RNA–Protein interactions for RNA: ENST00000550847.1

RAB3IP-214, Transcript of RAB3A interacting protein, humanhuman

TSL 3 BASIC

Gene RAB3IP, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-214ENST00000550847 PSMD10O75832 226 aa4.77□□□□□ -1.65
RAB3IP-214ENST00000550847 KAT7O95251 611 aa4.77□□□□□ -1.65
RAB3IP-214ENST00000550847 IGKV2-30P06310 120 aa4.77□□□□□ -1.65
RAB3IP-214ENST00000550847 GALTP07902 379 aa4.77□□□□□ -1.65
RAB3IP-214ENST00000550847 TMIGD3P0DMS9 266 aaPredicted RBP4.77□□□□□ -1.65
RAB3IP-214ENST00000550847 MATN1P21941 496 aa4.77□□□□□ -1.65
RAB3IP-214ENST00000550847 HOXA13P31271 388 aaPredicted RBP4.77□□□□□ -1.65
RAB3IP-214ENST00000550847 FMO4P31512 558 aa4.77□□□□□ -1.65
RAB3IP-214ENST00000550847 NR4A2P43354 598 aa4.77□□□□□ -1.65
RAB3IP-214ENST00000550847 STAT2P52630 851 aa4.77□□□□□ -1.65
RAB3IP-214ENST00000550847 PMS2P54278 862 aa4.77□□□□□ -1.65
RAB3IP-214ENST00000550847 MFAP4P55083 255 aa4.77□□□□□ -1.65
RAB3IP-214ENST00000550847 SNTB1Q13884 538 aaKnown RBP4.77□□□□□ -1.65
RAB3IP-214ENST00000550847 FRG1Q14331 258 aaKnown RBP4.77□□□□□ -1.65
RAB3IP-214ENST00000550847 KPNB1Q14974 876 aaKnown RBP4.77□□□□□ -1.65
RAB3IP-214ENST00000550847 C10orf25Q5T742 122 aa4.77□□□□□ -1.65
RAB3IP-214ENST00000550847 FAM171A1Q5VUB5 890 aa4.77□□□□□ -1.65
RAB3IP-214ENST00000550847 ATG9BQ674R7 924 aa4.77□□□□□ -1.65
RAB3IP-214ENST00000550847 KIAA0930Q6ICG6 404 aaPredicted RBP4.77□□□□□ -1.65
RAB3IP-214ENST00000550847 SHQ1Q6PI26 577 aaKnown RBP4.77□□□□□ -1.65
RAB3IP-214ENST00000550847 SLC30A9Q6PML9 568 aa4.77□□□□□ -1.65
RAB3IP-214ENST00000550847 SHC4Q6S5L8 630 aa4.77□□□□□ -1.65
RAB3IP-214ENST00000550847 VSTM1Q6UX27 236 aa4.77□□□□□ -1.65
RAB3IP-214ENST00000550847 UBE2Q1Q7Z7E8 422 aa4.77□□□□□ -1.65
RAB3IP-214ENST00000550847 CCAR2Q8N163 923 aaKnown RBP4.77□□□□□ -1.65
RAB3IP-214ENST00000550847 ZNF619Q8N2I2 560 aa4.77□□□□□ -1.65
RAB3IP-214ENST00000550847 MINDY1Q8N5J2 469 aa4.77□□□□□ -1.65
RAB3IP-214ENST00000550847 NANOGP1Q8N7R0 232 aa4.77□□□□□ -1.65
RAB3IP-214ENST00000550847 PRSS3P2Q8NHM4 247 aa4.77□□□□□ -1.65
RAB3IP-214ENST00000550847 KIF18AQ8NI77 898 aa4.77□□□□□ -1.65
RAB3IP-214ENST00000550847 WIPF2Q8TF74 440 aaPredicted RBP4.77□□□□□ -1.65
RAB3IP-214ENST00000550847 GRK7Q8WTQ7 553 aa4.77□□□□□ -1.65
RAB3IP-214ENST00000550847 TMCO6Q96DC7 493 aa4.77□□□□□ -1.65
RAB3IP-214ENST00000550847 CFAP57Q96MR6 1250 aa4.77□□□□□ -1.65
RAB3IP-214ENST00000550847 DGAT2Q96PD7 388 aa4.77□□□□□ -1.65
RAB3IP-214ENST00000550847 SIGLEC11Q96RL6 698 aa4.77□□□□□ -1.65
RAB3IP-214ENST00000550847 ELOVL1Q9BW60 279 aa4.77□□□□□ -1.65
RAB3IP-214ENST00000550847 ST6GALNAC4Q9H4F1 302 aa4.77□□□□□ -1.65
RAB3IP-214ENST00000550847 PFDN4Q9NQP4 134 aa4.77□□□□□ -1.65
RAB3IP-214ENST00000550847 ADPRHL2Q9NX46 363 aa4.77□□□□□ -1.65
RAB3IP-214ENST00000550847 TRMT1Q9NXH9 659 aaKnown RBP4.77□□□□□ -1.65
RAB3IP-214ENST00000550847 DNAJB9Q9UBS3 223 aa4.77□□□□□ -1.65
RAB3IP-214ENST00000550847 NENFQ9UMX5 172 aa4.77□□□□□ -1.65
RAB3IP-214ENST00000550847 PPIEQ9UNP9 301 aaKnown RBP4.77□□□□□ -1.65
RAB3IP-214ENST00000550847 A0A0U1RQK1 487 aa4.76□□□□□ -1.65
RAB3IP-214ENST00000550847 TCRBV21S2A2A0A5A6 115 aa4.76□□□□□ -1.65
RAB3IP-214ENST00000550847 TRBC2A0A5B9 178 aa4.76□□□□□ -1.65
RAB3IP-214ENST00000550847 ZNF320A2RRD8 509 aa4.76□□□□□ -1.65
RAB3IP-214ENST00000550847 TTC36A6NLP5 189 aa4.76□□□□□ -1.65
RAB3IP-214ENST00000550847 LRRC53A6NM62 1247 aa4.76□□□□□ -1.65
RAB3IP-214ENST00000550847 H0YAE9 185 aa4.76□□□□□ -1.65
RAB3IP-214ENST00000550847 CHL1O00533 1208 aa4.76□□□□□ -1.65
RAB3IP-214ENST00000550847 IPO8O15397 1037 aaKnown RBP4.76□□□□□ -1.65
RAB3IP-214ENST00000550847 PAPSS1O43252 624 aaPredicted RBP4.76□□□□□ -1.65
RAB3IP-214ENST00000550847 CEP104O60308 925 aa4.76□□□□□ -1.65
RAB3IP-214ENST00000550847 HBP1O60381 514 aa4.76□□□□□ -1.65
RAB3IP-214ENST00000550847 SEC31AO94979 1220 aaKnown RBP4.76□□□□□ -1.65
RAB3IP-214ENST00000550847 IPO7O95373 1038 aaKnown RBP4.76□□□□□ -1.65
RAB3IP-214ENST00000550847 PRF1P14222 555 aa4.76□□□□□ -1.65
RAB3IP-214ENST00000550847 ZNF131P52739 623 aa4.76□□□□□ -1.65
RAB3IP-214ENST00000550847 EFNA5P52803 228 aa4.76□□□□□ -1.65
RAB3IP-214ENST00000550847 MRPS5P82675 430 aaKnown RBP4.76□□□□□ -1.65
RAB3IP-214ENST00000550847 GHRHRQ02643 423 aa4.76□□□□□ -1.65
RAB3IP-214ENST00000550847 CAMK2DQ13557 499 aa4.76□□□□□ -1.65
RAB3IP-214ENST00000550847 ALCAMQ13740 583 aa4.76□□□□□ -1.65
RAB3IP-214ENST00000550847 IL13RA2Q14627 380 aa4.76□□□□□ -1.65
RAB3IP-214ENST00000550847 AP5B1Q2VPB7 878 aa4.76□□□□□ -1.65
RAB3IP-214ENST00000550847 CCDC158Q5M9N0 1113 aa4.76□□□□□ -1.65
RAB3IP-214ENST00000550847 CC2D1BQ5T0F9 858 aaKnown RBP4.76□□□□□ -1.65
RAB3IP-214ENST00000550847 ISM2Q6H9L7 571 aa4.76□□□□□ -1.65
RAB3IP-214ENST00000550847 CAVIN1Q6NZI2 390 aaKnown RBP4.76□□□□□ -1.65
RAB3IP-214ENST00000550847 GLDNQ6ZMI3 551 aaPredicted RBP4.76□□□□□ -1.65
RAB3IP-214ENST00000550847 TECPR1Q7Z6L1 1165 aa4.76□□□□□ -1.65
RAB3IP-214ENST00000550847 TADA2BQ86TJ2 420 aa4.76□□□□□ -1.65
RAB3IP-214ENST00000550847 RHPN2Q8IUC4 686 aa4.76□□□□□ -1.65
RAB3IP-214ENST00000550847 PSPC1Q8WXF1 523 aaKnown RBP4.76□□□□□ -1.65
RAB3IP-214ENST00000550847 MMABQ96EY8 250 aaPredicted RBP4.76□□□□□ -1.65
RAB3IP-214ENST00000550847 MYCBPQ99417 103 aaPredicted RBP4.76□□□□□ -1.65
RAB3IP-214ENST00000550847 NAA11Q9BSU3 229 aaPredicted RBP4.76□□□□□ -1.65
RAB3IP-214ENST00000550847 SYT17Q9BSW7 474 aa4.76□□□□□ -1.65
RAB3IP-214ENST00000550847 TM2D2Q9BX73 214 aa4.76□□□□□ -1.65
RAB3IP-214ENST00000550847 HEMGNQ9BXL5 484 aa4.76□□□□□ -1.65
RAB3IP-214ENST00000550847 HDHD5Q9BXW7 423 aa4.76□□□□□ -1.65
RAB3IP-214ENST00000550847 GLIS2Q9BZE0 524 aaPredicted RBP4.76□□□□□ -1.65
RAB3IP-214ENST00000550847 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.76□□□□□ -1.65
RAB3IP-214ENST00000550847 ABCG4Q9H172 646 aa4.76□□□□□ -1.65
RAB3IP-214ENST00000550847 PDRG1Q9NUG6 133 aa4.76□□□□□ -1.65
RAB3IP-214ENST00000550847 KIAA1456Q9P272 454 aa4.76□□□□□ -1.65
RAB3IP-214ENST00000550847 TUBE1Q9UJT0 475 aa4.76□□□□□ -1.65
RAB3IP-214ENST00000550847 LOC100509620A0A075B734 347 aa4.75□□□□□ -1.65
RAB3IP-214ENST00000550847 LY6G6EA0A0G2JKS1 128 aa4.75□□□□□ -1.65
RAB3IP-214ENST00000550847 FAM90A8PA6NJQ4 464 aa4.75□□□□□ -1.65
RAB3IP-214ENST00000550847 DDX39AO00148 427 aaKnown RBP4.75□□□□□ -1.65
RAB3IP-214ENST00000550847 STX6O43752 255 aa4.75□□□□□ -1.65
RAB3IP-214ENST00000550847 RNF8O76064 485 aa4.75□□□□□ -1.65
RAB3IP-214ENST00000550847 RECQL5O94762 991 aaPredicted RBP4.75□□□□□ -1.65
RAB3IP-214ENST00000550847 IGHDP01880 384 aa4.75□□□□□ -1.65
RAB3IP-214ENST00000550847 FAM90A13PP0C7W8 464 aa4.75□□□□□ -1.65
RAB3IP-214ENST00000550847 FAM90A24PP0C7X0 464 aa4.75□□□□□ -1.65
RAB3IP-214ENST00000550847 P4HA1P13674 534 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms