RNA–Protein interactions for RNA: ENST00000552545.1

AC055716.2-201, humanhuman

BASIC

Gene AC055716.2, Length 2,441 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055716.2-201ENST00000552545 PTPRCAPQ14761 206 aa8.77□□□□□ -1.01
AC055716.2-201ENST00000552545 STARD3Q14849 445 aa8.77□□□□□ -1.01
AC055716.2-201ENST00000552545 SKIDA1Q1XH10 827 aa8.77□□□□□ -1.01
AC055716.2-201ENST00000552545 UNC5AQ6ZN44 842 aa8.77□□□□□ -1.01
AC055716.2-201ENST00000552545 GLT6D1Q7Z4J2 308 aa8.77□□□□□ -1.01
AC055716.2-201ENST00000552545 DSG4Q86SJ6 1040 aa8.77□□□□□ -1.01
AC055716.2-201ENST00000552545 ZSWIM9Q86XI8 627 aa8.77□□□□□ -1.01
AC055716.2-201ENST00000552545 NDUFAF2Q8N183 169 aa8.77□□□□□ -1.01
AC055716.2-201ENST00000552545 PIH1D2Q8WWB5 315 aa8.77□□□□□ -1.01
AC055716.2-201ENST00000552545 LRRC39Q96DD0 335 aa8.77□□□□□ -1.01
AC055716.2-201ENST00000552545 MFSD3Q96ES6 412 aa8.77□□□□□ -1.01
AC055716.2-201ENST00000552545 ZNF778Q96MU6 729 aa8.77□□□□□ -1.01
AC055716.2-201ENST00000552545 FAM129BQ96TA1 746 aa8.77□□□□□ -1.01
AC055716.2-201ENST00000552545 ARNT2Q9HBZ2 717 aa8.77□□□□□ -1.01
AC055716.2-201ENST00000552545 POLR3BQ9NW08 1133 aaPredicted RBP8.77□□□□□ -1.01
AC055716.2-201ENST00000552545 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.77□□□□□ -1.01
AC055716.2-201ENST00000552545 PLAAQ9Y263 795 aa8.77□□□□□ -1.01
AC055716.2-201ENST00000552545 MTF2Q9Y483 593 aaPredicted RBP8.77□□□□□ -1.01
AC055716.2-201ENST00000552545 SPO11Q9Y5K1 396 aa8.77□□□□□ -1.01
AC055716.2-201ENST00000552545 MAGEB16A2A368 324 aa8.76□□□□□ -1.01
AC055716.2-201ENST00000552545 HEATR9A2RTY3 570 aa8.76□□□□□ -1.01
AC055716.2-201ENST00000552545 KRBA1A5PL33 1030 aa8.76□□□□□ -1.01
AC055716.2-201ENST00000552545 C19orf67A6NJJ6 358 aa8.76□□□□□ -1.01
AC055716.2-201ENST00000552545 C16orf96A6NNT2 1141 aa8.76□□□□□ -1.01
AC055716.2-201ENST00000552545 AURKAO14965 403 aa8.76□□□□□ -1.01
AC055716.2-201ENST00000552545 NPC1O15118 1278 aa8.76□□□□□ -1.01
AC055716.2-201ENST00000552545 HTRA2O43464 458 aaPredicted RBP8.76□□□□□ -1.01
AC055716.2-201ENST00000552545 FZD6O60353 706 aa8.76□□□□□ -1.01
AC055716.2-201ENST00000552545 RNASEH1O60930 286 aaKnown RBP8.76□□□□□ -1.01
AC055716.2-201ENST00000552545 HNF1BP35680 557 aa8.76□□□□□ -1.01
AC055716.2-201ENST00000552545 GRIA4P48058 902 aa8.76□□□□□ -1.01
AC055716.2-201ENST00000552545 POLR2LP62875 67 aaKnown RBP8.76□□□□□ -1.01
AC055716.2-201ENST00000552545 ZNF805Q5CZA5 627 aa8.76□□□□□ -1.01
AC055716.2-201ENST00000552545 KIAA1211LQ6NV74 962 aa8.76□□□□□ -1.01
AC055716.2-201ENST00000552545 PKN3Q6P5Z2 889 aa8.76□□□□□ -1.01
AC055716.2-201ENST00000552545 UNC5BQ8IZJ1 945 aa8.76□□□□□ -1.01
AC055716.2-201ENST00000552545 GJD3Q8N144 294 aa8.76□□□□□ -1.01
AC055716.2-201ENST00000552545 MDGA1Q8NFP4 955 aa8.76□□□□□ -1.01
AC055716.2-201ENST00000552545 FBF1Q8TES7 1133 aa8.76□□□□□ -1.01
AC055716.2-201ENST00000552545 GANCQ8TET4 914 aa8.76□□□□□ -1.01
AC055716.2-201ENST00000552545 MSANTD3Q96H12 275 aa8.76□□□□□ -1.01
AC055716.2-201ENST00000552545 NECAB3Q96P71 396 aaPredicted RBP8.76□□□□□ -1.01
AC055716.2-201ENST00000552545 RUFY1Q96T51 708 aa8.76□□□□□ -1.01
AC055716.2-201ENST00000552545 OSBPL1AQ9BXW6 950 aa8.76□□□□□ -1.01
AC055716.2-201ENST00000552545 GPR63Q9BZJ6 419 aa8.76□□□□□ -1.01
AC055716.2-201ENST00000552545 LMAN1LQ9HAT1 526 aa8.76□□□□□ -1.01
AC055716.2-201ENST00000552545 BPIFA1Q9NP55 256 aa8.76□□□□□ -1.01
AC055716.2-201ENST00000552545 ZNF446Q9NWS9 450 aa8.76□□□□□ -1.01
AC055716.2-201ENST00000552545 SLC2A6Q9UGQ3 507 aa8.76□□□□□ -1.01
AC055716.2-201ENST00000552545 PHTF1Q9UMS5 762 aa8.76□□□□□ -1.01
AC055716.2-201ENST00000552545 SOX13Q9UN79 622 aa8.76□□□□□ -1.01
AC055716.2-201ENST00000552545 TLDC2A0PJX2 215 aa8.76□□□□□ -1.01
AC055716.2-201ENST00000552545 SHISA7A6NL88 538 aa8.76□□□□□ -1.01
AC055716.2-201ENST00000552545 GOLGA8KD6RF30 607 aa8.76□□□□□ -1.01
AC055716.2-201ENST00000552545 C1QTNF3-AMACRE9PGA6 284 aa8.76□□□□□ -1.01
AC055716.2-201ENST00000552545 GOLGA8TH3BQL2 631 aa8.76□□□□□ -1.01
AC055716.2-201ENST00000552545 CCL22O00626 93 aa8.76□□□□□ -1.01
AC055716.2-201ENST00000552545 CRTAMO95727 393 aa8.76□□□□□ -1.01
AC055716.2-201ENST00000552545 SHBGP04278 402 aa8.76□□□□□ -1.01
AC055716.2-201ENST00000552545 MRPS21P82921 87 aaKnown RBP8.76□□□□□ -1.01
AC055716.2-201ENST00000552545 CKAP5Q14008 2032 aa8.76□□□□□ -1.01
AC055716.2-201ENST00000552545 FBXO43Q4G163 708 aa8.76□□□□□ -1.01
AC055716.2-201ENST00000552545 ESRP1Q6NXG1 681 aaKnown RBP8.76□□□□□ -1.01
AC055716.2-201ENST00000552545 FBXL19Q6PCT2 694 aa8.76□□□□□ -1.01
AC055716.2-201ENST00000552545 Q6ZS52 159 aa8.76□□□□□ -1.01
AC055716.2-201ENST00000552545 TRMT11Q7Z4G4 463 aaKnown RBP8.76□□□□□ -1.01
AC055716.2-201ENST00000552545 RELL1Q8IUW5 271 aa8.76□□□□□ -1.01
AC055716.2-201ENST00000552545 MREGQ8N565 214 aa8.76□□□□□ -1.01
AC055716.2-201ENST00000552545 BRSK1Q8TDC3 778 aa8.76□□□□□ -1.01
AC055716.2-201ENST00000552545 SHDQ96IW2 340 aa8.76□□□□□ -1.01
AC055716.2-201ENST00000552545 LRIG1Q96JA1 1093 aa8.76□□□□□ -1.01
AC055716.2-201ENST00000552545 FCRL3Q96P31 734 aaPredicted RBP8.76□□□□□ -1.01
AC055716.2-201ENST00000552545 NAT9Q9BTE0 207 aa8.76□□□□□ -1.01
AC055716.2-201ENST00000552545 FUT8Q9BYC5 575 aa8.76□□□□□ -1.01
AC055716.2-201ENST00000552545 FOXQ1Q9C009 403 aa8.76□□□□□ -1.01
AC055716.2-201ENST00000552545 PHACTR1Q9C0D0 580 aa8.76□□□□□ -1.01
AC055716.2-201ENST00000552545 SLC6A17Q9H1V8 727 aa8.76□□□□□ -1.01
AC055716.2-201ENST00000552545 CENPHQ9H3R5 247 aa8.76□□□□□ -1.01
AC055716.2-201ENST00000552545 WNT16Q9UBV4 365 aa8.76□□□□□ -1.01
AC055716.2-201ENST00000552545 PPM1HQ9ULR3 514 aa8.76□□□□□ -1.01
AC055716.2-201ENST00000552545 MRPS17Q9Y2R5 130 aaKnown RBP8.76□□□□□ -1.01
AC055716.2-201ENST00000552545 TCAF1Q9Y4C2 921 aa8.76□□□□□ -1.01
AC055716.2-201ENST00000552545 A0A087WUV0 522 aaPredicted RBP8.75□□□□□ -1.01
AC055716.2-201ENST00000552545 A0A0J9YYE9 177 aa8.75□□□□□ -1.01
AC055716.2-201ENST00000552545 C1orf232A0A0U1RR37 186 aa8.75□□□□□ -1.01
AC055716.2-201ENST00000552545 FAM170BA6NMN3 283 aa8.75□□□□□ -1.01
AC055716.2-201ENST00000552545 C2orf81A6NN90 581 aa8.75□□□□□ -1.01
AC055716.2-201ENST00000552545 POC1B-GALNT4F8VUJ3 575 aa8.75□□□□□ -1.01
AC055716.2-201ENST00000552545 ADAM23O75077 832 aa8.75□□□□□ -1.01
AC055716.2-201ENST00000552545 CLDN7O95471 211 aa8.75□□□□□ -1.01
AC055716.2-201ENST00000552545 TRBC1P01850 177 aa8.75□□□□□ -1.01
AC055716.2-201ENST00000552545 COL9A1P20849 921 aa8.75□□□□□ -1.01
AC055716.2-201ENST00000552545 SLCO1A2P46721 670 aa8.75□□□□□ -1.01
AC055716.2-201ENST00000552545 PRKCQQ04759 706 aa8.75□□□□□ -1.01
AC055716.2-201ENST00000552545 CCINQ13939 588 aa8.75□□□□□ -1.01
AC055716.2-201ENST00000552545 CRYMQ14894 314 aa8.75□□□□□ -1.01
AC055716.2-201ENST00000552545 CNGA3Q16281 694 aa8.75□□□□□ -1.01
AC055716.2-201ENST00000552545 UGP2Q16851 508 aa8.75□□□□□ -1.01
AC055716.2-201ENST00000552545 ANKRD20A4Q4UJ75 823 aa8.75□□□□□ -1.01
AC055716.2-201ENST00000552545 BRAT1Q6PJG6 821 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms