RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 CHRNA4P43681 627 aa12.97□□□□□ -0.33
SHMT2-205ENST00000553474 SLC10A7Q0GE19 358 aa12.97□□□□□ -0.33
SHMT2-205ENST00000553474 ART3Q13508 389 aa12.97□□□□□ -0.33
SHMT2-205ENST00000553474 SERINC3Q13530 473 aa12.97□□□□□ -0.33
SHMT2-205ENST00000553474 CSHL1Q14406 222 aa12.97□□□□□ -0.33
SHMT2-205ENST00000553474 POLD3Q15054 466 aaPredicted RBP12.97□□□□□ -0.33
SHMT2-205ENST00000553474 PCSK7Q16549 785 aa12.97□□□□□ -0.33
SHMT2-205ENST00000553474 CLLU1OSQ5K130 101 aa12.97□□□□□ -0.33
SHMT2-205ENST00000553474 VARS2Q5ST30 1063 aaKnown RBP12.97□□□□□ -0.33
SHMT2-205ENST00000553474 HECTD2Q5U5R9 776 aa12.97□□□□□ -0.33
SHMT2-205ENST00000553474 ALG1LQ6GMV1 187 aa12.97□□□□□ -0.33
SHMT2-205ENST00000553474 MRNIPQ6NTE8 343 aa12.97□□□□□ -0.33
SHMT2-205ENST00000553474 CNSTQ6PJW8 725 aa12.97□□□□□ -0.33
SHMT2-205ENST00000553474 SDCCAG8Q86SQ7 713 aaPredicted RBP12.97□□□□□ -0.33
SHMT2-205ENST00000553474 ZNF280BQ86YH2 543 aa12.97□□□□□ -0.33
SHMT2-205ENST00000553474 BBS5Q8N3I7 341 aa12.97□□□□□ -0.33
SHMT2-205ENST00000553474 AGR3Q8TD06 166 aa12.97□□□□□ -0.33
SHMT2-205ENST00000553474 TOP1MTQ969P6 601 aa12.97□□□□□ -0.33
SHMT2-205ENST00000553474 CCDC124Q96CT7 223 aaKnown RBP12.97□□□□□ -0.33
SHMT2-205ENST00000553474 PABPC5Q96DU9 382 aaKnown RBP12.97□□□□□ -0.33
SHMT2-205ENST00000553474 L3HYPDHQ96EM0 354 aa12.97□□□□□ -0.33
SHMT2-205ENST00000553474 TRAPPC9Q96Q05 1148 aa12.97□□□□□ -0.33
SHMT2-205ENST00000553474 TMEM39AQ9NV64 488 aa12.97□□□□□ -0.33
SHMT2-205ENST00000553474 TMEM161AQ9NX61 479 aa12.97□□□□□ -0.33
SHMT2-205ENST00000553474 MARCH2Q9P0N8 246 aa12.97□□□□□ -0.33
SHMT2-205ENST00000553474 DLGAP2Q9P1A6 1054 aa12.97□□□□□ -0.33
SHMT2-205ENST00000553474 A8MT66 165 aa12.97□□□□□ -0.33
SHMT2-205ENST00000553474 SDHDO14521 159 aa12.97□□□□□ -0.33
SHMT2-205ENST00000553474 F7P08709 466 aaPredicted RBP12.97□□□□□ -0.33
SHMT2-205ENST00000553474 OR4Q2P0C623 313 aa12.97□□□□□ -0.33
SHMT2-205ENST00000553474 LINGO3P0C6S8 592 aa12.97□□□□□ -0.33
SHMT2-205ENST00000553474 IMPDH1P20839 514 aa12.97□□□□□ -0.33
SHMT2-205ENST00000553474 OR1G1P47890 313 aa12.97□□□□□ -0.33
SHMT2-205ENST00000553474 ATP4BP51164 291 aa12.97□□□□□ -0.33
SHMT2-205ENST00000553474 ITKQ08881 620 aa12.97□□□□□ -0.33
SHMT2-205ENST00000553474 ELAVL2Q12926 359 aaKnown RBP12.97□□□□□ -0.33
SHMT2-205ENST00000553474 SQLEQ14534 574 aa12.97□□□□□ -0.33
SHMT2-205ENST00000553474 ZNF460Q14592 562 aa12.97□□□□□ -0.33
SHMT2-205ENST00000553474 DDR2Q16832 855 aa12.97□□□□□ -0.33
SHMT2-205ENST00000553474 C5orf22Q49AR2 442 aa12.97□□□□□ -0.33
SHMT2-205ENST00000553474 C1orf53Q5VUE5 145 aa12.97□□□□□ -0.33
SHMT2-205ENST00000553474 NXNQ6DKJ4 435 aa12.97□□□□□ -0.33
SHMT2-205ENST00000553474 OR52E8Q6IFG1 317 aa12.97□□□□□ -0.33
SHMT2-205ENST00000553474 FBXL22Q6P050 247 aa12.97□□□□□ -0.33
SHMT2-205ENST00000553474 C7orf61Q8IZ16 206 aa12.97□□□□□ -0.33
SHMT2-205ENST00000553474 RIN3Q8TB24 985 aa12.97□□□□□ -0.33
SHMT2-205ENST00000553474 ARRDC2Q8TBH0 407 aa12.97□□□□□ -0.33
SHMT2-205ENST00000553474 FBXO32Q969P5 355 aa12.97□□□□□ -0.33
SHMT2-205ENST00000553474 SHCBP1LQ9BZQ2 653 aa12.97□□□□□ -0.33
SHMT2-205ENST00000553474 ATXN3LQ9H3M9 355 aa12.97□□□□□ -0.33
SHMT2-205ENST00000553474 HIPK3Q9H422 1215 aa12.97□□□□□ -0.33
SHMT2-205ENST00000553474 GMIPQ9P107 970 aa12.97□□□□□ -0.33
SHMT2-205ENST00000553474 UXTQ9UBK9 157 aaPredicted RBP12.97□□□□□ -0.33
SHMT2-205ENST00000553474 COPG1Q9Y678 874 aaKnown RBP12.97□□□□□ -0.33
SHMT2-205ENST00000553474 CCDC189A1A4V9 331 aa12.96□□□□□ -0.34
SHMT2-205ENST00000553474 J3KR12 359 aa12.96□□□□□ -0.34
SHMT2-205ENST00000553474 PRAMEF11O60813 436 aa12.96□□□□□ -0.34
SHMT2-205ENST00000553474 CCDC166P0CW27 439 aa12.96□□□□□ -0.34
SHMT2-205ENST00000553474 HAPLN1P10915 354 aaPredicted RBP12.96□□□□□ -0.34
SHMT2-205ENST00000553474 UQCRBP14927 111 aa12.96□□□□□ -0.34
SHMT2-205ENST00000553474 OGNP20774 298 aaKnown RBP12.96□□□□□ -0.34
SHMT2-205ENST00000553474 ME2P23368 584 aa12.96□□□□□ -0.34
SHMT2-205ENST00000553474 SULT2A1Q06520 285 aa12.96□□□□□ -0.34
SHMT2-205ENST00000553474 EFEMP1Q12805 493 aa12.96□□□□□ -0.34
SHMT2-205ENST00000553474 MED21Q13503 144 aa12.96□□□□□ -0.34
SHMT2-205ENST00000553474 BFSP2Q13515 415 aa12.96□□□□□ -0.34
SHMT2-205ENST00000553474 FLOT2Q14254 428 aa12.96□□□□□ -0.34
SHMT2-205ENST00000553474 ZNF423Q2M1K9 1284 aa12.96□□□□□ -0.34
SHMT2-205ENST00000553474 CTXN3Q4LDR2 81 aa12.96□□□□□ -0.34
SHMT2-205ENST00000553474 ALFQ53S48 1182 aa12.96□□□□□ -0.34
SHMT2-205ENST00000553474 SIRPB2Q5JXA9 342 aa12.96□□□□□ -0.34
SHMT2-205ENST00000553474 TCHHL1Q5QJ38 904 aaPredicted RBP12.96□□□□□ -0.34
SHMT2-205ENST00000553474 OGFRL1Q5TC84 451 aaPredicted RBP12.96□□□□□ -0.34
SHMT2-205ENST00000553474 TFAP2DQ7Z6R9 452 aa12.96□□□□□ -0.34
SHMT2-205ENST00000553474 RTN4RL1Q86UN2 441 aaPredicted RBP12.96□□□□□ -0.34
SHMT2-205ENST00000553474 RHEBL1Q8TAI7 183 aa12.96□□□□□ -0.34
SHMT2-205ENST00000553474 GDPD5Q8WTR4 605 aa12.96□□□□□ -0.34
SHMT2-205ENST00000553474 UCMAQ8WVF2 138 aa12.96□□□□□ -0.34
SHMT2-205ENST00000553474 PSMG2Q969U7 264 aa12.96□□□□□ -0.34
SHMT2-205ENST00000553474 IFT43Q96FT9 208 aa12.96□□□□□ -0.34
SHMT2-205ENST00000553474 TOX2Q96NM4 488 aa12.96□□□□□ -0.34
SHMT2-205ENST00000553474 OLFM1Q99784 485 aa12.96□□□□□ -0.34
SHMT2-205ENST00000553474 MRPL1Q9BYD6 325 aaKnown RBP12.96□□□□□ -0.34
SHMT2-205ENST00000553474 WDR41Q9HAD4 459 aa12.96□□□□□ -0.34
SHMT2-205ENST00000553474 EPS15L1Q9UBC2 864 aa12.96□□□□□ -0.34
SHMT2-205ENST00000553474 NUDT5Q9UKK9 219 aa12.96□□□□□ -0.34
SHMT2-205ENST00000553474 ASB3Q9Y575 518 aa12.96□□□□□ -0.34
SHMT2-205ENST00000553474 F8W810 466 aa12.95□□□□□ -0.34
SHMT2-205ENST00000553474 H3BNX3 289 aa12.95□□□□□ -0.34
SHMT2-205ENST00000553474 LDB2O43679 373 aa12.95□□□□□ -0.34
SHMT2-205ENST00000553474 GLP2RO95838 553 aa12.95□□□□□ -0.34
SHMT2-205ENST00000553474 S1PR4O95977 384 aa12.95□□□□□ -0.34
SHMT2-205ENST00000553474 LYNP07948 512 aa12.95□□□□□ -0.34
SHMT2-205ENST00000553474 ATXN1LP0C7T5 689 aaKnown RBP12.95□□□□□ -0.34
SHMT2-205ENST00000553474 RAG1P15918 1043 aa12.95□□□□□ -0.34
SHMT2-205ENST00000553474 CES1P23141 567 aa12.95□□□□□ -0.34
SHMT2-205ENST00000553474 ACADVLP49748 655 aa12.95□□□□□ -0.34
SHMT2-205ENST00000553474 SUOXP51687 545 aa12.95□□□□□ -0.34
SHMT2-205ENST00000553474 GPR17Q13304 367 aa12.95□□□□□ -0.34
SHMT2-205ENST00000553474 PDCD2Q16342 344 aaPredicted RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms