RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 MED28Q9H204 178 aa12.85□□□□□ -0.35
PTCH1-212ENST00000546744 MAN1C1Q9NR34 630 aa12.85□□□□□ -0.35
PTCH1-212ENST00000546744 TRPM5Q9NZQ8 1165 aa12.85□□□□□ -0.35
PTCH1-212ENST00000546744 PHF24Q9UPV7 400 aa12.85□□□□□ -0.35
PTCH1-212ENST00000546744 CASZ1Q86V15 1759 aa12.84□□□□□ -0.35
PTCH1-212ENST00000546744 E7ENX8 843 aa12.84□□□□□ -0.35
PTCH1-212ENST00000546744 H0YGN5 161 aa12.84□□□□□ -0.35
PTCH1-212ENST00000546744 CHST10O43529 356 aa12.84□□□□□ -0.35
PTCH1-212ENST00000546744 RPLP0P05388 317 aaKnown RBP12.84□□□□□ -0.35
PTCH1-212ENST00000546744 GPR15P49685 360 aa12.84□□□□□ -0.35
PTCH1-212ENST00000546744 TMBIM6P55061 237 aa12.84□□□□□ -0.35
PTCH1-212ENST00000546744 ACSM2AQ08AH3 577 aa12.84□□□□□ -0.35
PTCH1-212ENST00000546744 DLG1Q12959 904 aa12.84□□□□□ -0.35
PTCH1-212ENST00000546744 ACSM2BQ68CK6 577 aa12.84□□□□□ -0.35
PTCH1-212ENST00000546744 CDCA2Q69YH5 1023 aaPredicted RBP12.84□□□□□ -0.35
PTCH1-212ENST00000546744 DNAJB7Q7Z6W7 309 aaPredicted RBP12.84□□□□□ -0.35
PTCH1-212ENST00000546744 CAMKK1Q8N5S9 505 aa12.84□□□□□ -0.35
PTCH1-212ENST00000546744 CDYL2Q8N8U2 506 aa12.84□□□□□ -0.35
PTCH1-212ENST00000546744 B3GALNT2Q8NCR0 500 aa12.84□□□□□ -0.35
PTCH1-212ENST00000546744 OR8H1Q8NGG4 311 aa12.84□□□□□ -0.35
PTCH1-212ENST00000546744 CPT1BQ92523 772 aa12.84□□□□□ -0.35
PTCH1-212ENST00000546744 PHF12Q96QT6 1004 aa12.84□□□□□ -0.35
PTCH1-212ENST00000546744 PIF1Q9H611 641 aa12.84□□□□□ -0.35
PTCH1-212ENST00000546744 MIEF1Q9NQG6 463 aa12.84□□□□□ -0.35
PTCH1-212ENST00000546744 SALL4Q9UJQ4 1053 aa12.84□□□□□ -0.35
PTCH1-212ENST00000546744 ANGPT4Q9Y264 503 aa12.84□□□□□ -0.35
PTCH1-212ENST00000546744 NFS1Q9Y697 457 aa12.84□□□□□ -0.35
PTCH1-212ENST00000546744 NUP98P52948 1817 aa12.84□□□□□ -0.35
PTCH1-212ENST00000546744 BTBD19C9JJ37 291 aa12.84□□□□□ -0.35
PTCH1-212ENST00000546744 KPNA3O00505 521 aaPredicted RBP12.84□□□□□ -0.35
PTCH1-212ENST00000546744 PGRMC2O15173 223 aa12.84□□□□□ -0.35
PTCH1-212ENST00000546744 IGFBP5P24593 272 aa12.84□□□□□ -0.35
PTCH1-212ENST00000546744 AP3S2P59780 193 aa12.84□□□□□ -0.35
PTCH1-212ENST00000546744 C15orf59Q2T9L4 293 aaPredicted RBP12.84□□□□□ -0.35
PTCH1-212ENST00000546744 IL27RAQ6UWB1 636 aa12.84□□□□□ -0.35
PTCH1-212ENST00000546744 PTAR1Q7Z6K3 402 aaPredicted RBP12.84□□□□□ -0.35
PTCH1-212ENST00000546744 CCDC28AQ8IWP9 274 aa12.84□□□□□ -0.35
PTCH1-212ENST00000546744 MKL1Q969V6 931 aa12.84□□□□□ -0.35
PTCH1-212ENST00000546744 SLC47A1Q96FL8 570 aa12.84□□□□□ -0.35
PTCH1-212ENST00000546744 QRFPRQ96P65 431 aa12.84□□□□□ -0.35
PTCH1-212ENST00000546744 MMP19Q99542 508 aa12.84□□□□□ -0.35
PTCH1-212ENST00000546744 MECRQ9BV79 373 aa12.84□□□□□ -0.35
PTCH1-212ENST00000546744 FAM126AQ9BYI3 521 aaPredicted RBP12.84□□□□□ -0.35
PTCH1-212ENST00000546744 RERGLQ9H628 205 aa12.84□□□□□ -0.35
PTCH1-212ENST00000546744 C12orf4Q9NQ89 552 aa12.84□□□□□ -0.35
PTCH1-212ENST00000546744 SETD4Q9NVD3 440 aa12.84□□□□□ -0.35
PTCH1-212ENST00000546744 EML1O00423 815 aa12.84□□□□□ -0.35
PTCH1-212ENST00000546744 ZW10O43264 779 aa12.84□□□□□ -0.35
PTCH1-212ENST00000546744 ITM2AO43736 263 aa12.84□□□□□ -0.35
PTCH1-212ENST00000546744 MTRF1O75570 445 aaKnown RBP12.84□□□□□ -0.35
PTCH1-212ENST00000546744 FGRP09769 529 aa12.84□□□□□ -0.35
PTCH1-212ENST00000546744 ACO1P21399 889 aaKnown RBP12.84□□□□□ -0.35
PTCH1-212ENST00000546744 LIMK2P53671 638 aa12.84□□□□□ -0.35
PTCH1-212ENST00000546744 TGM3Q08188 693 aa12.84□□□□□ -0.35
PTCH1-212ENST00000546744 IQSEC1Q6DN90 963 aa12.84□□□□□ -0.35
PTCH1-212ENST00000546744 GLYATQ6IB77 296 aa12.84□□□□□ -0.35
PTCH1-212ENST00000546744 RASSF6Q6ZTQ3 369 aa12.84□□□□□ -0.35
PTCH1-212ENST00000546744 GPRIN3Q6ZVF9 776 aa12.84□□□□□ -0.35
PTCH1-212ENST00000546744 FAM84AQ96KN4 292 aa12.84□□□□□ -0.35
PTCH1-212ENST00000546744 CDK5RAP1Q96SZ6 601 aaKnown RBP12.84□□□□□ -0.35
PTCH1-212ENST00000546744 FAIMQ9NVQ4 179 aa12.84□□□□□ -0.35
PTCH1-212ENST00000546744 TSR3Q9UJK0 312 aaKnown RBP12.84□□□□□ -0.35
PTCH1-212ENST00000546744 FBXO5Q9UKT4 447 aa12.84□□□□□ -0.35
PTCH1-212ENST00000546744 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.83□□□□□ -0.35
PTCH1-212ENST00000546744 SYNDIG1LA6NDD5 238 aa12.83□□□□□ -0.35
PTCH1-212ENST00000546744 ZNF701M0R085 212 aaPredicted RBP12.83□□□□□ -0.35
PTCH1-212ENST00000546744 BMP10O95393 424 aa12.83□□□□□ -0.35
PTCH1-212ENST00000546744 ZNF177Q13360 481 aaPredicted RBP12.83□□□□□ -0.35
PTCH1-212ENST00000546744 ISLR2Q6UXK2 745 aa12.83□□□□□ -0.35
PTCH1-212ENST00000546744 MUC3BQ9H195 1237 aa12.83□□□□□ -0.35
PTCH1-212ENST00000546744 CCDC177Q9NQR7 707 aaPredicted RBP12.83□□□□□ -0.35
PTCH1-212ENST00000546744 IL17RBQ9NRM6 502 aa12.83□□□□□ -0.35
PTCH1-212ENST00000546744 ZNF224Q9NZL3 707 aa12.83□□□□□ -0.35
PTCH1-212ENST00000546744 NKX1-2Q9UD57 310 aaPredicted RBP12.83□□□□□ -0.35
PTCH1-212ENST00000546744 POLLQ9UGP5 575 aa12.83□□□□□ -0.35
PTCH1-212ENST00000546744 SPACA6W5XKT8 324 aa12.83□□□□□ -0.35
PTCH1-212ENST00000546744 TCHHQ07283 1943 aa12.83□□□□□ -0.35
PTCH1-212ENST00000546744 N4BP2Q86UW6 1770 aaPredicted RBP12.83□□□□□ -0.36
PTCH1-212ENST00000546744 FAM172BPA6NC97 362 aa12.83□□□□□ -0.36
PTCH1-212ENST00000546744 DHX15O43143 795 aaKnown RBP12.83□□□□□ -0.36
PTCH1-212ENST00000546744 RAD17O75943 681 aa12.83□□□□□ -0.36
PTCH1-212ENST00000546744 TGFB3P10600 412 aa12.83□□□□□ -0.36
PTCH1-212ENST00000546744 ERCC2P18074 760 aa12.83□□□□□ -0.36
PTCH1-212ENST00000546744 ERP29P30040 261 aaKnown RBP12.83□□□□□ -0.36
PTCH1-212ENST00000546744 FOXM1Q08050 763 aa12.83□□□□□ -0.36
PTCH1-212ENST00000546744 ARHGEF6Q15052 776 aa12.83□□□□□ -0.36
PTCH1-212ENST00000546744 SLC9A4Q6AI14 798 aa12.83□□□□□ -0.36
PTCH1-212ENST00000546744 TLDC1Q6P9B6 456 aa12.83□□□□□ -0.36
PTCH1-212ENST00000546744 CUZD1Q86UP6 607 aa12.83□□□□□ -0.36
PTCH1-212ENST00000546744 MOSPD2Q8NHP6 518 aa12.83□□□□□ -0.36
PTCH1-212ENST00000546744 NELL1Q92832 810 aa12.83□□□□□ -0.36
PTCH1-212ENST00000546744 TPD52L3Q96J77 140 aa12.83□□□□□ -0.36
PTCH1-212ENST00000546744 RPRD1AQ96P16 312 aaPredicted RBP12.83□□□□□ -0.36
PTCH1-212ENST00000546744 MNTQ99583 582 aa12.83□□□□□ -0.36
PTCH1-212ENST00000546744 ST6GALNAC4Q9H4F1 302 aa12.83□□□□□ -0.36
PTCH1-212ENST00000546744 ZNF696Q9H7X3 374 aa12.83□□□□□ -0.36
PTCH1-212ENST00000546744 COQ10BQ9H8M1 238 aa12.83□□□□□ -0.36
PTCH1-212ENST00000546744 GMIPQ9P107 970 aa12.83□□□□□ -0.36
PTCH1-212ENST00000546744 TMX2Q9Y320 296 aa12.83□□□□□ -0.36
PTCH1-212ENST00000546744 F5H5T6 163 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms