RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 ZNF441Q8N8Z8 693 aa4.01□□□□□ -1.77
SCFD1-210ENST00000553693 SCCPDHQ8NBX0 429 aa4.01□□□□□ -1.77
SCFD1-210ENST00000553693 STAMQ92783 540 aa4.01□□□□□ -1.77
SCFD1-210ENST00000553693 TMEM19Q96HH6 336 aa4.01□□□□□ -1.77
SCFD1-210ENST00000553693 MMP28Q9H239 520 aa4.01□□□□□ -1.77
SCFD1-210ENST00000553693 C17orf75Q9HAS0 396 aa4.01□□□□□ -1.77
SCFD1-210ENST00000553693 NOX4Q9NPH5 578 aa4.01□□□□□ -1.77
SCFD1-210ENST00000553693 SMARCA2P51531 1590 aa4.01□□□□□ -1.77
SCFD1-210ENST00000553693 KIF26BQ2KJY2 2108 aa4□□□□□ -1.77
SCFD1-210ENST00000553693 XPNPEP2O43895 674 aa4□□□□□ -1.77
SCFD1-210ENST00000553693 NDUFS7O75251 213 aa4□□□□□ -1.77
SCFD1-210ENST00000553693 ITGAXP20702 1163 aa4□□□□□ -1.77
SCFD1-210ENST00000553693 HILS1P60008 231 aa4□□□□□ -1.77
SCFD1-210ENST00000553693 ZNF155Q12901 538 aaPredicted RBP4□□□□□ -1.77
SCFD1-210ENST00000553693 SLC12A1Q13621 1099 aa4□□□□□ -1.77
SCFD1-210ENST00000553693 EFNB3Q15768 340 aa4□□□□□ -1.77
SCFD1-210ENST00000553693 SYT16Q17RD7 645 aa4□□□□□ -1.77
SCFD1-210ENST00000553693 MRGPRG-AS1Q2M3A8 158 aa4□□□□□ -1.77
SCFD1-210ENST00000553693 C10orf62Q5T681 223 aaPredicted RBP4□□□□□ -1.77
SCFD1-210ENST00000553693 SERTAD4-AS1Q5TG53 156 aa4□□□□□ -1.77
SCFD1-210ENST00000553693 KRBA2Q6ZNG9 492 aa4□□□□□ -1.77
SCFD1-210ENST00000553693 TRMT1LQ7Z2T5 733 aaKnown RBP4□□□□□ -1.77
SCFD1-210ENST00000553693 KIAA2013Q8IYS2 634 aa4□□□□□ -1.77
SCFD1-210ENST00000553693 LSM14AQ8ND56 463 aaKnown RBP4□□□□□ -1.77
SCFD1-210ENST00000553693 AGBL3Q8NEM8 1001 aa4□□□□□ -1.77
SCFD1-210ENST00000553693 TNIP2Q8NFZ5 429 aa4□□□□□ -1.77
SCFD1-210ENST00000553693 LNX1Q8TBB1 728 aaPredicted RBP4□□□□□ -1.77
SCFD1-210ENST00000553693 TRIM63Q969Q1 353 aa4□□□□□ -1.77
SCFD1-210ENST00000553693 WBP2Q969T9 261 aa4□□□□□ -1.77
SCFD1-210ENST00000553693 FBXL8Q96CD0 374 aa4□□□□□ -1.77
SCFD1-210ENST00000553693 SIN3AQ96ST3 1273 aa4□□□□□ -1.77
SCFD1-210ENST00000553693 CSF3RQ99062 836 aa4□□□□□ -1.77
SCFD1-210ENST00000553693 EYA3Q99504 573 aa4□□□□□ -1.77
SCFD1-210ENST00000553693 MXRA8Q9BRK3 442 aa4□□□□□ -1.77
SCFD1-210ENST00000553693 BABAM1Q9NWV8 329 aa4□□□□□ -1.77
SCFD1-210ENST00000553693 IL1RAPL1Q9NZN1 696 aa4□□□□□ -1.77
SCFD1-210ENST00000553693 PEMTQ9UBM1 199 aa4□□□□□ -1.77
SCFD1-210ENST00000553693 COMMD10Q9Y6G5 202 aa4□□□□□ -1.77
SCFD1-210ENST00000553693 WDR81Q562E7 1941 aa3.99□□□□□ -1.77
SCFD1-210ENST00000553693 A0A0G2JPF8 293 aa3.99□□□□□ -1.77
SCFD1-210ENST00000553693 HNRNPCL3B7ZW38 293 aa3.99□□□□□ -1.77
SCFD1-210ENST00000553693 HNRNPCL1O60812 293 aaKnown RBP3.99□□□□□ -1.77
SCFD1-210ENST00000553693 TCEA3O75764 348 aa3.99□□□□□ -1.77
SCFD1-210ENST00000553693 CRYAAP02489 173 aa3.99□□□□□ -1.77
SCFD1-210ENST00000553693 HNRNPCL4P0DMR1 293 aa3.99□□□□□ -1.77
SCFD1-210ENST00000553693 CETPP11597 493 aa3.99□□□□□ -1.77
SCFD1-210ENST00000553693 KCNA5P22460 613 aa3.99□□□□□ -1.77
SCFD1-210ENST00000553693 POU1F1P28069 291 aa3.99□□□□□ -1.77
SCFD1-210ENST00000553693 IL15P40933 162 aaPredicted RBP3.99□□□□□ -1.77
SCFD1-210ENST00000553693 ZNF132P52740 706 aa3.99□□□□□ -1.77
SCFD1-210ENST00000553693 CLDN2P57739 230 aa3.99□□□□□ -1.77
SCFD1-210ENST00000553693 RBM39Q14498 530 aaKnown RBP3.99□□□□□ -1.77
SCFD1-210ENST00000553693 CCDC6Q16204 474 aa3.99□□□□□ -1.77
SCFD1-210ENST00000553693 MAP3K21Q5TCX8 1036 aa3.99□□□□□ -1.77
SCFD1-210ENST00000553693 DSELQ8IZU8 1212 aa3.99□□□□□ -1.77
SCFD1-210ENST00000553693 MAGEC3Q8TD91 643 aa3.99□□□□□ -1.77
SCFD1-210ENST00000553693 PPM1EQ8WY54 764 aa3.99□□□□□ -1.77
SCFD1-210ENST00000553693 TBC1D20Q96BZ9 403 aa3.99□□□□□ -1.77
SCFD1-210ENST00000553693 KXD1Q9BQD3 176 aa3.99□□□□□ -1.77
SCFD1-210ENST00000553693 REEP2Q9BRK0 252 aa3.99□□□□□ -1.77
SCFD1-210ENST00000553693 KRTAP4-3Q9BYR4 195 aa3.99□□□□□ -1.77
SCFD1-210ENST00000553693 SNTG1Q9NSN8 517 aa3.99□□□□□ -1.77
SCFD1-210ENST00000553693 KIAA1456Q9P272 454 aa3.99□□□□□ -1.77
SCFD1-210ENST00000553693 NFE2L3Q9Y4A8 694 aa3.99□□□□□ -1.77
SCFD1-210ENST00000553693 CGNL1Q0VF96 1302 aa3.98□□□□□ -1.77
SCFD1-210ENST00000553693 GOLGA6L10A0A0M3HER8 536 aa3.98□□□□□ -1.77
SCFD1-210ENST00000553693 SOCS6O14544 535 aa3.98□□□□□ -1.77
SCFD1-210ENST00000553693 MID1O15344 667 aa3.98□□□□□ -1.77
SCFD1-210ENST00000553693 PLRG1O43660 514 aaKnown RBP3.98□□□□□ -1.77
SCFD1-210ENST00000553693 FGF17O60258 216 aa3.98□□□□□ -1.77
SCFD1-210ENST00000553693 KLK8O60259 260 aa3.98□□□□□ -1.77
SCFD1-210ENST00000553693 GUCY1B2O75343 617 aa3.98□□□□□ -1.77
SCFD1-210ENST00000553693 CGAP01215 116 aa3.98□□□□□ -1.77
SCFD1-210ENST00000553693 ATP1A1P05023 1023 aaKnown RBP3.98□□□□□ -1.77
SCFD1-210ENST00000553693 RAD23BP54727 409 aa3.98□□□□□ -1.77
SCFD1-210ENST00000553693 VEPH1Q14D04 833 aa3.98□□□□□ -1.77
SCFD1-210ENST00000553693 RBBP5Q15291 538 aaKnown RBP3.98□□□□□ -1.77
SCFD1-210ENST00000553693 TAF11Q15544 211 aa3.98□□□□□ -1.77
SCFD1-210ENST00000553693 CTF1Q16619 201 aa3.98□□□□□ -1.77
SCFD1-210ENST00000553693 WDR45BQ5MNZ6 344 aa3.98□□□□□ -1.77
SCFD1-210ENST00000553693 WDR73Q6P4I2 378 aa3.98□□□□□ -1.77
SCFD1-210ENST00000553693 TADA2BQ86TJ2 420 aa3.98□□□□□ -1.77
SCFD1-210ENST00000553693 GPAT4Q86UL3 456 aa3.98□□□□□ -1.77
SCFD1-210ENST00000553693 SUGP1Q8IWZ8 645 aaKnown RBP3.98□□□□□ -1.77
SCFD1-210ENST00000553693 C11orf65Q8NCR3 313 aa3.98□□□□□ -1.77
SCFD1-210ENST00000553693 ZNF570Q96NI8 536 aa3.98□□□□□ -1.77
SCFD1-210ENST00000553693 ISCA1Q9BUE6 129 aa3.98□□□□□ -1.77
SCFD1-210ENST00000553693 NUF2Q9BZD4 464 aa3.98□□□□□ -1.77
SCFD1-210ENST00000553693 ITM2CQ9NQX7 267 aa3.98□□□□□ -1.77
SCFD1-210ENST00000553693 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.98□□□□□ -1.77
SCFD1-210ENST00000553693 HMGXB3Q12766 1538 aa3.98□□□□□ -1.77
SCFD1-210ENST00000553693 KIF21AQ7Z4S6 1674 aa3.97□□□□□ -1.77
SCFD1-210ENST00000553693 PDS5BQ9NTI5 1447 aa3.97□□□□□ -1.77
SCFD1-210ENST00000553693 AKR1B15C9JRZ8 316 aaPredicted RBP3.97□□□□□ -1.77
SCFD1-210ENST00000553693 FAM72CH0Y354 149 aa3.97□□□□□ -1.77
SCFD1-210ENST00000553693 P2RY10O00398 339 aa3.97□□□□□ -1.77
SCFD1-210ENST00000553693 NTN3O00634 580 aaPredicted RBP3.97□□□□□ -1.77
SCFD1-210ENST00000553693 ETFAP13804 333 aa3.97□□□□□ -1.77
SCFD1-210ENST00000553693 GLIPR1P48060 266 aa3.97□□□□□ -1.77
SCFD1-210ENST00000553693 SEC61BP60468 96 aaKnown RBP3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms