RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 HAUS1Q96CS2 278 aa18.83■□□□□ 0.6
PRPF40B-206ENST00000547764 CAMK1GQ96NX5 476 aa18.83■□□□□ 0.6
PRPF40B-206ENST00000547764 HERPUD2Q9BSE4 406 aa18.83■□□□□ 0.6
PRPF40B-206ENST00000547764 CEP41Q9BYV8 373 aa18.83■□□□□ 0.6
PRPF40B-206ENST00000547764 TSGA10Q9BZW7 698 aa18.83■□□□□ 0.6
PRPF40B-206ENST00000547764 SLC32A1Q9H598 525 aa18.83■□□□□ 0.6
PRPF40B-206ENST00000547764 SEPT10Q9P0V9 454 aa18.83■□□□□ 0.6
PRPF40B-206ENST00000547764 PHTF1Q9UMS5 762 aa18.83■□□□□ 0.6
PRPF40B-206ENST00000547764 PACSIN2Q9UNF0 486 aaPredicted RBP18.83■□□□□ 0.6
PRPF40B-206ENST00000547764 PCNX2A6NKB5 2137 aa18.83■□□□□ 0.6
PRPF40B-206ENST00000547764 CFAP69A5D8W1 941 aa18.82■□□□□ 0.6
PRPF40B-206ENST00000547764 A8MX80 341 aa18.82■□□□□ 0.6
PRPF40B-206ENST00000547764 PCDHGA12O60330 932 aa18.82■□□□□ 0.6
PRPF40B-206ENST00000547764 FZD6O60353 706 aa18.82■□□□□ 0.6
PRPF40B-206ENST00000547764 PDHA1P08559 390 aa18.82■□□□□ 0.6
PRPF40B-206ENST00000547764 PYGMP11217 842 aa18.82■□□□□ 0.6
PRPF40B-206ENST00000547764 CCZ1BP86790 482 aa18.82■□□□□ 0.6
PRPF40B-206ENST00000547764 CCZ1P86791 482 aaPredicted RBP18.82■□□□□ 0.6
PRPF40B-206ENST00000547764 SUZ12Q15022 739 aaKnown RBP18.82■□□□□ 0.6
PRPF40B-206ENST00000547764 AADACL2Q6P093 401 aa18.82■□□□□ 0.6
PRPF40B-206ENST00000547764 LIPIQ6XZB0 460 aa18.82■□□□□ 0.6
PRPF40B-206ENST00000547764 KDM7AQ6ZMT4 941 aa18.82■□□□□ 0.6
PRPF40B-206ENST00000547764 ZC3H18Q86VM9 953 aaKnown RBP18.82■□□□□ 0.6
PRPF40B-206ENST00000547764 NAXDQ8IW45 347 aa18.82■□□□□ 0.6
PRPF40B-206ENST00000547764 SLC22A18ASQ8N1D0 253 aa18.82■□□□□ 0.6
PRPF40B-206ENST00000547764 TP53I13Q8NBR0 393 aaPredicted RBP18.82■□□□□ 0.6
PRPF40B-206ENST00000547764 TFB1MQ8WVM0 346 aaKnown RBP18.82■□□□□ 0.6
PRPF40B-206ENST00000547764 PIH1D2Q8WWB5 315 aa18.82■□□□□ 0.6
PRPF40B-206ENST00000547764 C1QTNF7Q9BXJ2 289 aa18.82■□□□□ 0.6
PRPF40B-206ENST00000547764 OSBPL8Q9BZF1 889 aa18.82■□□□□ 0.6
PRPF40B-206ENST00000547764 MBNL1Q9NR56 388 aaKnown RBP18.82■□□□□ 0.6
PRPF40B-206ENST00000547764 GPR27Q9NS67 375 aa18.82■□□□□ 0.6
PRPF40B-206ENST00000547764 B4GALT6Q9UBX8 382 aa18.82■□□□□ 0.6
PRPF40B-206ENST00000547764 GUCA1BQ9UMX6 200 aa18.82■□□□□ 0.6
PRPF40B-206ENST00000547764 EFR3BQ9Y2G0 817 aa18.82■□□□□ 0.6
PRPF40B-206ENST00000547764 LRRK1Q38SD2 2015 aa18.81■□□□□ 0.6
PRPF40B-206ENST00000547764 MIF4GDA9UHW6 222 aaKnown RBP18.81■□□□□ 0.6
PRPF40B-206ENST00000547764 KRT86O43790 486 aa18.81■□□□□ 0.6
PRPF40B-206ENST00000547764 LZTS3O60299 673 aaPredicted RBP18.81■□□□□ 0.6
PRPF40B-206ENST00000547764 MMP2P08253 660 aa18.81■□□□□ 0.6
PRPF40B-206ENST00000547764 ELFN1P0C7U0 828 aa18.81■□□□□ 0.6
PRPF40B-206ENST00000547764 PTPN7P35236 360 aa18.81■□□□□ 0.6
PRPF40B-206ENST00000547764 IGFALSP35858 605 aa18.81■□□□□ 0.6
PRPF40B-206ENST00000547764 RABIFP47224 123 aa18.81■□□□□ 0.6
PRPF40B-206ENST00000547764 RXRGP48443 463 aa18.81■□□□□ 0.6
PRPF40B-206ENST00000547764 ARRB1P49407 418 aaPredicted RBP18.81■□□□□ 0.6
PRPF40B-206ENST00000547764 PFN3P60673 137 aa18.81■□□□□ 0.6
PRPF40B-206ENST00000547764 DCP2Q8IU60 420 aaKnown RBP18.81■□□□□ 0.6
PRPF40B-206ENST00000547764 OXR1Q8N573 874 aa18.81■□□□□ 0.6
PRPF40B-206ENST00000547764 UBL4BQ8N7F7 174 aa18.81■□□□□ 0.6
PRPF40B-206ENST00000547764 SETD7Q8WTS6 366 aaKnown RBP18.81■□□□□ 0.6
PRPF40B-206ENST00000547764 AGAP3Q96P47 875 aa18.81■□□□□ 0.6
PRPF40B-206ENST00000547764 TDRD1Q9BXT4 1180 aaKnown RBP18.81■□□□□ 0.6
PRPF40B-206ENST00000547764 CHKBQ9Y259 395 aa18.81■□□□□ 0.6
PRPF40B-206ENST00000547764 PPIL1Q9Y3C6 166 aa18.81■□□□□ 0.6
PRPF40B-206ENST00000547764 MED19A0JLT2 244 aaPredicted RBP18.8■□□□□ 0.6
PRPF40B-206ENST00000547764 APOC4-APOC2K7ER74 178 aa18.8■□□□□ 0.6
PRPF40B-206ENST00000547764 DDX3YO15523 660 aaKnown RBP18.8■□□□□ 0.6
PRPF40B-206ENST00000547764 FLRT2O43155 660 aa18.8■□□□□ 0.6
PRPF40B-206ENST00000547764 APOC2P02655 101 aa18.8■□□□□ 0.6
PRPF40B-206ENST00000547764 CCDC175P0C221 793 aa18.8■□□□□ 0.6
PRPF40B-206ENST00000547764 NFKBIAP25963 317 aa18.8■□□□□ 0.6
PRPF40B-206ENST00000547764 CD86P42081 329 aa18.8■□□□□ 0.6
PRPF40B-206ENST00000547764 LRRC14Q15048 493 aa18.8■□□□□ 0.6
PRPF40B-206ENST00000547764 AGERQ15109 404 aa18.8■□□□□ 0.6
PRPF40B-206ENST00000547764 PTPRRQ15256 657 aa18.8■□□□□ 0.6
PRPF40B-206ENST00000547764 IRF4Q15306 451 aa18.8■□□□□ 0.6
PRPF40B-206ENST00000547764 WSCD2Q2TBF2 565 aa18.8■□□□□ 0.6
PRPF40B-206ENST00000547764 TEX44Q53QW1 395 aa18.8■□□□□ 0.6
PRPF40B-206ENST00000547764 CCDC181Q5TID7 509 aa18.8■□□□□ 0.6
PRPF40B-206ENST00000547764 GATAD2AQ86YP4 633 aa18.8■□□□□ 0.6
PRPF40B-206ENST00000547764 SAP25Q8TEE9 199 aa18.8■□□□□ 0.6
PRPF40B-206ENST00000547764 SCRN2Q96FV2 425 aa18.8■□□□□ 0.6
PRPF40B-206ENST00000547764 MCCC1Q96RQ3 725 aaPredicted RBP18.8■□□□□ 0.6
PRPF40B-206ENST00000547764 PCOLCE2Q9UKZ9 415 aa18.8■□□□□ 0.6
PRPF40B-206ENST00000547764 BTBD3Q9Y2F9 522 aa18.8■□□□□ 0.6
PRPF40B-206ENST00000547764 NPIPB15A6NHN6 443 aaPredicted RBP18.79■□□□□ 0.6
PRPF40B-206ENST00000547764 YKT6O15498 198 aa18.79■□□□□ 0.6
PRPF40B-206ENST00000547764 CBFA2T3O75081 653 aa18.79■□□□□ 0.6
PRPF40B-206ENST00000547764 RECQL5O94762 991 aaPredicted RBP18.79■□□□□ 0.6
PRPF40B-206ENST00000547764 PRLP01236 227 aa18.79■□□□□ 0.6
PRPF40B-206ENST00000547764 CYP2A6P11509 494 aaPredicted RBP18.79■□□□□ 0.6
PRPF40B-206ENST00000547764 CTPS1P17812 591 aa18.79■□□□□ 0.6
PRPF40B-206ENST00000547764 GM2AP17900 193 aa18.79■□□□□ 0.6
PRPF40B-206ENST00000547764 PTPN3P26045 913 aa18.79■□□□□ 0.6
PRPF40B-206ENST00000547764 EPHA8P29322 1005 aaPredicted RBP18.79■□□□□ 0.6
PRPF40B-206ENST00000547764 VIPR1P32241 457 aa18.79■□□□□ 0.6
PRPF40B-206ENST00000547764 CETN2P41208 172 aa18.79■□□□□ 0.6
PRPF40B-206ENST00000547764 SKOR1P84550 965 aa18.79■□□□□ 0.6
PRPF40B-206ENST00000547764 BNIP3Q12983 259 aa18.79■□□□□ 0.6
PRPF40B-206ENST00000547764 ZNF211Q13398 564 aaPredicted RBP18.79■□□□□ 0.6
PRPF40B-206ENST00000547764 PDE1CQ14123 709 aaPredicted RBP18.79■□□□□ 0.6
PRPF40B-206ENST00000547764 CNGA3Q16281 694 aa18.79■□□□□ 0.6
PRPF40B-206ENST00000547764 TPRG1LQ5T0D9 272 aa18.79■□□□□ 0.6
PRPF40B-206ENST00000547764 N4BP2L1Q5TBK1 243 aaPredicted RBP18.79■□□□□ 0.6
PRPF40B-206ENST00000547764 USP45Q70EL2 814 aa18.79■□□□□ 0.6
PRPF40B-206ENST00000547764 RHBDD1Q8TEB9 315 aa18.79■□□□□ 0.6
PRPF40B-206ENST00000547764 HES6Q96HZ4 224 aa18.79■□□□□ 0.6
PRPF40B-206ENST00000547764 QKIQ96PU8 341 aaKnown RBP eCLIP18.79■□□□□ 0.6
PRPF40B-206ENST00000547764 SMIM14Q96QK8 99 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms