RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 KIAA1614Q5VZ46 1190 aa10□□□□□ -0.81
ACTN1-208ENST00000553370 PRICKLE2Q7Z3G6 844 aa10□□□□□ -0.81
ACTN1-208ENST00000553370 SPNS2Q8IVW8 549 aa10□□□□□ -0.81
ACTN1-208ENST00000553370 PYROXD2Q8N2H3 581 aa10□□□□□ -0.81
ACTN1-208ENST00000553370 SDR16C5Q8N3Y7 309 aa10□□□□□ -0.81
ACTN1-208ENST00000553370 FBXO39Q8N4B4 442 aa10□□□□□ -0.81
ACTN1-208ENST00000553370 C3orf20Q8ND61 904 aa10□□□□□ -0.81
ACTN1-208ENST00000553370 TSACCQ96A04 125 aaPredicted RBP10□□□□□ -0.81
ACTN1-208ENST00000553370 NTAN1Q96AB6 310 aa10□□□□□ -0.81
ACTN1-208ENST00000553370 CENPTQ96BT3 561 aa10□□□□□ -0.81
ACTN1-208ENST00000553370 TBATAQ96M53 351 aa10□□□□□ -0.81
ACTN1-208ENST00000553370 SLC46A1Q96NT5 459 aa10□□□□□ -0.81
ACTN1-208ENST00000553370 MCEEQ96PE7 176 aa10□□□□□ -0.81
ACTN1-208ENST00000553370 GANQ9H2C0 597 aa10□□□□□ -0.81
ACTN1-208ENST00000553370 ATP13A3Q9H7F0 1226 aa10□□□□□ -0.81
ACTN1-208ENST00000553370 SUDS3Q9H7L9 328 aaPredicted RBP10□□□□□ -0.81
ACTN1-208ENST00000553370 SP110Q9HB58 689 aa10□□□□□ -0.81
ACTN1-208ENST00000553370 CHMP5Q9NZZ3 219 aa10□□□□□ -0.81
ACTN1-208ENST00000553370 DAAM1Q9Y4D1 1078 aa10□□□□□ -0.81
ACTN1-208ENST00000553370 PTPN13Q12923 2485 aa10□□□□□ -0.81
ACTN1-208ENST00000553370 HECTD1Q9ULT8 2610 aa10□□□□□ -0.81
ACTN1-208ENST00000553370 ARHGAP42A6NI28 874 aa9.99□□□□□ -0.81
ACTN1-208ENST00000553370 SOWAHDA6NJG2 315 aa9.99□□□□□ -0.81
ACTN1-208ENST00000553370 D6RAR5 112 aa9.99□□□□□ -0.81
ACTN1-208ENST00000553370 PLD2O14939 933 aa9.99□□□□□ -0.81
ACTN1-208ENST00000553370 CCP110O43303 1012 aa9.99□□□□□ -0.81
ACTN1-208ENST00000553370 CD160O95971 181 aa9.99□□□□□ -0.81
ACTN1-208ENST00000553370 TNFP01375 233 aa9.99□□□□□ -0.81
ACTN1-208ENST00000553370 CELA2BP08218 269 aaPredicted RBP9.99□□□□□ -0.81
ACTN1-208ENST00000553370 ELFN1P0C7U0 828 aa9.99□□□□□ -0.81
ACTN1-208ENST00000553370 CCDC172P0C7W6 258 aa9.99□□□□□ -0.81
ACTN1-208ENST00000553370 TIMP2P16035 220 aa9.99□□□□□ -0.81
ACTN1-208ENST00000553370 KELP23276 732 aa9.99□□□□□ -0.81
ACTN1-208ENST00000553370 RFC1P35251 1148 aaPredicted RBP9.99□□□□□ -0.81
ACTN1-208ENST00000553370 PEX5P50542 639 aa9.99□□□□□ -0.81
ACTN1-208ENST00000553370 HK3P52790 923 aa9.99□□□□□ -0.81
ACTN1-208ENST00000553370 INHBCP55103 352 aa9.99□□□□□ -0.81
ACTN1-208ENST00000553370 YBEYP58557 167 aaPredicted RBP9.99□□□□□ -0.81
ACTN1-208ENST00000553370 SRP54P61011 504 aaKnown RBP9.99□□□□□ -0.81
ACTN1-208ENST00000553370 EIF3IQ13347 325 aaKnown RBP9.99□□□□□ -0.81
ACTN1-208ENST00000553370 SERINC3Q13530 473 aa9.99□□□□□ -0.81
ACTN1-208ENST00000553370 ARHGEF7Q14155 803 aa9.99□□□□□ -0.81
ACTN1-208ENST00000553370 KRT31Q15323 416 aa9.99□□□□□ -0.81
ACTN1-208ENST00000553370 CLEC16AQ2KHT3 1053 aa9.99□□□□□ -0.81
ACTN1-208ENST00000553370 MAP9Q49MG5 647 aa9.99□□□□□ -0.81
ACTN1-208ENST00000553370 INO80DQ53TQ3 878 aaPredicted RBP9.99□□□□□ -0.81
ACTN1-208ENST00000553370 IGF2-ASQ6U949 168 aa9.99□□□□□ -0.81
ACTN1-208ENST00000553370 THSD4Q6ZMP0 1018 aa9.99□□□□□ -0.81
ACTN1-208ENST00000553370 NYAP1Q6ZVC0 841 aa9.99□□□□□ -0.81
ACTN1-208ENST00000553370 RAB11FIP2Q7L804 512 aa9.99□□□□□ -0.81
ACTN1-208ENST00000553370 BNIPLQ7Z465 357 aa9.99□□□□□ -0.81
ACTN1-208ENST00000553370 TAF8Q7Z7C8 310 aa9.99□□□□□ -0.81
ACTN1-208ENST00000553370 BPHLQ86WA6 291 aaPredicted RBP9.99□□□□□ -0.81
ACTN1-208ENST00000553370 Q8N9G6 341 aaPredicted RBP9.99□□□□□ -0.81
ACTN1-208ENST00000553370 TP53I13Q8NBR0 393 aaPredicted RBP9.99□□□□□ -0.81
ACTN1-208ENST00000553370 OR6C4Q8NGE1 309 aa9.99□□□□□ -0.81
ACTN1-208ENST00000553370 WBP1Q96G27 269 aa9.99□□□□□ -0.81
ACTN1-208ENST00000553370 WDR92Q96MX6 357 aa9.99□□□□□ -0.81
ACTN1-208ENST00000553370 TMEM74Q96NL1 305 aa9.99□□□□□ -0.81
ACTN1-208ENST00000553370 CINPQ9BW66 212 aaPredicted RBP9.99□□□□□ -0.81
ACTN1-208ENST00000553370 EDEM3Q9BZQ6 932 aa9.99□□□□□ -0.81
ACTN1-208ENST00000553370 FOXP3Q9BZS1 431 aa9.99□□□□□ -0.81
ACTN1-208ENST00000553370 PCDH12Q9NPG4 1184 aa9.99□□□□□ -0.81
ACTN1-208ENST00000553370 MBNL1Q9NR56 388 aaKnown RBP9.99□□□□□ -0.81
ACTN1-208ENST00000553370 AKAP7Q9P0M2 348 aaPredicted RBP9.99□□□□□ -0.81
ACTN1-208ENST00000553370 SEPT10Q9P0V9 454 aa9.99□□□□□ -0.81
ACTN1-208ENST00000553370 DKK3Q9UBP4 350 aa9.99□□□□□ -0.81
ACTN1-208ENST00000553370 PISDQ9UG56 409 aa9.99□□□□□ -0.81
ACTN1-208ENST00000553370 OR1A2Q9Y585 309 aa9.99□□□□□ -0.81
ACTN1-208ENST00000553370 RP1L1Q8IWN7 2480 aaPredicted RBP9.98□□□□□ -0.81
ACTN1-208ENST00000553370 SDK2Q58EX2 2172 aa9.98□□□□□ -0.81
ACTN1-208ENST00000553370 PMS2P1A4D2B8 440 aa9.98□□□□□ -0.81
ACTN1-208ENST00000553370 GOLGA6CA6NDK9 693 aa9.98□□□□□ -0.81
ACTN1-208ENST00000553370 GOLGA6BA6NDN3 693 aa9.98□□□□□ -0.81
ACTN1-208ENST00000553370 B4DGG1 531 aa9.98□□□□□ -0.81
ACTN1-208ENST00000553370 DFFAO00273 331 aa9.98□□□□□ -0.81
ACTN1-208ENST00000553370 EEF2KO00418 725 aaKnown RBP9.98□□□□□ -0.81
ACTN1-208ENST00000553370 INSIG1O15503 277 aa9.98□□□□□ -0.81
ACTN1-208ENST00000553370 SLC28A2O43868 658 aa9.98□□□□□ -0.81
ACTN1-208ENST00000553370 PALMO75781 387 aa9.98□□□□□ -0.81
ACTN1-208ENST00000553370 GOLGA6DP0CG33 693 aa9.98□□□□□ -0.81
ACTN1-208ENST00000553370 CHRNB2P17787 502 aa9.98□□□□□ -0.81
ACTN1-208ENST00000553370 ITIH2P19823 946 aa9.98□□□□□ -0.81
ACTN1-208ENST00000553370 CDK11BP21127 795 aaKnown RBP9.98□□□□□ -0.81
ACTN1-208ENST00000553370 NFKBIAP25963 317 aa9.98□□□□□ -0.81
ACTN1-208ENST00000553370 SERPINB4P48594 390 aa9.98□□□□□ -0.81
ACTN1-208ENST00000553370 LIG3P49916 1009 aa9.98□□□□□ -0.81
ACTN1-208ENST00000553370 ZNF143P52747 638 aaPredicted RBP9.98□□□□□ -0.81
ACTN1-208ENST00000553370 AIF1P55008 147 aa9.98□□□□□ -0.81
ACTN1-208ENST00000553370 INPP5AQ14642 412 aa9.98□□□□□ -0.81
ACTN1-208ENST00000553370 UGP2Q16851 508 aa9.98□□□□□ -0.81
ACTN1-208ENST00000553370 ALG11Q2TAA5 492 aa9.98□□□□□ -0.81
ACTN1-208ENST00000553370 TMEM52BQ4KMG9 183 aa9.98□□□□□ -0.81
ACTN1-208ENST00000553370 CT47A1Q5JQC4 288 aaPredicted RBP9.98□□□□□ -0.81
ACTN1-208ENST00000553370 PHF19Q5T6S3 580 aa9.98□□□□□ -0.81
ACTN1-208ENST00000553370 BRAT1Q6PJG6 821 aa9.98□□□□□ -0.81
ACTN1-208ENST00000553370 WDR59Q6PJI9 974 aa9.98□□□□□ -0.81
ACTN1-208ENST00000553370 LVRNQ6Q4G3 990 aa9.98□□□□□ -0.81
ACTN1-208ENST00000553370 USP53Q70EK8 1073 aa9.98□□□□□ -0.81
ACTN1-208ENST00000553370 CCNJLQ8IV13 435 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms