RNA–Protein interactions for RNA: ENST00000549007.1

APAF1-208, Transcript of apoptotic peptidase activating factor 1, humanhuman

TSL 1 (best) BASIC

Gene APAF1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-208ENST00000549007 RPS6KA6Q9UK32 745 aa3.95□□□□□ -1.78
APAF1-208ENST00000549007 ADAMTS20P59510 1910 aa3.95□□□□□ -1.78
APAF1-208ENST00000549007 SCN10AQ9Y5Y9 1956 aa3.95□□□□□ -1.78
APAF1-208ENST00000549007 TBC1D3DA0A087WVF3 549 aa3.94□□□□□ -1.78
APAF1-208ENST00000549007 TBC1D3IA0A087WXS9 549 aa3.94□□□□□ -1.78
APAF1-208ENST00000549007 TBC1D3EA0A087X179 549 aa3.94□□□□□ -1.78
APAF1-208ENST00000549007 TBC1D3KA0A087X1G2 549 aa3.94□□□□□ -1.78
APAF1-208ENST00000549007 ARHGEF35A5YM69 484 aa3.94□□□□□ -1.78
APAF1-208ENST00000549007 TBC1D3BA6NDS4 549 aa3.94□□□□□ -1.78
APAF1-208ENST00000549007 TBC1D3FA6NER0 549 aaPredicted RBP3.94□□□□□ -1.78
APAF1-208ENST00000549007 VWC2LB2RUY7 222 aa3.94□□□□□ -1.78
APAF1-208ENST00000549007 TBC1D3LB9A6J9 549 aa3.94□□□□□ -1.78
APAF1-208ENST00000549007 FAM20BO75063 409 aa3.94□□□□□ -1.78
APAF1-208ENST00000549007 C22orf31O95567 290 aa3.94□□□□□ -1.78
APAF1-208ENST00000549007 TBC1D3HP0C7X1 549 aa3.94□□□□□ -1.78
APAF1-208ENST00000549007 PLA2G4BP0C869 781 aa3.94□□□□□ -1.78
APAF1-208ENST00000549007 TMEM225BP0DP42 221 aa3.94□□□□□ -1.78
APAF1-208ENST00000549007 STAT6P42226 847 aa3.94□□□□□ -1.78
APAF1-208ENST00000549007 RARRES1P49788 294 aa3.94□□□□□ -1.78
APAF1-208ENST00000549007 LRMPQ12912 555 aa3.94□□□□□ -1.78
APAF1-208ENST00000549007 PDIA5Q14554 519 aa3.94□□□□□ -1.78
APAF1-208ENST00000549007 AAK1Q2M2I8 961 aa3.94□□□□□ -1.78
APAF1-208ENST00000549007 AP5B1Q2VPB7 878 aa3.94□□□□□ -1.78
APAF1-208ENST00000549007 AASDHQ4L235 1098 aaPredicted RBP3.94□□□□□ -1.78
APAF1-208ENST00000549007 TMEM119Q4V9L6 283 aa3.94□□□□□ -1.78
APAF1-208ENST00000549007 XKR3Q5GH77 459 aa3.94□□□□□ -1.78
APAF1-208ENST00000549007 TBC1D3GQ6DHY5 549 aa3.94□□□□□ -1.78
APAF1-208ENST00000549007 TBC1D3CQ6IPX1 549 aa3.94□□□□□ -1.78
APAF1-208ENST00000549007 CLNKQ7Z7G1 428 aa3.94□□□□□ -1.78
APAF1-208ENST00000549007 MON1AQ86VX9 555 aa3.94□□□□□ -1.78
APAF1-208ENST00000549007 GPBP1Q86WP2 473 aa3.94□□□□□ -1.78
APAF1-208ENST00000549007 TBC1D3Q8IZP1 549 aaPredicted RBP3.94□□□□□ -1.78
APAF1-208ENST00000549007 LSM14AQ8ND56 463 aaKnown RBP3.94□□□□□ -1.78
APAF1-208ENST00000549007 ADAMTS15Q8TE58 950 aa3.94□□□□□ -1.78
APAF1-208ENST00000549007 AFAP1L1Q8TED9 768 aa3.94□□□□□ -1.78
APAF1-208ENST00000549007 CALML4Q96GE6 196 aa3.94□□□□□ -1.78
APAF1-208ENST00000549007 RADILQ96JH8 1075 aa3.94□□□□□ -1.78
APAF1-208ENST00000549007 TIGD1Q96MW7 591 aa3.94□□□□□ -1.78
APAF1-208ENST00000549007 POLR3CQ9BUI4 534 aaPredicted RBP3.94□□□□□ -1.78
APAF1-208ENST00000549007 GPR87Q9BY21 358 aa3.94□□□□□ -1.78
APAF1-208ENST00000549007 LMAN2LQ9H0V9 348 aa3.94□□□□□ -1.78
APAF1-208ENST00000549007 XPNPEP1Q9NQW7 623 aa3.94□□□□□ -1.78
APAF1-208ENST00000549007 FAM30AQ9NZY2 134 aa3.94□□□□□ -1.78
APAF1-208ENST00000549007 TBC1D7Q9P0N9 293 aa3.94□□□□□ -1.78
APAF1-208ENST00000549007 GDAQ9Y2T3 454 aa3.94□□□□□ -1.78
APAF1-208ENST00000549007 RANBP2P49792 3224 aaKnown RBP3.94□□□□□ -1.78
APAF1-208ENST00000549007 PRAMEF33A0A0G2JMD5 474 aa3.94□□□□□ -1.78
APAF1-208ENST00000549007 NPIPB15A6NHN6 443 aaPredicted RBP3.94□□□□□ -1.78
APAF1-208ENST00000549007 CAPN14A8MX76 684 aa3.94□□□□□ -1.78
APAF1-208ENST00000549007 NPIPB6E9PJ23 425 aa3.94□□□□□ -1.78
APAF1-208ENST00000549007 HBP1O60381 514 aa3.94□□□□□ -1.78
APAF1-208ENST00000549007 PRAMEF10O60809 474 aa3.94□□□□□ -1.78
APAF1-208ENST00000549007 EDN2P20800 178 aa3.94□□□□□ -1.78
APAF1-208ENST00000549007 GLDCP23378 1020 aa3.94□□□□□ -1.78
APAF1-208ENST00000549007 MGAT1P26572 445 aa3.94□□□□□ -1.78
APAF1-208ENST00000549007 THPOP40225 353 aa3.94□□□□□ -1.78
APAF1-208ENST00000549007 ANXA11P50995 505 aaKnown RBP3.94□□□□□ -1.78
APAF1-208ENST00000549007 POLGP54098 1239 aaPredicted RBP3.94□□□□□ -1.78
APAF1-208ENST00000549007 LINC00310P59036 64 aa3.94□□□□□ -1.78
APAF1-208ENST00000549007 EMC2Q15006 297 aa3.94□□□□□ -1.78
APAF1-208ENST00000549007 ACOX1Q15067 660 aa3.94□□□□□ -1.78
APAF1-208ENST00000549007 CAMK4Q16566 473 aa3.94□□□□□ -1.78
APAF1-208ENST00000549007 CCDC144NLQ6NUI1 221 aa3.94□□□□□ -1.78
APAF1-208ENST00000549007 MTHFD1LQ6UB35 978 aa3.94□□□□□ -1.78
APAF1-208ENST00000549007 LIMS2Q7Z4I7 341 aa3.94□□□□□ -1.78
APAF1-208ENST00000549007 C4orf19Q8IY42 314 aa3.94□□□□□ -1.78
APAF1-208ENST00000549007 ZNF808Q8N4W9 903 aaPredicted RBP3.94□□□□□ -1.78
APAF1-208ENST00000549007 PLD5Q8N7P1 536 aa3.94□□□□□ -1.78
APAF1-208ENST00000549007 RDM1Q8NG50 284 aa3.94□□□□□ -1.78
APAF1-208ENST00000549007 NCSTNQ92542 709 aa3.94□□□□□ -1.78
APAF1-208ENST00000549007 MRPS27Q92552 414 aaKnown RBP3.94□□□□□ -1.78
APAF1-208ENST00000549007 RAD54LQ92698 747 aa3.94□□□□□ -1.78
APAF1-208ENST00000549007 NLRP4Q96MN2 994 aa3.94□□□□□ -1.78
APAF1-208ENST00000549007 ZMAT2Q96NC0 199 aaKnown RBP3.94□□□□□ -1.78
APAF1-208ENST00000549007 TUFT1Q9NNX1 390 aa3.94□□□□□ -1.78
APAF1-208ENST00000549007 NRBP2Q9NSY0 501 aa3.94□□□□□ -1.78
APAF1-208ENST00000549007 NFKBIL1Q9UBC1 381 aaPredicted RBP3.94□□□□□ -1.78
APAF1-208ENST00000549007 MYH9P35579 1960 aaKnown RBP3.94□□□□□ -1.78
APAF1-208ENST00000549007 A1L4Q6 167 aa3.94□□□□□ -1.78
APAF1-208ENST00000549007 TCAF2A6NFQ2 919 aa3.94□□□□□ -1.78
APAF1-208ENST00000549007 MYMKA6NI61 221 aa3.94□□□□□ -1.78
APAF1-208ENST00000549007 PTGES3LE9PB15 166 aa3.94□□□□□ -1.78
APAF1-208ENST00000549007 CABYRO75952 493 aa3.94□□□□□ -1.78
APAF1-208ENST00000549007 KAT7O95251 611 aa3.94□□□□□ -1.78
APAF1-208ENST00000549007 RARGP13631 454 aa3.94□□□□□ -1.78
APAF1-208ENST00000549007 PBX3P40426 434 aa3.94□□□□□ -1.78
APAF1-208ENST00000549007 CDK7P50613 346 aa3.94□□□□□ -1.78
APAF1-208ENST00000549007 TAS2R50P59544 299 aa3.94□□□□□ -1.78
APAF1-208ENST00000549007 CXADRP78310 365 aa3.94□□□□□ -1.78
APAF1-208ENST00000549007 RAE1P78406 368 aaKnown RBP3.94□□□□□ -1.78
APAF1-208ENST00000549007 TIAL1Q01085 375 aaKnown RBP eCLIP3.94□□□□□ -1.78
APAF1-208ENST00000549007 MC1RQ01726 317 aa3.94□□□□□ -1.78
APAF1-208ENST00000549007 SEMA3BQ13214 749 aa3.94□□□□□ -1.78
APAF1-208ENST00000549007 NAA25Q14CX7 972 aa3.94□□□□□ -1.78
APAF1-208ENST00000549007 ZNF667Q5HYK9 610 aa3.94□□□□□ -1.78
APAF1-208ENST00000549007 ATL3Q6DD88 541 aa3.94□□□□□ -1.78
APAF1-208ENST00000549007 ADALQ6DHV7 355 aa3.94□□□□□ -1.78
APAF1-208ENST00000549007 ISM2Q6H9L7 571 aa3.94□□□□□ -1.78
APAF1-208ENST00000549007 LRRC55Q6ZSA7 311 aa3.94□□□□□ -1.78
APAF1-208ENST00000549007 DEFB128Q7Z7B8 93 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 242.6 ms