RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 TCRBV7S3A2A0A539 114 aa14.9□□□□□ -0.02
MTHFD1-204ENST00000553405 ERI2A8K979 691 aaKnown RBP14.9□□□□□ -0.02
MTHFD1-204ENST00000553405 METTL12A8MUP2 240 aa14.9□□□□□ -0.02
MTHFD1-204ENST00000553405 BHMG1C9JSJ3 638 aaPredicted RBP14.9□□□□□ -0.02
MTHFD1-204ENST00000553405 TSPAN6O43657 245 aa14.9□□□□□ -0.02
MTHFD1-204ENST00000553405 USP12O75317 370 aa14.9□□□□□ -0.02
MTHFD1-204ENST00000553405 ECEL1O95672 775 aa14.9□□□□□ -0.02
MTHFD1-204ENST00000553405 CTPS1P17812 591 aa14.9□□□□□ -0.02
MTHFD1-204ENST00000553405 CA4P22748 312 aa14.9□□□□□ -0.02
MTHFD1-204ENST00000553405 GRIA1P42261 906 aa14.9□□□□□ -0.02
MTHFD1-204ENST00000553405 PTGER3P43115 390 aa14.9□□□□□ -0.02
MTHFD1-204ENST00000553405 CCR5P51681 352 aa14.9□□□□□ -0.02
MTHFD1-204ENST00000553405 PTPN5P54829 565 aa14.9□□□□□ -0.02
MTHFD1-204ENST00000553405 CCDC15Q0P6D6 951 aa14.9□□□□□ -0.02
MTHFD1-204ENST00000553405 CNGA3Q16281 694 aa14.9□□□□□ -0.02
MTHFD1-204ENST00000553405 SPDYCQ5MJ68 293 aa14.9□□□□□ -0.02
MTHFD1-204ENST00000553405 SEL1L3Q68CR1 1132 aa14.9□□□□□ -0.02
MTHFD1-204ENST00000553405 CRTC1Q6UUV9 634 aa14.9□□□□□ -0.02
MTHFD1-204ENST00000553405 C4orf22Q6V702 233 aa14.9□□□□□ -0.02
MTHFD1-204ENST00000553405 ZNF534Q76KX8 674 aa14.9□□□□□ -0.02
MTHFD1-204ENST00000553405 GSTA5Q7RTV2 222 aa14.9□□□□□ -0.02
MTHFD1-204ENST00000553405 KDELC2Q7Z4H8 507 aa14.9□□□□□ -0.02
MTHFD1-204ENST00000553405 C11orf74Q86VG3 221 aa14.9□□□□□ -0.02
MTHFD1-204ENST00000553405 HORMAD1Q86X24 394 aa14.9□□□□□ -0.02
MTHFD1-204ENST00000553405 JAMLQ86YT9 394 aa14.9□□□□□ -0.02
MTHFD1-204ENST00000553405 SUMF1Q8NBK3 374 aa14.9□□□□□ -0.02
MTHFD1-204ENST00000553405 GRK7Q8WTQ7 553 aa14.9□□□□□ -0.02
MTHFD1-204ENST00000553405 DNASE2BQ8WZ79 361 aa14.9□□□□□ -0.02
MTHFD1-204ENST00000553405 CPT1BQ92523 772 aa14.9□□□□□ -0.02
MTHFD1-204ENST00000553405 FICDQ9BVA6 458 aa14.9□□□□□ -0.02
MTHFD1-204ENST00000553405 C1QTNF2Q9BXJ5 285 aa14.9□□□□□ -0.02
MTHFD1-204ENST00000553405 EIF2B3Q9NR50 452 aaKnown RBP14.9□□□□□ -0.02
MTHFD1-204ENST00000553405 FEZ2Q9UHY8 353 aaPredicted RBP14.9□□□□□ -0.02
MTHFD1-204ENST00000553405 THADAQ6YHU6 1953 aa14.9□□□□□ -0.02
MTHFD1-204ENST00000553405 SCN8AQ9UQD0 1980 aa14.9□□□□□ -0.02
MTHFD1-204ENST00000553405 MYLKQ15746 1914 aa14.9□□□□□ -0.02
MTHFD1-204ENST00000553405 DNAH14Q0VDD8 3507 aa14.89□□□□□ -0.03
MTHFD1-204ENST00000553405 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.89□□□□□ -0.03
MTHFD1-204ENST00000553405 A0A1W2PQU0 124 aa14.89□□□□□ -0.03
MTHFD1-204ENST00000553405 LRRC72A6NJI9 287 aa14.89□□□□□ -0.03
MTHFD1-204ENST00000553405 TTI1O43156 1089 aa14.89□□□□□ -0.03
MTHFD1-204ENST00000553405 RAD51CO43502 376 aa14.89□□□□□ -0.03
MTHFD1-204ENST00000553405 RNGTTO60942 597 aaKnown RBP14.89□□□□□ -0.03
MTHFD1-204ENST00000553405 TMEM63AO94886 807 aa14.89□□□□□ -0.03
MTHFD1-204ENST00000553405 HEXIM1O94992 359 aaKnown RBP14.89□□□□□ -0.03
MTHFD1-204ENST00000553405 HLA-DPA1P20036 260 aa14.89□□□□□ -0.03
MTHFD1-204ENST00000553405 VIPR1P32241 457 aa14.89□□□□□ -0.03
MTHFD1-204ENST00000553405 NBL1P41271 181 aa14.89□□□□□ -0.03
MTHFD1-204ENST00000553405 MRPS25P82663 173 aaKnown RBP14.89□□□□□ -0.03
MTHFD1-204ENST00000553405 DR1Q01658 176 aa14.89□□□□□ -0.03
MTHFD1-204ENST00000553405 RPL6Q02878 288 aaKnown RBP14.89□□□□□ -0.03
MTHFD1-204ENST00000553405 CKAP4Q07065 602 aaKnown RBP14.89□□□□□ -0.03
MTHFD1-204ENST00000553405 ELP6Q0PNE2 266 aa14.89□□□□□ -0.03
MTHFD1-204ENST00000553405 GPS1Q13098 491 aa14.89□□□□□ -0.03
MTHFD1-204ENST00000553405 DHX34Q14147 1143 aaKnown RBP14.89□□□□□ -0.03
MTHFD1-204ENST00000553405 PRPSAP1Q14558 356 aa14.89□□□□□ -0.03
MTHFD1-204ENST00000553405 AGERQ15109 404 aa14.89□□□□□ -0.03
MTHFD1-204ENST00000553405 SYCP2LQ5T4T6 812 aa14.89□□□□□ -0.03
MTHFD1-204ENST00000553405 PEAR1Q5VY43 1037 aaPredicted RBP14.89□□□□□ -0.03
MTHFD1-204ENST00000553405 ANKRD22Q5VYY1 191 aa14.89□□□□□ -0.03
MTHFD1-204ENST00000553405 KIAA0895LQ68EN5 471 aa14.89□□□□□ -0.03
MTHFD1-204ENST00000553405 LIPIQ6XZB0 460 aa14.89□□□□□ -0.03
MTHFD1-204ENST00000553405 TMEFF1Q8IYR6 380 aa14.89□□□□□ -0.03
MTHFD1-204ENST00000553405 NOA1Q8NC60 698 aaKnown RBP14.89□□□□□ -0.03
MTHFD1-204ENST00000553405 BIRC7Q96CA5 298 aa14.89□□□□□ -0.03
MTHFD1-204ENST00000553405 COQ10AQ96MF6 247 aa14.89□□□□□ -0.03
MTHFD1-204ENST00000553405 RUNDC3BQ96NL0 473 aa14.89□□□□□ -0.03
MTHFD1-204ENST00000553405 KLF6Q99612 283 aaPredicted RBP14.89□□□□□ -0.03
MTHFD1-204ENST00000553405 TBL1YQ9BQ87 522 aa14.89□□□□□ -0.03
MTHFD1-204ENST00000553405 APOL2Q9BQE5 337 aa14.89□□□□□ -0.03
MTHFD1-204ENST00000553405 TRIM51Q9BSJ1 452 aa14.89□□□□□ -0.03
MTHFD1-204ENST00000553405 ADGRE3Q9BY15 652 aa14.89□□□□□ -0.03
MTHFD1-204ENST00000553405 LRRC40Q9H9A6 602 aa14.89□□□□□ -0.03
MTHFD1-204ENST00000553405 ZNF292O60281 2723 aa14.89□□□□□ -0.03
MTHFD1-204ENST00000553405 PLXNA2O75051 1894 aa14.89□□□□□ -0.03
MTHFD1-204ENST00000553405 AURKAO14965 403 aa14.88□□□□□ -0.03
MTHFD1-204ENST00000553405 GAS8O95995 478 aa14.88□□□□□ -0.03
MTHFD1-204ENST00000553405 FGF1P05230 155 aa14.88□□□□□ -0.03
MTHFD1-204ENST00000553405 C6P13671 934 aa14.88□□□□□ -0.03
MTHFD1-204ENST00000553405 TPSB2P20231 275 aa14.88□□□□□ -0.03
MTHFD1-204ENST00000553405 VPS41P49754 854 aa14.88□□□□□ -0.03
MTHFD1-204ENST00000553405 LIG3P49916 1009 aa14.88□□□□□ -0.03
MTHFD1-204ENST00000553405 STC1P52823 247 aa14.88□□□□□ -0.03
MTHFD1-204ENST00000553405 PTSQ03393 145 aa14.88□□□□□ -0.03
MTHFD1-204ENST00000553405 TPSAB1Q15661 275 aa14.88□□□□□ -0.03
MTHFD1-204ENST00000553405 CFAP58Q5T655 872 aa14.88□□□□□ -0.03
MTHFD1-204ENST00000553405 RNASEH2BQ5TBB1 312 aaKnown RBP14.88□□□□□ -0.03
MTHFD1-204ENST00000553405 KIAA1161Q6NSJ0 714 aa14.88□□□□□ -0.03
MTHFD1-204ENST00000553405 ERAP2Q6P179 960 aa14.88□□□□□ -0.03
MTHFD1-204ENST00000553405 RFLNAQ6ZTI6 216 aa14.88□□□□□ -0.03
MTHFD1-204ENST00000553405 SYDE1Q6ZW31 735 aaPredicted RBP14.88□□□□□ -0.03
MTHFD1-204ENST00000553405 TTC30BQ8N4P2 665 aa14.88□□□□□ -0.03
MTHFD1-204ENST00000553405 SLC25A41Q8N5S1 370 aa14.88□□□□□ -0.03
MTHFD1-204ENST00000553405 DEFB119Q8N690 84 aa14.88□□□□□ -0.03
MTHFD1-204ENST00000553405 NAT8LQ8N9F0 302 aa14.88□□□□□ -0.03
MTHFD1-204ENST00000553405 ASB12Q8WXK4 309 aa14.88□□□□□ -0.03
MTHFD1-204ENST00000553405 IFT43Q96FT9 208 aa14.88□□□□□ -0.03
MTHFD1-204ENST00000553405 WRAP53Q9BUR4 548 aaKnown RBP14.88□□□□□ -0.03
MTHFD1-204ENST00000553405 MAGEE1Q9HCI5 957 aa14.88□□□□□ -0.03
MTHFD1-204ENST00000553405 CASS4Q9NQ75 786 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms