RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 KATNAL2Q8IYT4 538 aa15.97■□□□□ 0.15
DDX54-204ENST00000546898 EID2Q8N6I1 236 aa15.97■□□□□ 0.15
DDX54-204ENST00000546898 RNF25Q96BH1 459 aaPredicted RBP15.97■□□□□ 0.15
DDX54-204ENST00000546898 CNDP2Q96KP4 475 aaKnown RBP15.97■□□□□ 0.15
DDX54-204ENST00000546898 OLFM3Q96PB7 478 aa15.97■□□□□ 0.15
DDX54-204ENST00000546898 BAG1Q99933 345 aaPredicted RBP15.97■□□□□ 0.15
DDX54-204ENST00000546898 SCNM1Q9BWG6 230 aa15.97■□□□□ 0.15
DDX54-204ENST00000546898 BRD8Q9H0E9 1235 aa15.97■□□□□ 0.15
DDX54-204ENST00000546898 MBNL1Q9NR56 388 aaKnown RBP15.97■□□□□ 0.15
DDX54-204ENST00000546898 DNAJC28Q9NX36 388 aa15.97■□□□□ 0.15
DDX54-204ENST00000546898 KCTD5Q9NXV2 234 aa15.97■□□□□ 0.15
DDX54-204ENST00000546898 B4GALT6Q9UBX8 382 aa15.97■□□□□ 0.15
DDX54-204ENST00000546898 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.97■□□□□ 0.15
DDX54-204ENST00000546898 HEY1Q9Y5J3 304 aa15.97■□□□□ 0.15
DDX54-204ENST00000546898 MAP1BP46821 2468 aaKnown RBP15.96■□□□□ 0.15
DDX54-204ENST00000546898 ENC1O14682 589 aa15.96■□□□□ 0.15
DDX54-204ENST00000546898 PJA2O43164 708 aa15.96■□□□□ 0.15
DDX54-204ENST00000546898 HYAL3O43820 417 aaPredicted RBP15.96■□□□□ 0.15
DDX54-204ENST00000546898 FZD6O60353 706 aa15.96■□□□□ 0.15
DDX54-204ENST00000546898 HLA-DQB2P05538 268 aa15.96■□□□□ 0.15
DDX54-204ENST00000546898 ATXN1LP0C7T5 689 aaKnown RBP15.96■□□□□ 0.15
DDX54-204ENST00000546898 ALPPL2P10696 532 aa15.96■□□□□ 0.15
DDX54-204ENST00000546898 KRT10P13645 584 aa15.96■□□□□ 0.15
DDX54-204ENST00000546898 VIPR1P32241 457 aa15.96■□□□□ 0.15
DDX54-204ENST00000546898 CDKN2BP42772 138 aa15.96■□□□□ 0.15
DDX54-204ENST00000546898 PEX5P50542 639 aa15.96■□□□□ 0.15
DDX54-204ENST00000546898 VAV2P52735 878 aa15.96■□□□□ 0.15
DDX54-204ENST00000546898 IFI35P80217 286 aaPredicted RBP15.96■□□□□ 0.15
DDX54-204ENST00000546898 MTM1Q13496 603 aa15.96■□□□□ 0.15
DDX54-204ENST00000546898 WSCD2Q2TBF2 565 aa15.96■□□□□ 0.15
DDX54-204ENST00000546898 HS1BP3Q53T59 392 aa15.96■□□□□ 0.15
DDX54-204ENST00000546898 DAAM2Q86T65 1068 aa15.96■□□□□ 0.15
DDX54-204ENST00000546898 SLCO6A1Q86UG4 719 aa15.96■□□□□ 0.15
DDX54-204ENST00000546898 TMEM139Q8IV31 216 aa15.96■□□□□ 0.15
DDX54-204ENST00000546898 NDUFAF2Q8N183 169 aa15.96■□□□□ 0.15
DDX54-204ENST00000546898 TXLNBQ8N3L3 684 aa15.96■□□□□ 0.15
DDX54-204ENST00000546898 TPCN2Q8NHX9 752 aa15.96■□□□□ 0.15
DDX54-204ENST00000546898 BTN2A2Q8WVV5 523 aa15.96■□□□□ 0.15
DDX54-204ENST00000546898 RBM41Q96IZ5 413 aaKnown RBP15.96■□□□□ 0.15
DDX54-204ENST00000546898 MCCC1Q96RQ3 725 aaPredicted RBP15.96■□□□□ 0.15
DDX54-204ENST00000546898 IL12RB2Q99665 862 aa15.96■□□□□ 0.15
DDX54-204ENST00000546898 GOLPH3Q9H4A6 298 aa15.96■□□□□ 0.15
DDX54-204ENST00000546898 TFR2Q9UP52 801 aa15.96■□□□□ 0.15
DDX54-204ENST00000546898 PPIL1Q9Y3C6 166 aa15.96■□□□□ 0.15
DDX54-204ENST00000546898 TTLL3Q9Y4R7 772 aa15.96■□□□□ 0.15
DDX54-204ENST00000546898 PCDHGA1Q9Y5H4 931 aa15.96■□□□□ 0.15
DDX54-204ENST00000546898 RAI2Q9Y5P3 530 aa15.96■□□□□ 0.15
DDX54-204ENST00000546898 FAM221BA6H8Z2 402 aa15.95■□□□□ 0.14
DDX54-204ENST00000546898 NEMP2A6NFY4 417 aa15.95■□□□□ 0.14
DDX54-204ENST00000546898 PSMD11O00231 422 aa15.95■□□□□ 0.14
DDX54-204ENST00000546898 RECQL5O94762 991 aaPredicted RBP15.95■□□□□ 0.14
DDX54-204ENST00000546898 CDK4P11802 303 aa15.95■□□□□ 0.14
DDX54-204ENST00000546898 TGM2P21980 687 aa15.95■□□□□ 0.14
DDX54-204ENST00000546898 NR2C2P49116 596 aa15.95■□□□□ 0.14
DDX54-204ENST00000546898 SEMG2Q02383 582 aa15.95■□□□□ 0.14
DDX54-204ENST00000546898 TFDP3Q5H9I0 405 aa15.95■□□□□ 0.14
DDX54-204ENST00000546898 TPRG1LQ5T0D9 272 aa15.95■□□□□ 0.14
DDX54-204ENST00000546898 SPOCD1Q6ZMY3 1216 aa15.95■□□□□ 0.14
DDX54-204ENST00000546898 USP45Q70EL2 814 aa15.95■□□□□ 0.14
DDX54-204ENST00000546898 SLC25A45Q8N413 288 aa15.95■□□□□ 0.14
DDX54-204ENST00000546898 CHCHD4Q8N4Q1 142 aa15.95■□□□□ 0.14
DDX54-204ENST00000546898 OR4C6Q8NH72 309 aa15.95■□□□□ 0.14
DDX54-204ENST00000546898 EXD1Q8NHP7 514 aa15.95■□□□□ 0.14
DDX54-204ENST00000546898 SCRN2Q96FV2 425 aa15.95■□□□□ 0.14
DDX54-204ENST00000546898 TBATAQ96M53 351 aa15.95■□□□□ 0.14
DDX54-204ENST00000546898 LGMNQ99538 433 aa15.95■□□□□ 0.14
DDX54-204ENST00000546898 TDRD1Q9BXT4 1180 aaKnown RBP15.95■□□□□ 0.14
DDX54-204ENST00000546898 DNPEPQ9ULA0 475 aa15.95■□□□□ 0.14
DDX54-204ENST00000546898 REXO2Q9Y3B8 237 aaKnown RBP15.95■□□□□ 0.14
DDX54-204ENST00000546898 PLXNB3Q9ULL4 1909 aa15.94■□□□□ 0.14
DDX54-204ENST00000546898 RCCD1A6NED2 376 aa15.94■□□□□ 0.14
DDX54-204ENST00000546898 KCNK1O00180 336 aa15.94■□□□□ 0.14
DDX54-204ENST00000546898 HEXIM1O94992 359 aaKnown RBP15.94■□□□□ 0.14
DDX54-204ENST00000546898 ZRANB2O95218 330 aaKnown RBP eCLIP15.94■□□□□ 0.14
DDX54-204ENST00000546898 TOP3BO95985 862 aaKnown RBP15.94■□□□□ 0.14
DDX54-204ENST00000546898 C1SP09871 688 aa15.94■□□□□ 0.14
DDX54-204ENST00000546898 HTR1BP28222 390 aa15.94■□□□□ 0.14
DDX54-204ENST00000546898 DYNLT1P63172 113 aa15.94■□□□□ 0.14
DDX54-204ENST00000546898 DSC2Q02487 901 aa15.94■□□□□ 0.14
DDX54-204ENST00000546898 AP1B1Q10567 949 aa15.94■□□□□ 0.14
DDX54-204ENST00000546898 EIF2B5Q13144 721 aaKnown RBP15.94■□□□□ 0.14
DDX54-204ENST00000546898 ZNF211Q13398 564 aaPredicted RBP15.94■□□□□ 0.14
DDX54-204ENST00000546898 CNGA3Q16281 694 aa15.94■□□□□ 0.14
DDX54-204ENST00000546898 PROX2Q3B8N5 592 aa15.94■□□□□ 0.14
DDX54-204ENST00000546898 ESRP1Q6NXG1 681 aaKnown RBP15.94■□□□□ 0.14
DDX54-204ENST00000546898 NPNTQ6UXI9 565 aa15.94■□□□□ 0.14
DDX54-204ENST00000546898 KDM7AQ6ZMT4 941 aa15.94■□□□□ 0.14
DDX54-204ENST00000546898 RCOR2Q8IZ40 523 aa15.94■□□□□ 0.14
DDX54-204ENST00000546898 PNPLA1Q8N8W4 532 aa15.94■□□□□ 0.14
DDX54-204ENST00000546898 ACRBPQ8NEB7 543 aa15.94■□□□□ 0.14
DDX54-204ENST00000546898 ZNF548Q8NEK5 533 aaPredicted RBP15.94■□□□□ 0.14
DDX54-204ENST00000546898 ATL2Q8NHH9 583 aa15.94■□□□□ 0.14
DDX54-204ENST00000546898 ARRDC2Q8TBH0 407 aa15.94■□□□□ 0.14
DDX54-204ENST00000546898 PIH1D2Q8WWB5 315 aa15.94■□□□□ 0.14
DDX54-204ENST00000546898 COQ10AQ96MF6 247 aa15.94■□□□□ 0.14
DDX54-204ENST00000546898 DUSP23Q9BVJ7 150 aa15.94■□□□□ 0.14
DDX54-204ENST00000546898 UCKL1Q9NWZ5 548 aa15.94■□□□□ 0.14
DDX54-204ENST00000546898 NLGN3Q9NZ94 848 aa15.94■□□□□ 0.14
DDX54-204ENST00000546898 SALL4Q9UJQ4 1053 aa15.94■□□□□ 0.14
DDX54-204ENST00000546898 MSRB2Q9Y3D2 182 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms