RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 ECI2O75521 394 aa2.54□□□□□ -2
CPSF6-207ENST00000551516 ZFPL1O95159 310 aa2.54□□□□□ -2
CPSF6-207ENST00000551516 NDUFA10O95299 355 aa2.54□□□□□ -2
CPSF6-207ENST00000551516 TNFRSF6BO95407 300 aa2.54□□□□□ -2
CPSF6-207ENST00000551516 TOP3BO95985 862 aaKnown RBP2.54□□□□□ -2
CPSF6-207ENST00000551516 ANXA6P08133 673 aa2.54□□□□□ -2
CPSF6-207ENST00000551516 HNRNPA1P09651 372 aaKnown RBP eCLIP2.54□□□□□ -2
CPSF6-207ENST00000551516 HOXA5P20719 270 aa2.54□□□□□ -2
CPSF6-207ENST00000551516 PROZP22891 400 aa2.54□□□□□ -2
CPSF6-207ENST00000551516 GATA3P23771 443 aa2.54□□□□□ -2
CPSF6-207ENST00000551516 DDX6P26196 483 aaKnown RBP eCLIP2.54□□□□□ -2
CPSF6-207ENST00000551516 SLC5A2P31639 672 aa2.54□□□□□ -2
CPSF6-207ENST00000551516 UQCRC1P31930 480 aa2.54□□□□□ -2
CPSF6-207ENST00000551516 KIF5BP33176 963 aa2.54□□□□□ -2
CPSF6-207ENST00000551516 MCM5P33992 734 aa2.54□□□□□ -2
CPSF6-207ENST00000551516 ALDH7A1P49419 539 aaKnown RBP2.54□□□□□ -2
CPSF6-207ENST00000551516 RARRES1P49788 294 aa2.54□□□□□ -2
CPSF6-207ENST00000551516 VAV2P52735 878 aa2.54□□□□□ -2
CPSF6-207ENST00000551516 BCAT1P54687 386 aa2.54□□□□□ -2
CPSF6-207ENST00000551516 AP2B1P63010 937 aa2.54□□□□□ -2
CPSF6-207ENST00000551516 ZXDBP98169 803 aa2.54□□□□□ -2
CPSF6-207ENST00000551516 LAMTOR4Q0VGL1 99 aa2.54□□□□□ -2
CPSF6-207ENST00000551516 SRSF5Q13243 272 aaKnown RBP2.54□□□□□ -2
CPSF6-207ENST00000551516 ATP1A4Q13733 1029 aa2.54□□□□□ -2
CPSF6-207ENST00000551516 CAPSQ13938 189 aa2.54□□□□□ -2
CPSF6-207ENST00000551516 MLF2Q15773 248 aaPredicted RBP2.54□□□□□ -2
CPSF6-207ENST00000551516 CCDC6Q16204 474 aa2.54□□□□□ -2
CPSF6-207ENST00000551516 TAF12Q16514 161 aa2.54□□□□□ -2
CPSF6-207ENST00000551516 UPP1Q16831 310 aa2.54□□□□□ -2
CPSF6-207ENST00000551516 GEN1Q17RS7 908 aa2.54□□□□□ -2
CPSF6-207ENST00000551516 BEAN1Q3B7T3 259 aa2.54□□□□□ -2
CPSF6-207ENST00000551516 XKR3Q5GH77 459 aa2.54□□□□□ -2
CPSF6-207ENST00000551516 DEPDC1Q5TB30 811 aa2.54□□□□□ -2
CPSF6-207ENST00000551516 JAKMIP3Q5VZ66 844 aa2.54□□□□□ -2
CPSF6-207ENST00000551516 PLA2G4FQ68DD2 849 aa2.54□□□□□ -2
CPSF6-207ENST00000551516 CES5AQ6NT32 575 aa2.54□□□□□ -2
CPSF6-207ENST00000551516 RINT1Q6NUQ1 792 aa2.54□□□□□ -2
CPSF6-207ENST00000551516 MIS18BP1Q6P0N0 1132 aa2.54□□□□□ -2
CPSF6-207ENST00000551516 FUT10Q6P4F1 479 aa2.54□□□□□ -2
CPSF6-207ENST00000551516 DCLRE1AQ6PJP8 1040 aa2.54□□□□□ -2
CPSF6-207ENST00000551516 TSSK4Q6SA08 328 aa2.54□□□□□ -2
CPSF6-207ENST00000551516 PRSS55Q6UWB4 352 aaPredicted RBP2.54□□□□□ -2
CPSF6-207ENST00000551516 RTL10Q7L3V2 364 aa2.54□□□□□ -2
CPSF6-207ENST00000551516 IZUMO1Q8IYV9 350 aa2.54□□□□□ -2
CPSF6-207ENST00000551516 FAM109AQ8N4B1 249 aa2.54□□□□□ -2
CPSF6-207ENST00000551516 ZNF276Q8N554 614 aa2.54□□□□□ -2
CPSF6-207ENST00000551516 TTC9BQ8N6N2 239 aa2.54□□□□□ -2
CPSF6-207ENST00000551516 ZNF713Q8N859 430 aaPredicted RBP2.54□□□□□ -2
CPSF6-207ENST00000551516 B3GALNT2Q8NCR0 500 aa2.54□□□□□ -2
CPSF6-207ENST00000551516 LRRC15Q8TF66 581 aa2.54□□□□□ -2
CPSF6-207ENST00000551516 TMEM171Q8WVE6 324 aa2.54□□□□□ -2
CPSF6-207ENST00000551516 OSCP1Q8WVF1 389 aa2.54□□□□□ -2
CPSF6-207ENST00000551516 WDR60Q8WVS4 1066 aa2.54□□□□□ -2
CPSF6-207ENST00000551516 RSC1A1Q92681 617 aa2.54□□□□□ -2
CPSF6-207ENST00000551516 CUL5Q93034 780 aa2.54□□□□□ -2
CPSF6-207ENST00000551516 TMEM143Q96AN5 459 aa2.54□□□□□ -2
CPSF6-207ENST00000551516 TCEAL4Q96EI5 215 aa2.54□□□□□ -2
CPSF6-207ENST00000551516 PTCD3Q96EY7 689 aaKnown RBP2.54□□□□□ -2
CPSF6-207ENST00000551516 ZDHHC12Q96GR4 267 aa2.54□□□□□ -2
CPSF6-207ENST00000551516 ZBTB45Q96K62 511 aaPredicted RBP2.54□□□□□ -2
CPSF6-207ENST00000551516 ZSCAN31Q96LW9 406 aaPredicted RBP2.54□□□□□ -2
CPSF6-207ENST00000551516 BBC3Q96PG8 261 aaPredicted RBP2.54□□□□□ -2
CPSF6-207ENST00000551516 FIZ1Q96SL8 496 aa2.54□□□□□ -2
CPSF6-207ENST00000551516 ZNF577Q9BSK1 485 aa2.54□□□□□ -2
CPSF6-207ENST00000551516 RTKNQ9BST9 563 aa2.54□□□□□ -2
CPSF6-207ENST00000551516 TEX101Q9BY14 249 aa2.54□□□□□ -2
CPSF6-207ENST00000551516 MRPL9Q9BYD2 267 aaKnown RBP2.54□□□□□ -2
CPSF6-207ENST00000551516 AMBRA1Q9C0C7 1298 aa2.54□□□□□ -2
CPSF6-207ENST00000551516 KLC2Q9H0B6 622 aa2.54□□□□□ -2
CPSF6-207ENST00000551516 NXF3Q9H4D5 531 aaKnown RBP2.54□□□□□ -2
CPSF6-207ENST00000551516 ZNF768Q9H5H4 540 aaKnown RBP2.54□□□□□ -2
CPSF6-207ENST00000551516 AZI2Q9H6S1 392 aa2.54□□□□□ -2
CPSF6-207ENST00000551516 EPS8L2Q9H6S3 715 aa2.54□□□□□ -2
CPSF6-207ENST00000551516 UNKLQ9H9P5 680 aaKnown RBP2.54□□□□□ -2
CPSF6-207ENST00000551516 SAYSD1Q9NPB0 183 aa2.54□□□□□ -2
CPSF6-207ENST00000551516 CASS4Q9NQ75 786 aa2.54□□□□□ -2
CPSF6-207ENST00000551516 ITM2CQ9NQX7 267 aa2.54□□□□□ -2
CPSF6-207ENST00000551516 SH3GLB2Q9NR46 395 aa2.54□□□□□ -2
CPSF6-207ENST00000551516 TBCCD1Q9NVR7 557 aa2.54□□□□□ -2
CPSF6-207ENST00000551516 CEP72Q9P209 647 aa2.54□□□□□ -2
CPSF6-207ENST00000551516 SUCLA2Q9P2R7 463 aaPredicted RBP2.54□□□□□ -2
CPSF6-207ENST00000551516 MTRRQ9UBK8 725 aa2.54□□□□□ -2
CPSF6-207ENST00000551516 NKX1-2Q9UD57 310 aaPredicted RBP2.54□□□□□ -2
CPSF6-207ENST00000551516 CNOT11Q9UKZ1 510 aaKnown RBP2.54□□□□□ -2
CPSF6-207ENST00000551516 GPR52Q9Y2T5 361 aa2.54□□□□□ -2
CPSF6-207ENST00000551516 ZBTB32Q9Y2Y4 487 aaPredicted RBP2.54□□□□□ -2
CPSF6-207ENST00000551516 TESMINQ9Y4I5 508 aa2.54□□□□□ -2
CPSF6-207ENST00000551516 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.54□□□□□ -2
CPSF6-207ENST00000551516 ZFP37Q9Y6Q3 630 aaPredicted RBP2.54□□□□□ -2
CPSF6-207ENST00000551516 RELNP78509 3460 aa2.54□□□□□ -2
CPSF6-207ENST00000551516 BSNQ9UPA5 3926 aa2.54□□□□□ -2
CPSF6-207ENST00000551516 HECTD1Q9ULT8 2610 aa2.54□□□□□ -2
CPSF6-207ENST00000551516 PCNX2A6NKB5 2137 aa2.53□□□□□ -2
CPSF6-207ENST00000551516 CNTNAP2Q9UHC6 1331 aa2.53□□□□□ -2
CPSF6-207ENST00000551516 C2orf16Q68DN1 1984 aa2.53□□□□□ -2
CPSF6-207ENST00000551516 A0A087WWV3 80 aa2.53□□□□□ -2
CPSF6-207ENST00000551516 WDR27A2RRH5 827 aa2.53□□□□□ -2
CPSF6-207ENST00000551516 MYBPHLA2RUH7 354 aa2.53□□□□□ -2
CPSF6-207ENST00000551516 EFCAB8A8MWE9 144 aa2.53□□□□□ -2
CPSF6-207ENST00000551516 J3KTA2 159 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms