ZS82 235 aa10.93□□□□□ -0.66
PABPN1-203ENST00000553960 TPRG1Q6ZUI0 275 aa10.93□□□□□ -0.66
PABPN1-203ENST00000553960 KCNMB4Q86W47 210 aa10.93□□□□□ -0.66
PABPN1-203ENST00000553960 YAF2Q8IY57 180 aa10.93□□□□□ -0.66
PABPN1-203ENST00000553960 DENND1AQ8TEH3 1009 aa10.93□□□□□ -0.66
PABPN1-203ENST00000553960 PTPRN2Q92932 1015 aa10.93□□□□□ -0.66
PABPN1-203ENST00000553960 ZNF669Q96BR6 464 aaPredicted RBP10.93□□□□□ -0.66
PABPN1-203ENST00000553960 CFAP36Q96G28 342 aa10.93□□□□□ -0.66
PABPN1-203ENST00000553960 GPR22Q99680 433 aa10.93□□□□□ -0.66
PABPN1-203ENST00000553960 RBBP8Q99708 897 aa10.93□□□□□ -0.66
PABPN1-203ENST00000553960 PHF7Q9BWX1 381 aaPredicted RBP10.93□□□□□ -0.66
PABPN1-203ENST00000553960 PLA2G2FQ9BZM2 168 aa10.93□□□□□ -0.66
PABPN1-203ENST00000553960 EBF3Q9H4W6 596 aa10.93□□□□□ -0.66
PABPN1-203ENST00000553960 UBE2ZQ9H832 354 aaPredicted RBP10.93□□□□□ -0.66
PABPN1-203ENST00000553960 SLC2A4RGQ9NR83 387 aa10.93□□□□□ -0.66
PABPN1-203ENST00000553960 RAD18Q9NS91 495 aa10.93□□□□□ -0.66
PABPN1-203ENST00000553960 INTS10Q9NVR2 710 aaKnown RBP10.93□□□□□ -0.66
PABPN1-203ENST00000553960 KCTD5Q9NXV2 234 aa10.93□□□□□ -0.66
PABPN1-203ENST00000553960 IL17CQ9P0M4 197 aa10.93□□□□□ -0.66
PABPN1-203ENST00000553960 HECAQ9UBI9 543 aaPredicted RBP10.93□□□□□ -0.66
PABPN1-203ENST00000553960 SLCO3A1Q9UIG8 710 aa10.93□□□□□ -0.66
PABPN1-203ENST00000553960 NOVA2Q9UNW9 492 aaKnown RBP10.93□□□□□ -0.66
PABPN1-203ENST00000553960 PLA2G4CQ9UP65 541 aa10.93□□□□□ -0.66
PABPN1-203ENST00000553960 FCF1Q9Y324 198 aaKnown RBP10.93□□□□□ -0.66
PABPN1-203ENST00000553960 WASF2Q9Y6W5 498 aa10.93□□□□□ -0.66
PABPN1-203ENST00000553960 SCN8AQ9UQD0 1980 aa10.93□□□□□ -0.66
PABPN1-203ENST00000553960 CDH23Q9H251 3354 aa10.93□□□□□ -0.66
PABPN1-203ENST00000553960 TRBV5-4A0A0C4DH59 114 aa10.92□□□□□ -0.66
PABPN1-203ENST00000553960 CXorf49A8MYA2 514 aaPredicted RBP10.92□□□□□ -0.66
PABPN1-203ENST00000553960 PRRT4C9JH25 899 aa10.92□□□□□ -0.66
PABPN1-203ENST00000553960 H0Y858 1186 aa10.92□□□□□ -0.66
PABPN1-203ENST00000553960 PSMD11O00231 422 aa10.92□□□□□ -0.66
PABPN1-203ENST00000553960 RFPL1O75677 317 aa10.92□□□□□ -0.66
PABPN1-203ENST00000553960 PRNPP04156 253 aa10.92□□□□□ -0.66
PABPN1-203ENST00000553960 GSTA1P08263 222 aa10.92□□□□□ -0.66
PABPN1-203ENST00000553960 PDHA1P08559 390 aa10.92□□□□□ -0.66
PABPN1-203ENST00000553960 DHRS4L1P0CG22 281 aa10.92□□□□□ -0.66
PABPN1-203ENST00000553960 GBP2P32456 591 aaPredicted RBP10.92□□□□□ -0.66
PABPN1-203ENST00000553960 CTSOP43234 321 aaPredicted RBP10.92□□□□□ -0.66
PABPN1-203ENST00000553960 RECQLP46063 649 aaPredicted RBP10.92□□□□□ -0.66
PABPN1-203ENST00000553960 CCNHP51946 323 aaPredicted RBP10.92□□□□□ -0.66
PABPN1-203ENST00000553960 ST8SIA6P61647 398 aa10.92□□□□□ -0.66
PABPN1-203ENST00000553960 CRADDP78560 199 aa10.92□□□□□ -0.66
PABPN1-203ENST00000553960 GABPB1Q06547 395 aaPredicted RBP10.92□□□□□ -0.66
PABPN1-203ENST00000553960 OLIG2Q13516 323 aa10.92□□□□□ -0.66
PABPN1-203ENST00000553960 POU6F1Q14863 301 aa10.92□□□□□ -0.66
PABPN1-203ENST00000553960 CNGA3Q16281 694 aa10.92□□□□□ -0.66
PABPN1-203ENST00000553960 ESRP1Q6NXG1 681 aaKnown RBP10.92□□□□□ -0.66
PABPN1-203ENST00000553960 CERS6Q6ZMG9 384 aa10.92□□□□□ -0.66
PABPN1-203ENST00000553960 DPY19L3Q6ZPD9 716 aa10.92□□□□□ -0.66
PABPN1-203ENST00000553960 ZC3HC1Q86WB0 502 aaKnown RBP10.92□□□□□ -0.66
PABPN1-203ENST00000553960 C12orf40Q86WS4 652 aa10.92□□□□□ -0.66
PABPN1-203ENST00000553960 CILP2Q8IUL8 1156 aa10.92□□□□□ -0.66
PABPN1-203ENST00000553960 CYP4X1Q8N118 509 aa10.92□□□□□ -0.66
PABPN1-203ENST00000553960 BANPQ8N9N5 519 aa10.92□□□□□ -0.66
PABPN1-203ENST00000553960 CDKN2AIPNLQ96HQ2 116 aa10.92□□□□□ -0.66
PABPN1-203ENST00000553960 ZNF778Q96MU6 729 aa10.92□□□□□ -0.66
PABPN1-203ENST00000553960 PLEKHG4BQ96PX9 1271 aa10.92□□□□□ -0.66
PABPN1-203ENST00000553960 APOL2Q9BQE5 337 aa10.92□□□□□ -0.66
PABPN1-203ENST00000553960 POPDC3Q9HBV1 291 aa10.92□□□□□ -0.66
PABPN1-203ENST00000553960 PPM1HQ9ULR3 514 aa10.92□□□□□ -0.66
PABPN1-203ENST00000553960 CHKBQ9Y259 395 aa10.92□□□□□ -0.66
PABPN1-203ENST00000553960 PCDHGC4Q9Y5F7 938 aa10.92□□□□□ -0.66
PABPN1-203ENST00000553960 ACTL7AQ9Y615 435 aa10.92□□□□□ -0.66
PABPN1-203ENST00000553960 COMMD10Q9Y6G5 202 aa10.92□□□□□ -0.66
PABPN1-203ENST00000553960 TLDC2A0PJX2 215 aa10.91□□□□□ -0.66
PABPN1-203ENST00000553960 GRXCR2A6NFK2 248 aa10.91□□□□□ -0.66
PABPN1-203ENST00000553960 POC1B-GALNT4F8VUJ3 575 aa10.91□□□□□ -0.66
PABPN1-203ENST00000553960 SCAMP3O14828 347 aaKnown RBP10.91□□□□□ -0.66
PABPN1-203ENST00000553960 CSPG5O95196 566 aa10.91□□□□□ -0.66
PABPN1-203ENST00000553960 ZWINTO95229 277 aa10.91□□□□□ -0.66
PABPN1-203ENST00000553960 KAT7O95251 611 aa10.91□□□□□ -0.66
PABPN1-203ENST00000553960 ITGA2BP08514 1039 aa10.91□□□□□ -0.66
PABPN1-203ENST00000553960 TPH1P17752 444 aa10.91□□□□□ -0.66
PABPN1-203ENST00000553960 CRHR1P34998 444 aa10.91□□□□□ -0.66
PABPN1-203ENST00000553960 PFKPQ01813 784 aa10.91□□□□□ -0.66
PABPN1-203ENST00000553960 CAMK2GQ13555 558 aaPredicted RBP10.91□□□□□ -0.66
PABPN1-203ENST00000553960 AGERQ15109 404 aa10.91□□□□□ -0.66
PABPN1-203ENST00000553960 ZKSCAN8Q15776 578 aaPredicted RBP10.91□□□□□ -0.66
PABPN1-203ENST00000553960 GPR33Q49SQ1 333 aa10.91□□□□□ -0.66
PABPN1-203ENST00000553960 HSP90AA5PQ58FG0 334 aa10.91□□□□□ -0.66
PABPN1-203ENST00000553960 ZNF805Q5CZA5 627 aa10.91□□□□□ -0.66
PABPN1-203ENST00000553960 TMEM196Q5HYL7 178 aa10.91□□□□□ -0.66
PABPN1-203ENST00000553960 AARS2Q5JTZ9 985 aaKnown RBP10.91□□□□□ -0.66
PABPN1-203ENST00000553960 HP1BP3Q5SSJ5 553 aaPredicted RBP10.91□□□□□ -0.66
PABPN1-203ENST00000553960 SYCP2LQ5T4T6 812 aa10.91□□□□□ -0.66
PABPN1-203ENST00000553960 RNF187Q5TA31 235 aaPredicted RBP10.91□□□□□ -0.66
PABPN1-203ENST00000553960 TRIM68Q6AZZ1 485 aa10.91□□□□□ -0.66
PABPN1-203ENST00000553960 MRNIPQ6NTE8 343 aa10.91□□□□□ -0.66
PABPN1-203ENST00000553960 AFTPHQ6ULP2 937 aa10.91□□□□□ -0.66
PABPN1-203ENST00000553960 GDPD4Q6W3E5 623 aa10.91□□□□□ -0.66
PABPN1-203ENST00000553960 USP45Q70EL2 814 aa10.91□□□□□ -0.66
PABPN1-203ENST00000553960 DSG4Q86SJ6 1040 aa10.91□□□□□ -0.66
PABPN1-203ENST00000553960 PPM1NQ8N819 430 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms