RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 XPAP23025 273 aaPredicted RBP13.54□□□□□ -0.24
NUP188-211ENST00000550219 ACTN2P35609 894 aa13.54□□□□□ -0.24
NUP188-211ENST00000550219 SSR1P43307 286 aaKnown RBP13.54□□□□□ -0.24
NUP188-211ENST00000550219 DUSP3P51452 185 aaPredicted RBP13.54□□□□□ -0.24
NUP188-211ENST00000550219 TPI1P60174 286 aa13.54□□□□□ -0.24
NUP188-211ENST00000550219 GNG11P61952 73 aa13.54□□□□□ -0.24
NUP188-211ENST00000550219 ETF1P62495 437 aaKnown RBP13.54□□□□□ -0.24
NUP188-211ENST00000550219 GABREP78334 506 aa13.54□□□□□ -0.24
NUP188-211ENST00000550219 TCEA2Q15560 299 aa13.54□□□□□ -0.24
NUP188-211ENST00000550219 DPYSL2Q16555 572 aa13.54□□□□□ -0.24
NUP188-211ENST00000550219 CA9Q16790 459 aa13.54□□□□□ -0.24
NUP188-211ENST00000550219 ZCCHC8Q6NZY4 707 aaKnown RBP13.54□□□□□ -0.24
NUP188-211ENST00000550219 GUSBP11Q6P575 273 aa13.54□□□□□ -0.24
NUP188-211ENST00000550219 EFL1Q7Z2Z2 1120 aaKnown RBP13.54□□□□□ -0.24
NUP188-211ENST00000550219 TTC7BQ86TV6 843 aa13.54□□□□□ -0.24
NUP188-211ENST00000550219 PLPP6Q8IY26 295 aa13.54□□□□□ -0.24
NUP188-211ENST00000550219 KATNAL2Q8IYT4 538 aa13.54□□□□□ -0.24
NUP188-211ENST00000550219 SNIP1Q8TAD8 396 aaKnown RBP13.54□□□□□ -0.24
NUP188-211ENST00000550219 NAF1Q96HR8 494 aaKnown RBP13.54□□□□□ -0.24
NUP188-211ENST00000550219 WDR24Q96S15 920 aa13.54□□□□□ -0.24
NUP188-211ENST00000550219 C1QTNF2Q9BXJ5 285 aa13.54□□□□□ -0.24
NUP188-211ENST00000550219 TCEAL2Q9H3H9 227 aaPredicted RBP13.54□□□□□ -0.24
NUP188-211ENST00000550219 RETREG1Q9H6L5 497 aa13.54□□□□□ -0.24
NUP188-211ENST00000550219 CATSPERBQ9H7T0 1116 aa13.54□□□□□ -0.24
NUP188-211ENST00000550219 SYNDIG1Q9H7V2 258 aa13.54□□□□□ -0.24
NUP188-211ENST00000550219 ZWILCHQ9H900 591 aa13.54□□□□□ -0.24
NUP188-211ENST00000550219 DDX56Q9NY93 547 aaKnown RBP13.54□□□□□ -0.24
NUP188-211ENST00000550219 APOBEC3BQ9UH17 382 aaKnown RBP13.54□□□□□ -0.24
NUP188-211ENST00000550219 KLF15Q9UIH9 416 aa13.54□□□□□ -0.24
NUP188-211ENST00000550219 AP4E1Q9UPM8 1137 aa13.54□□□□□ -0.24
NUP188-211ENST00000550219 COQ6Q9Y2Z9 468 aa13.54□□□□□ -0.24
NUP188-211ENST00000550219 U3KQA8 63 aa13.54□□□□□ -0.24
NUP188-211ENST00000550219 DSPP15924 2871 aaKnown RBP13.53□□□□□ -0.24
NUP188-211ENST00000550219 CXorf51AA0A1B0GTR3 108 aa13.53□□□□□ -0.24
NUP188-211ENST00000550219 C3orf70A6NLC5 250 aaPredicted RBP13.53□□□□□ -0.24
NUP188-211ENST00000550219 ZNF487B1APH4 448 aa13.53□□□□□ -0.24
NUP188-211ENST00000550219 FANCGO15287 622 aa13.53□□□□□ -0.24
NUP188-211ENST00000550219 USP12O75317 370 aa13.53□□□□□ -0.24
NUP188-211ENST00000550219 TM7SF2O76062 418 aa13.53□□□□□ -0.24
NUP188-211ENST00000550219 TUBB4AP04350 444 aa13.53□□□□□ -0.24
NUP188-211ENST00000550219 MARCKSL1P49006 195 aa13.53□□□□□ -0.24
NUP188-211ENST00000550219 ZNF135P52742 658 aaPredicted RBP13.53□□□□□ -0.24
NUP188-211ENST00000550219 PFN3P60673 137 aa13.53□□□□□ -0.24
NUP188-211ENST00000550219 EIF2B5Q13144 721 aaKnown RBP13.53□□□□□ -0.24
NUP188-211ENST00000550219 C1orf61Q13536 156 aa13.53□□□□□ -0.24
NUP188-211ENST00000550219 RPS6KA1Q15418 735 aa13.53□□□□□ -0.24
NUP188-211ENST00000550219 TAZQ16635 292 aa13.53□□□□□ -0.24
NUP188-211ENST00000550219 SMTNL2Q2TAL5 461 aa13.53□□□□□ -0.24
NUP188-211ENST00000550219 TBC1D25Q3MII6 688 aa13.53□□□□□ -0.24
NUP188-211ENST00000550219 CFAP58Q5T655 872 aa13.53□□□□□ -0.24
NUP188-211ENST00000550219 VSIG1Q86XK7 387 aa13.53□□□□□ -0.24
NUP188-211ENST00000550219 PHACTR4Q8IZ21 702 aa13.53□□□□□ -0.24
NUP188-211ENST00000550219 ALG3Q92685 438 aa13.53□□□□□ -0.24
NUP188-211ENST00000550219 CELF6Q96J87 481 aaKnown RBP13.53□□□□□ -0.24
NUP188-211ENST00000550219 FCRL3Q96P31 734 aaPredicted RBP13.53□□□□□ -0.24
NUP188-211ENST00000550219 LENG8Q96PV6 779 aaPredicted RBP13.53□□□□□ -0.24
NUP188-211ENST00000550219 LGMNQ99538 433 aa13.53□□□□□ -0.24
NUP188-211ENST00000550219 IL12RB2Q99665 862 aa13.53□□□□□ -0.24
NUP188-211ENST00000550219 C1QTNF7Q9BXJ2 289 aa13.53□□□□□ -0.24
NUP188-211ENST00000550219 LHX3Q9UBR4 397 aa13.53□□□□□ -0.24
NUP188-211ENST00000550219 UBA2Q9UBT2 640 aaPredicted RBP13.53□□□□□ -0.24
NUP188-211ENST00000550219 PACSIN2Q9UNF0 486 aaPredicted RBP13.53□□□□□ -0.24
NUP188-211ENST00000550219 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.53□□□□□ -0.24
NUP188-211ENST00000550219 ITPR1Q14643 2758 aa13.53□□□□□ -0.24
NUP188-211ENST00000550219 TRPM6Q9BX84 2022 aa13.52□□□□□ -0.24
NUP188-211ENST00000550219 ESPNB1AK53 854 aa13.52□□□□□ -0.25
NUP188-211ENST00000550219 AREL1O15033 823 aa13.52□□□□□ -0.25
NUP188-211ENST00000550219 ZNF500O60304 480 aaPredicted RBP13.52□□□□□ -0.25
NUP188-211ENST00000550219 KDELR1P24390 212 aa13.52□□□□□ -0.25
NUP188-211ENST00000550219 IL4RP24394 825 aa13.52□□□□□ -0.25
NUP188-211ENST00000550219 HTR7P34969 479 aa13.52□□□□□ -0.25
NUP188-211ENST00000550219 HCAR3P49019 387 aa13.52□□□□□ -0.25
NUP188-211ENST00000550219 RWDD2BP57060 319 aa13.52□□□□□ -0.25
NUP188-211ENST00000550219 PTK2BQ14289 1009 aa13.52□□□□□ -0.25
NUP188-211ENST00000550219 PDK2Q15119 407 aa13.52□□□□□ -0.25
NUP188-211ENST00000550219 IRF4Q15306 451 aa13.52□□□□□ -0.25
NUP188-211ENST00000550219 PARP15Q460N3 678 aa13.52□□□□□ -0.25
NUP188-211ENST00000550219 PRRT3Q5FWE3 981 aa13.52□□□□□ -0.25
NUP188-211ENST00000550219 C3orf38Q5JPI3 329 aa13.52□□□□□ -0.25
NUP188-211ENST00000550219 CDCP2Q5VXM1 449 aa13.52□□□□□ -0.25
NUP188-211ENST00000550219 UBL4BQ8N7F7 174 aa13.52□□□□□ -0.25
NUP188-211ENST00000550219 PAF1Q8N7H5 531 aa13.52□□□□□ -0.25
NUP188-211ENST00000550219 FAM181AQ8N9Y4 354 aa13.52□□□□□ -0.25
NUP188-211ENST00000550219 EXD1Q8NHP7 514 aa13.52□□□□□ -0.25
NUP188-211ENST00000550219 BTN2A2Q8WVV5 523 aa13.52□□□□□ -0.25
NUP188-211ENST00000550219 CASKIN2Q8WXE0 1202 aa13.52□□□□□ -0.25
NUP188-211ENST00000550219 RAPGEF5Q92565 580 aa13.52□□□□□ -0.25
NUP188-211ENST00000550219 HSPH1Q92598 858 aa13.52□□□□□ -0.25
NUP188-211ENST00000550219 FGF11Q92914 225 aa13.52□□□□□ -0.25
NUP188-211ENST00000550219 VOPP1Q96AW1 172 aa13.52□□□□□ -0.25
NUP188-211ENST00000550219 KCTD15Q96SI1 283 aaPredicted RBP13.52□□□□□ -0.25
NUP188-211ENST00000550219 LRRC61Q9BV99 259 aa13.52□□□□□ -0.25
NUP188-211ENST00000550219 DHX35Q9H5Z1 703 aaKnown RBP13.52□□□□□ -0.25
NUP188-211ENST00000550219 USP29Q9HBJ7 922 aa13.52□□□□□ -0.25
NUP188-211ENST00000550219 PCDH18Q9HCL0 1135 aa13.52□□□□□ -0.25
NUP188-211ENST00000550219 MBNL1Q9NR56 388 aaKnown RBP13.52□□□□□ -0.25
NUP188-211ENST00000550219 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.52□□□□□ -0.25
NUP188-211ENST00000550219 SPASTQ9UBP0 616 aa13.52□□□□□ -0.25
NUP188-211ENST00000550219 RAI2Q9Y5P3 530 aa13.52□□□□□ -0.25
NUP188-211ENST00000550219 TDRD6O60522 2096 aaKnown RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms