RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 RAB10P61026 200 aa12.42□□□□□ -0.42
HDAC7-230ENST00000552960 FGD3Q5JSP0 725 aa12.42□□□□□ -0.42
HDAC7-230ENST00000552960 ZNF470Q6ECI4 717 aa12.42□□□□□ -0.42
HDAC7-230ENST00000552960 ALKAL1Q6UXT8 129 aa12.42□□□□□ -0.42
HDAC7-230ENST00000552960 TMEM26Q6ZUK4 368 aa12.42□□□□□ -0.42
HDAC7-230ENST00000552960 PDZD4Q76G19 769 aaPredicted RBP12.42□□□□□ -0.42
HDAC7-230ENST00000552960 STRADAQ7RTN6 431 aa12.42□□□□□ -0.42
HDAC7-230ENST00000552960 SPPL2BQ8TCT7 592 aa12.42□□□□□ -0.42
HDAC7-230ENST00000552960 CAPNS2Q96L46 248 aa12.42□□□□□ -0.42
HDAC7-230ENST00000552960 SIK2Q9H0K1 926 aa12.42□□□□□ -0.42
HDAC7-230ENST00000552960 MRPL46Q9H2W6 279 aaKnown RBP12.42□□□□□ -0.42
HDAC7-230ENST00000552960 SUCOQ9UBS9 1254 aaKnown RBP12.42□□□□□ -0.42
HDAC7-230ENST00000552960 PADI4Q9UM07 663 aa12.42□□□□□ -0.42
HDAC7-230ENST00000552960 AURKAO14965 403 aa12.42□□□□□ -0.42
HDAC7-230ENST00000552960 NRP2O60462 931 aa12.42□□□□□ -0.42
HDAC7-230ENST00000552960 ADAMTS4O75173 837 aa12.42□□□□□ -0.42
HDAC7-230ENST00000552960 PMPCBO75439 489 aa12.42□□□□□ -0.42
HDAC7-230ENST00000552960 BEST1O76090 585 aa12.42□□□□□ -0.42
HDAC7-230ENST00000552960 SUPT7LO94864 414 aa12.42□□□□□ -0.42
HDAC7-230ENST00000552960 CDH13P55290 713 aa12.42□□□□□ -0.42
HDAC7-230ENST00000552960 CTBSQ01459 385 aa12.42□□□□□ -0.42
HDAC7-230ENST00000552960 HERC3Q15034 1050 aa12.42□□□□□ -0.42
HDAC7-230ENST00000552960 ZBTB6Q15916 424 aa12.42□□□□□ -0.42
HDAC7-230ENST00000552960 USP41Q3LFD5 358 aa12.42□□□□□ -0.42
HDAC7-230ENST00000552960 TTC39CQ8N584 583 aa12.42□□□□□ -0.42
HDAC7-230ENST00000552960 ARL10Q8N8L6 244 aa12.42□□□□□ -0.42
HDAC7-230ENST00000552960 TTC16Q8NEE8 873 aa12.42□□□□□ -0.42
HDAC7-230ENST00000552960 RANBP9Q96S59 729 aa12.42□□□□□ -0.42
HDAC7-230ENST00000552960 CASS4Q9NQ75 786 aa12.42□□□□□ -0.42
HDAC7-230ENST00000552960 MIOSQ9NXC5 875 aa12.42□□□□□ -0.42
HDAC7-230ENST00000552960 GTF2IRD1Q9UHL9 959 aa12.42□□□□□ -0.42
HDAC7-230ENST00000552960 ST3GAL5Q9UNP4 418 aa12.42□□□□□ -0.42
HDAC7-230ENST00000552960 ZBTB11O95625 1053 aaPredicted RBP12.41□□□□□ -0.42
HDAC7-230ENST00000552960 ATP6V1B2P21281 511 aa12.41□□□□□ -0.42
HDAC7-230ENST00000552960 TKTP29401 623 aaKnown RBP12.41□□□□□ -0.42
HDAC7-230ENST00000552960 C21orf59P57076 290 aa12.41□□□□□ -0.42
HDAC7-230ENST00000552960 CDH17Q12864 832 aa12.41□□□□□ -0.42
HDAC7-230ENST00000552960 TRAF2Q12933 501 aa12.41□□□□□ -0.42
HDAC7-230ENST00000552960 TSTD2Q5T7W7 516 aa12.41□□□□□ -0.42
HDAC7-230ENST00000552960 FAM35AQ86V20 835 aa12.41□□□□□ -0.42
HDAC7-230ENST00000552960 EDEM1Q92611 657 aa12.41□□□□□ -0.42
HDAC7-230ENST00000552960 C11orf84Q9BUA3 381 aaPredicted RBP12.41□□□□□ -0.42
HDAC7-230ENST00000552960 ZNF385DQ9H6B1 395 aa12.41□□□□□ -0.42
HDAC7-230ENST00000552960 FAIMQ9NVQ4 179 aa12.41□□□□□ -0.42
HDAC7-230ENST00000552960 DDIT4Q9NX09 232 aa12.41□□□□□ -0.42
HDAC7-230ENST00000552960 DUS2Q9NX74 493 aaKnown RBP12.41□□□□□ -0.42
HDAC7-230ENST00000552960 STAP1Q9ULZ2 295 aa12.41□□□□□ -0.42
HDAC7-230ENST00000552960 SQORQ9Y6N5 450 aa12.41□□□□□ -0.42
HDAC7-230ENST00000552960 CLOCKO15516 846 aa12.41□□□□□ -0.42
HDAC7-230ENST00000552960 OCM2P0CE71 109 aa12.41□□□□□ -0.42
HDAC7-230ENST00000552960 OCMP0CE72 109 aaPredicted RBP12.41□□□□□ -0.42
HDAC7-230ENST00000552960 CHRM3P20309 590 aa12.41□□□□□ -0.42
HDAC7-230ENST00000552960 STX1BP61266 288 aa12.41□□□□□ -0.42
HDAC7-230ENST00000552960 PMS2P3Q13401 168 aa12.41□□□□□ -0.42
HDAC7-230ENST00000552960 LRP8Q14114 963 aa12.41□□□□□ -0.42
HDAC7-230ENST00000552960 RFTN1Q14699 578 aaPredicted RBP12.41□□□□□ -0.42
HDAC7-230ENST00000552960 PCSK7Q16549 785 aa12.41□□□□□ -0.42
HDAC7-230ENST00000552960 VPS26BQ4G0F5 336 aa12.41□□□□□ -0.42
HDAC7-230ENST00000552960 SAMD4BQ5PRF9 694 aaKnown RBP12.41□□□□□ -0.42
HDAC7-230ENST00000552960 MFSD14CQ5VZR4 134 aa12.41□□□□□ -0.42
HDAC7-230ENST00000552960 C9orf57Q5W0N0 161 aa12.41□□□□□ -0.42
HDAC7-230ENST00000552960 ELMSAN1Q6PJG2 1045 aa12.41□□□□□ -0.42
HDAC7-230ENST00000552960 CROCCP3Q8IVE0 287 aa12.41□□□□□ -0.42
HDAC7-230ENST00000552960 HMGCLL1Q8TB92 370 aa12.41□□□□□ -0.42
HDAC7-230ENST00000552960 IRGQQ8WZA9 623 aa12.41□□□□□ -0.42
HDAC7-230ENST00000552960 ISL2Q96A47 359 aa12.41□□□□□ -0.42
HDAC7-230ENST00000552960 TCF12Q99081 682 aa12.41□□□□□ -0.42
HDAC7-230ENST00000552960 ADI1Q9BV57 179 aa12.41□□□□□ -0.42
HDAC7-230ENST00000552960 OSBPL2Q9H1P3 480 aa12.41□□□□□ -0.42
HDAC7-230ENST00000552960 MRPL40Q9NQ50 206 aaKnown RBP12.41□□□□□ -0.42
HDAC7-230ENST00000552960 DSEQ9UL01 958 aa12.41□□□□□ -0.42
HDAC7-230ENST00000552960 ANKRD6Q9Y2G4 727 aa12.41□□□□□ -0.42
HDAC7-230ENST00000552960 TIMM13Q9Y5L4 95 aaPredicted RBP12.41□□□□□ -0.42
HDAC7-230ENST00000552960 ZNF487B1APH4 448 aa12.41□□□□□ -0.42
HDAC7-230ENST00000552960 PTGESO14684 152 aa12.41□□□□□ -0.42
HDAC7-230ENST00000552960 NCAM1P13591 858 aa12.41□□□□□ -0.42
HDAC7-230ENST00000552960 CD247P20963 164 aa12.41□□□□□ -0.42
HDAC7-230ENST00000552960 ADSLP30566 484 aaPredicted RBP12.41□□□□□ -0.42
HDAC7-230ENST00000552960 MAP3K7CLP57077 242 aa12.41□□□□□ -0.42
HDAC7-230ENST00000552960 MAPRE2Q15555 327 aa12.41□□□□□ -0.42
HDAC7-230ENST00000552960 FUT11Q495W5 492 aa12.41□□□□□ -0.42
HDAC7-230ENST00000552960 NHSL2Q5HYW2 709 aa12.41□□□□□ -0.42
HDAC7-230ENST00000552960 CUZD1Q86UP6 607 aa12.41□□□□□ -0.42
HDAC7-230ENST00000552960 GPR180Q86V85 440 aa12.41□□□□□ -0.42
HDAC7-230ENST00000552960 MFSD6LQ8IWD5 586 aa12.41□□□□□ -0.42
HDAC7-230ENST00000552960 AFAP1L2Q8N4X5 818 aa12.41□□□□□ -0.42
HDAC7-230ENST00000552960 RDH11Q8TC12 318 aa12.41□□□□□ -0.42
HDAC7-230ENST00000552960 MAGEE2Q8TD90 523 aaPredicted RBP12.41□□□□□ -0.42
HDAC7-230ENST00000552960 OAZ3Q9UMX2 235 aa12.41□□□□□ -0.42
HDAC7-230ENST00000552960 PTGDR2Q9Y5Y4 395 aa12.41□□□□□ -0.42
HDAC7-230ENST00000552960 INPP4BO15327 924 aa12.4□□□□□ -0.42
HDAC7-230ENST00000552960 SEPT4O43236 478 aa12.4□□□□□ -0.42
HDAC7-230ENST00000552960 MGEA5O60502 916 aa12.4□□□□□ -0.42
HDAC7-230ENST00000552960 NOL3O60936 208 aaKnown RBP12.4□□□□□ -0.42
HDAC7-230ENST00000552960 C8BP07358 591 aa12.4□□□□□ -0.42
HDAC7-230ENST00000552960 NR4A1P22736 598 aa12.4□□□□□ -0.42
HDAC7-230ENST00000552960 HMOX2P30519 316 aa12.4□□□□□ -0.42
HDAC7-230ENST00000552960 HOXC8P31273 242 aa12.4□□□□□ -0.42
HDAC7-230ENST00000552960 THPOP40225 353 aa12.4□□□□□ -0.42
HDAC7-230ENST00000552960 CRYBB1P53674 252 aaPredicted RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms