RNA–Protein interactions for RNA: ENST00000553870.1

CHD8-206, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-206ENST00000553870 PCDHGB2Q9Y5G2 931 aa9.39□□□□□ -0.91
CHD8-206ENST00000553870 CACNA1EQ15878 2313 aa9.39□□□□□ -0.91
CHD8-206ENST00000553870 TRPM6Q9BX84 2022 aa9.38□□□□□ -0.91
CHD8-206ENST00000553870 SHROOM3Q8TF72 1996 aa9.38□□□□□ -0.91
CHD8-206ENST00000553870 A0A1B0GVT2 93 aa9.38□□□□□ -0.91
CHD8-206ENST00000553870 TTC24A2A3L6 582 aaPredicted RBP9.38□□□□□ -0.91
CHD8-206ENST00000553870 A6NNZ2 444 aa9.38□□□□□ -0.91
CHD8-206ENST00000553870 C4orf47A7E2U8 309 aa9.38□□□□□ -0.91
CHD8-206ENST00000553870 ANKRD66B4E2M5 251 aa9.38□□□□□ -0.91
CHD8-206ENST00000553870 TM4SF5O14894 197 aa9.38□□□□□ -0.91
CHD8-206ENST00000553870 LZTS3O60299 673 aaPredicted RBP9.38□□□□□ -0.91
CHD8-206ENST00000553870 GDF9O60383 454 aa9.38□□□□□ -0.91
CHD8-206ENST00000553870 MMP20O60882 483 aa9.38□□□□□ -0.91
CHD8-206ENST00000553870 GJB3O75712 270 aa9.38□□□□□ -0.91
CHD8-206ENST00000553870 MMP2P08253 660 aa9.38□□□□□ -0.91
CHD8-206ENST00000553870 ZNF30P17039 623 aa9.38□□□□□ -0.91
CHD8-206ENST00000553870 STIP1P31948 543 aaKnown RBP9.38□□□□□ -0.91
CHD8-206ENST00000553870 VIPR1P32241 457 aa9.38□□□□□ -0.91
CHD8-206ENST00000553870 CD86P42081 329 aa9.38□□□□□ -0.91
CHD8-206ENST00000553870 RABIFP47224 123 aa9.38□□□□□ -0.91
CHD8-206ENST00000553870 RXRGP48443 463 aa9.38□□□□□ -0.91
CHD8-206ENST00000553870 LIG3P49916 1009 aa9.38□□□□□ -0.91
CHD8-206ENST00000553870 EPHB1P54762 984 aa9.38□□□□□ -0.91
CHD8-206ENST00000553870 SKOR1P84550 965 aa9.38□□□□□ -0.91
CHD8-206ENST00000553870 BNC1Q01954 994 aa9.38□□□□□ -0.91
CHD8-206ENST00000553870 ZNF211Q13398 564 aaPredicted RBP9.38□□□□□ -0.91
CHD8-206ENST00000553870 FGL2Q14314 439 aa9.38□□□□□ -0.91
CHD8-206ENST00000553870 RSPO4Q2I0M5 234 aaPredicted RBP9.38□□□□□ -0.91
CHD8-206ENST00000553870 ZNF423Q2M1K9 1284 aa9.38□□□□□ -0.91
CHD8-206ENST00000553870 HLA-BQ31612 363 aa9.38□□□□□ -0.91
CHD8-206ENST00000553870 ITPRIPL1Q6GPH6 555 aa9.38□□□□□ -0.91
CHD8-206ENST00000553870 CCDC70Q6NSX1 233 aa9.38□□□□□ -0.91
CHD8-206ENST00000553870 DARS2Q6PI48 645 aaKnown RBP9.38□□□□□ -0.91
CHD8-206ENST00000553870 LIPIQ6XZB0 460 aa9.38□□□□□ -0.91
CHD8-206ENST00000553870 KYAT3Q6YP21 454 aaKnown RBP9.38□□□□□ -0.91
CHD8-206ENST00000553870 DBX2Q6ZNG2 339 aa9.38□□□□□ -0.91
CHD8-206ENST00000553870 USP45Q70EL2 814 aa9.38□□□□□ -0.91
CHD8-206ENST00000553870 PID1Q7Z2X4 250 aa9.38□□□□□ -0.91
CHD8-206ENST00000553870 NLRP8Q86W28 1048 aa9.38□□□□□ -0.91
CHD8-206ENST00000553870 SLC13A5Q86YT5 568 aaPredicted RBP9.38□□□□□ -0.91
CHD8-206ENST00000553870 MINDY1Q8N5J2 469 aa9.38□□□□□ -0.91
CHD8-206ENST00000553870 LRRN4Q8WUT4 740 aa9.38□□□□□ -0.91
CHD8-206ENST00000553870 BMFQ96LC9 184 aa9.38□□□□□ -0.91
CHD8-206ENST00000553870 LYSMD1Q96S90 227 aa9.38□□□□□ -0.91
CHD8-206ENST00000553870 HERPUD2Q9BSE4 406 aa9.38□□□□□ -0.91
CHD8-206ENST00000553870 GTPBP2Q9BX10 602 aaKnown RBP9.38□□□□□ -0.91
CHD8-206ENST00000553870 TDRD1Q9BXT4 1180 aaKnown RBP9.38□□□□□ -0.91
CHD8-206ENST00000553870 KCNF1Q9H3M0 494 aa9.38□□□□□ -0.91
CHD8-206ENST00000553870 GAREM1Q9H706 876 aa9.38□□□□□ -0.91
CHD8-206ENST00000553870 PCDH9Q9HC56 1237 aa9.38□□□□□ -0.91
CHD8-206ENST00000553870 RXFP3Q9NSD7 469 aa9.38□□□□□ -0.91
CHD8-206ENST00000553870 KLHL8Q9P2G9 620 aaPredicted RBP9.38□□□□□ -0.91
CHD8-206ENST00000553870 FAM153AQ9UHL3 310 aa9.38□□□□□ -0.91
CHD8-206ENST00000553870 ZKSCAN5Q9Y2L8 839 aa9.38□□□□□ -0.91
CHD8-206ENST00000553870 SNX11Q9Y5W9 270 aa9.38□□□□□ -0.91
CHD8-206ENST00000553870 SLCO1B1Q9Y6L6 691 aa9.38□□□□□ -0.91
CHD8-206ENST00000553870 ZNF292O60281 2723 aa9.37□□□□□ -0.91
CHD8-206ENST00000553870 A0A0J9YYE9 177 aa9.37□□□□□ -0.91
CHD8-206ENST00000553870 RGSL1A5PLK6 1076 aa9.37□□□□□ -0.91
CHD8-206ENST00000553870 C5orf60A6NFR6 353 aa9.37□□□□□ -0.91
CHD8-206ENST00000553870 KCNK3O14649 394 aa9.37□□□□□ -0.91
CHD8-206ENST00000553870 WNT9AO14904 365 aa9.37□□□□□ -0.91
CHD8-206ENST00000553870 KIF5CO60282 957 aa9.37□□□□□ -0.91
CHD8-206ENST00000553870 PCDHGA12O60330 932 aa9.37□□□□□ -0.91
CHD8-206ENST00000553870 ANXA9O76027 345 aa9.37□□□□□ -0.91
CHD8-206ENST00000553870 HEXIM1O94992 359 aaKnown RBP9.37□□□□□ -0.91
CHD8-206ENST00000553870 PRLP01236 227 aa9.37□□□□□ -0.91
CHD8-206ENST00000553870 TRBC1P01850 177 aa9.37□□□□□ -0.91
CHD8-206ENST00000553870 WNT1P04628 370 aa9.37□□□□□ -0.91
CHD8-206ENST00000553870 PDHA1P08559 390 aa9.37□□□□□ -0.91
CHD8-206ENST00000553870 HOXC4P09017 264 aaPredicted RBP9.37□□□□□ -0.91
CHD8-206ENST00000553870 ELFN1P0C7U0 828 aa9.37□□□□□ -0.91
CHD8-206ENST00000553870 THEGLP0DJG4 465 aa9.37□□□□□ -0.91
CHD8-206ENST00000553870 C6P13671 934 aa9.37□□□□□ -0.91
CHD8-206ENST00000553870 PRLRP16471 622 aa9.37□□□□□ -0.91
CHD8-206ENST00000553870 ITIH2P19823 946 aa9.37□□□□□ -0.91
CHD8-206ENST00000553870 RBL1P28749 1068 aa9.37□□□□□ -0.91
CHD8-206ENST00000553870 CD68P34810 354 aaPredicted RBP9.37□□□□□ -0.91
CHD8-206ENST00000553870 TNNT3P45378 269 aaPredicted RBP9.37□□□□□ -0.91
CHD8-206ENST00000553870 ID4P47928 161 aa9.37□□□□□ -0.91
CHD8-206ENST00000553870 ARRB1P49407 418 aaPredicted RBP9.37□□□□□ -0.91
CHD8-206ENST00000553870 NXPH1P58417 271 aa9.37□□□□□ -0.91
CHD8-206ENST00000553870 CDK18Q07002 472 aa9.37□□□□□ -0.91
CHD8-206ENST00000553870 RALGDSQ12967 914 aa9.37□□□□□ -0.91
CHD8-206ENST00000553870 MPP3Q13368 585 aa9.37□□□□□ -0.91
CHD8-206ENST00000553870 ARHGEF7Q14155 803 aa9.37□□□□□ -0.91
CHD8-206ENST00000553870 PTK2BQ14289 1009 aa9.37□□□□□ -0.91
CHD8-206ENST00000553870 IHHQ14623 411 aa9.37□□□□□ -0.91
CHD8-206ENST00000553870 LRRC14Q15048 493 aa9.37□□□□□ -0.91
CHD8-206ENST00000553870 AADACL2Q6P093 401 aa9.37□□□□□ -0.91
CHD8-206ENST00000553870 Q6ZSR6 202 aa9.37□□□□□ -0.91
CHD8-206ENST00000553870 ZNF567Q8N184 647 aa9.37□□□□□ -0.91
CHD8-206ENST00000553870 SLC35B2Q8TB61 432 aa9.37□□□□□ -0.91
CHD8-206ENST00000553870 KLK6Q92876 244 aa9.37□□□□□ -0.91
CHD8-206ENST00000553870 ELF4Q99607 663 aaPredicted RBP9.37□□□□□ -0.91
CHD8-206ENST00000553870 WRAP53Q9BUR4 548 aaKnown RBP9.37□□□□□ -0.91
CHD8-206ENST00000553870 MLPHQ9BV36 600 aaPredicted RBP9.37□□□□□ -0.91
CHD8-206ENST00000553870 TLR10Q9BXR5 811 aa9.37□□□□□ -0.91
CHD8-206ENST00000553870 USP29Q9HBJ7 922 aa9.37□□□□□ -0.91
CHD8-206ENST00000553870 HOMER3Q9NSC5 361 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms