RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 KYQ8NBH2 561 aa5.24□□□□□ -1.57
CKAP4-203ENST00000553039 DENND6BQ8NEG7 585 aa5.24□□□□□ -1.57
CKAP4-203ENST00000553039 OR4D9Q8NGE8 314 aa5.24□□□□□ -1.57
CKAP4-203ENST00000553039 GRIN3AQ8TCU5 1115 aa5.24□□□□□ -1.57
CKAP4-203ENST00000553039 WFDC5Q8TCV5 224 aa5.24□□□□□ -1.57
CKAP4-203ENST00000553039 STK35Q8TDR2 534 aa5.24□□□□□ -1.57
CKAP4-203ENST00000553039 THAP4Q8WY91 577 aa5.24□□□□□ -1.57
CKAP4-203ENST00000553039 RAD54LQ92698 747 aa5.24□□□□□ -1.57
CKAP4-203ENST00000553039 PNPLA2Q96AD5 504 aa5.24□□□□□ -1.57
CKAP4-203ENST00000553039 SLC39A13Q96H72 371 aa5.24□□□□□ -1.57
CKAP4-203ENST00000553039 FAM84AQ96KN4 292 aa5.24□□□□□ -1.57
CKAP4-203ENST00000553039 NSUN5Q96P11 429 aaKnown RBP5.24□□□□□ -1.57
CKAP4-203ENST00000553039 IPO9Q96P70 1041 aaKnown RBP5.24□□□□□ -1.57
CKAP4-203ENST00000553039 SPOCK3Q9BQ16 436 aa5.24□□□□□ -1.57
CKAP4-203ENST00000553039 LRRC61Q9BV99 259 aa5.24□□□□□ -1.57
CKAP4-203ENST00000553039 SPRY4Q9C004 299 aa5.24□□□□□ -1.57
CKAP4-203ENST00000553039 XYLT2Q9H1B5 865 aa5.24□□□□□ -1.57
CKAP4-203ENST00000553039 RASSF4Q9H2L5 321 aa5.24□□□□□ -1.57
CKAP4-203ENST00000553039 FBXO8Q9NRD0 319 aa5.24□□□□□ -1.57
CKAP4-203ENST00000553039 AGPAT4Q9NRZ5 378 aa5.24□□□□□ -1.57
CKAP4-203ENST00000553039 FAM49BQ9NUQ9 324 aa5.24□□□□□ -1.57
CKAP4-203ENST00000553039 NDFIP2Q9NV92 336 aa5.24□□□□□ -1.57
CKAP4-203ENST00000553039 RRN3Q9NYV6 651 aa5.24□□□□□ -1.57
CKAP4-203ENST00000553039 SFMBT1Q9UHJ3 866 aa5.24□□□□□ -1.57
CKAP4-203ENST00000553039 SLC12A6Q9UHW9 1150 aa5.24□□□□□ -1.57
CKAP4-203ENST00000553039 CROTQ9UKG9 612 aa5.24□□□□□ -1.57
CKAP4-203ENST00000553039 ZFR2Q9UPR6 939 aaKnown RBP5.24□□□□□ -1.57
CKAP4-203ENST00000553039 OAS3Q9Y6K5 1087 aaKnown RBP5.24□□□□□ -1.57
CKAP4-203ENST00000553039 NIPBLQ6KC79 2804 aaeCLIP5.24□□□□□ -1.57
CKAP4-203ENST00000553039 CRYBG3Q68DQ2 2970 aa5.24□□□□□ -1.57
CKAP4-203ENST00000553039 MYH10P35580 1976 aa5.24□□□□□ -1.57
CKAP4-203ENST00000553039 TCHHQ07283 1943 aa5.23□□□□□ -1.57
CKAP4-203ENST00000553039 APCP25054 2843 aa5.23□□□□□ -1.57
CKAP4-203ENST00000553039 IGHV5-10-1A0A0J9YXX1 117 aa5.23□□□□□ -1.57
CKAP4-203ENST00000553039 CDC14CA4D256 554 aa5.23□□□□□ -1.57
CKAP4-203ENST00000553039 IGLON5A6NGN9 336 aa5.23□□□□□ -1.57
CKAP4-203ENST00000553039 AP1G1O43747 822 aa5.23□□□□□ -1.57
CKAP4-203ENST00000553039 HTR3BO95264 441 aa5.23□□□□□ -1.57
CKAP4-203ENST00000553039 THBS1P07996 1170 aa5.23□□□□□ -1.57
CKAP4-203ENST00000553039 VAV1P15498 845 aa5.23□□□□□ -1.57
CKAP4-203ENST00000553039 GPR3P46089 330 aa5.23□□□□□ -1.57
CKAP4-203ENST00000553039 CCL11P51671 97 aa5.23□□□□□ -1.57
CKAP4-203ENST00000553039 TKTL1P51854 596 aa5.23□□□□□ -1.57
CKAP4-203ENST00000553039 NEK3P51956 506 aa5.23□□□□□ -1.57
CKAP4-203ENST00000553039 ZNF143P52747 638 aaPredicted RBP5.23□□□□□ -1.57
CKAP4-203ENST00000553039 METAP1P53582 386 aa5.23□□□□□ -1.57
CKAP4-203ENST00000553039 ITGA1P56199 1179 aa5.23□□□□□ -1.57
CKAP4-203ENST00000553039 SNRPFP62306 86 aaKnown RBP5.23□□□□□ -1.57
CKAP4-203ENST00000553039 RPS24P62847 133 aaKnown RBP5.23□□□□□ -1.57
CKAP4-203ENST00000553039 KRT83P78385 493 aa5.23□□□□□ -1.57
CKAP4-203ENST00000553039 MC2RQ01718 297 aa5.23□□□□□ -1.57
CKAP4-203ENST00000553039 GUCY1B3Q02153 619 aa5.23□□□□□ -1.57
CKAP4-203ENST00000553039 PCSK7Q16549 785 aa5.23□□□□□ -1.57
CKAP4-203ENST00000553039 SNRNP35Q16560 246 aaKnown RBP5.23□□□□□ -1.57
CKAP4-203ENST00000553039 FSCBQ5H9T9 825 aa5.23□□□□□ -1.57
CKAP4-203ENST00000553039 MS4A13Q5J8X5 152 aa5.23□□□□□ -1.57
CKAP4-203ENST00000553039 CT47A1Q5JQC4 288 aaPredicted RBP5.23□□□□□ -1.57
CKAP4-203ENST00000553039 PAPD7Q5XG87 772 aaKnown RBP5.23□□□□□ -1.57
CKAP4-203ENST00000553039 VHLLQ6RSH7 139 aa5.23□□□□□ -1.57
CKAP4-203ENST00000553039 ADAMTSL4Q6UY14 1074 aa5.23□□□□□ -1.57
CKAP4-203ENST00000553039 MACC1Q6ZN28 852 aa5.23□□□□□ -1.57
CKAP4-203ENST00000553039 UNC5AQ6ZN44 842 aa5.23□□□□□ -1.57
CKAP4-203ENST00000553039 MMS22LQ6ZRQ5 1243 aa5.23□□□□□ -1.57
CKAP4-203ENST00000553039 VN1R5Q7Z5H4 357 aa5.23□□□□□ -1.57
CKAP4-203ENST00000553039 TAF8Q7Z7C8 310 aa5.23□□□□□ -1.57
CKAP4-203ENST00000553039 SFR1Q86XK3 245 aa5.23□□□□□ -1.57
CKAP4-203ENST00000553039 FAM129CQ86XR2 697 aa5.23□□□□□ -1.57
CKAP4-203ENST00000553039 CBWD2Q8IUF1 395 aa5.23□□□□□ -1.57
CKAP4-203ENST00000553039 TTC39CQ8N584 583 aa5.23□□□□□ -1.57
CKAP4-203ENST00000553039 CHDHQ8NE62 594 aaPredicted RBP5.23□□□□□ -1.57
CKAP4-203ENST00000553039 FBXO18Q8NFZ0 1043 aa5.23□□□□□ -1.57
CKAP4-203ENST00000553039 PCDH19Q8TAB3 1148 aa5.23□□□□□ -1.57
CKAP4-203ENST00000553039 KIAA1524Q8TCG1 905 aa5.23□□□□□ -1.57
CKAP4-203ENST00000553039 LARP4BQ92615 738 aaKnown RBP5.23□□□□□ -1.57
CKAP4-203ENST00000553039 HPS1Q92902 700 aa5.23□□□□□ -1.57
CKAP4-203ENST00000553039 RAB7BQ96AH8 199 aa5.23□□□□□ -1.57
CKAP4-203ENST00000553039 CENPTQ96BT3 561 aa5.23□□□□□ -1.57
CKAP4-203ENST00000553039 SNRNP40Q96DI7 357 aaKnown RBP5.23□□□□□ -1.57
CKAP4-203ENST00000553039 ARHGEF26Q96DR7 871 aa5.23□□□□□ -1.57
CKAP4-203ENST00000553039 TWSG1Q9GZX9 223 aa5.23□□□□□ -1.57
CKAP4-203ENST00000553039 ADAM19Q9H013 955 aa5.23□□□□□ -1.57
CKAP4-203ENST00000553039 ZNF700Q9H0M5 742 aa5.23□□□□□ -1.57
CKAP4-203ENST00000553039 IKZF4Q9H2S9 585 aa5.23□□□□□ -1.57
CKAP4-203ENST00000553039 TCEAL2Q9H3H9 227 aaPredicted RBP5.23□□□□□ -1.57
CKAP4-203ENST00000553039 DPEP2Q9H4A9 486 aa5.23□□□□□ -1.57
CKAP4-203ENST00000553039 SMYD3Q9H7B4 428 aa5.23□□□□□ -1.57
CKAP4-203ENST00000553039 CYP3A43Q9HB55 503 aa5.23□□□□□ -1.57
CKAP4-203ENST00000553039 RDH14Q9HBH5 336 aa5.23□□□□□ -1.57
CKAP4-203ENST00000553039 LRRC4Q9HBW1 653 aa5.23□□□□□ -1.57
CKAP4-203ENST00000553039 MLXIPLQ9NP71 852 aa5.23□□□□□ -1.57
CKAP4-203ENST00000553039 ACSS2Q9NR19 701 aa5.23□□□□□ -1.57
CKAP4-203ENST00000553039 OLFML3Q9NRN5 406 aa5.23□□□□□ -1.57
CKAP4-203ENST00000553039 TBC1D7Q9P0N9 293 aa5.23□□□□□ -1.57
CKAP4-203ENST00000553039 SOX13Q9UN79 622 aa5.23□□□□□ -1.57
CKAP4-203ENST00000553039 TMEM184BQ9Y519 407 aaPredicted RBP5.23□□□□□ -1.57
CKAP4-203ENST00000553039 COPG1Q9Y678 874 aaKnown RBP5.23□□□□□ -1.57
CKAP4-203ENST00000553039 RPS6KL1Q9Y6S9 549 aa5.23□□□□□ -1.57
CKAP4-203ENST00000553039 POLEQ07864 2286 aa5.22□□□□□ -1.57
CKAP4-203ENST00000553039 PLXNA2O75051 1894 aa5.22□□□□□ -1.57
CKAP4-203ENST00000553039 ZSCAN5CA6NGD5 496 aaPredicted RBP5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms