RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 I6L893 689 aaPredicted RBP14.73□□□□□ -0.05
HOXC11-202ENST00000546378 TIMM44O43615 452 aa14.73□□□□□ -0.05
HOXC11-202ENST00000546378 XYLBO75191 536 aa14.73□□□□□ -0.05
HOXC11-202ENST00000546378 PIGRP01833 764 aa14.73□□□□□ -0.05
HOXC11-202ENST00000546378 IL7RP16871 459 aa14.73□□□□□ -0.05
HOXC11-202ENST00000546378 CD68P34810 354 aaPredicted RBP14.73□□□□□ -0.05
HOXC11-202ENST00000546378 DIO3P55073 304 aa14.73□□□□□ -0.05
HOXC11-202ENST00000546378 FOXA1P55317 472 aa14.73□□□□□ -0.05
HOXC11-202ENST00000546378 C21orf59P57076 290 aa14.73□□□□□ -0.05
HOXC11-202ENST00000546378 SOX4Q06945 474 aaPredicted RBP14.73□□□□□ -0.05
HOXC11-202ENST00000546378 SPIDRQ14159 915 aa14.73□□□□□ -0.05
HOXC11-202ENST00000546378 AAK1Q2M2I8 961 aa14.73□□□□□ -0.05
HOXC11-202ENST00000546378 PABPC1LQ4VXU2 614 aaKnown RBP14.73□□□□□ -0.05
HOXC11-202ENST00000546378 GNASQ5JWF2 1037 aa14.73□□□□□ -0.05
HOXC11-202ENST00000546378 C6orf183Q5T699 404 aa14.73□□□□□ -0.05
HOXC11-202ENST00000546378 CENPLQ8N0S6 344 aaPredicted RBP14.73□□□□□ -0.05
HOXC11-202ENST00000546378 ATPAF2Q8N5M1 289 aa14.73□□□□□ -0.05
HOXC11-202ENST00000546378 TMCO5AQ8N6Q1 288 aa14.73□□□□□ -0.05
HOXC11-202ENST00000546378 FBXO30Q8TB52 745 aa14.73□□□□□ -0.05
HOXC11-202ENST00000546378 MUC3BQ9H195 1237 aa14.73□□□□□ -0.05
HOXC11-202ENST00000546378 HTRA2O43464 458 aaPredicted RBP14.72□□□□□ -0.05
HOXC11-202ENST00000546378 MATKP42679 507 aa14.72□□□□□ -0.05
HOXC11-202ENST00000546378 PRKCQQ04759 706 aa14.72□□□□□ -0.05
HOXC11-202ENST00000546378 PMS2P3Q13401 168 aa14.72□□□□□ -0.05
HOXC11-202ENST00000546378 GRB7Q14451 532 aa14.72□□□□□ -0.05
HOXC11-202ENST00000546378 HEATR4Q86WZ0 1026 aa14.72□□□□□ -0.05
HOXC11-202ENST00000546378 PPTC7Q8NI37 304 aa14.72□□□□□ -0.05
HOXC11-202ENST00000546378 ZFRQ96KR1 1074 aaKnown RBP14.72□□□□□ -0.05
HOXC11-202ENST00000546378 TSC22D4Q9Y3Q8 395 aa14.72□□□□□ -0.05
HOXC11-202ENST00000546378 SUPT3HB4E1H0 165 aa14.72□□□□□ -0.05
HOXC11-202ENST00000546378 TSPAN1O60635 241 aa14.72□□□□□ -0.05
HOXC11-202ENST00000546378 MMP3P08254 477 aa14.72□□□□□ -0.05
HOXC11-202ENST00000546378 OR4Q2P0C623 313 aa14.72□□□□□ -0.05
HOXC11-202ENST00000546378 PRKACGP22612 351 aa14.72□□□□□ -0.05
HOXC11-202ENST00000546378 NFYCQ13952 458 aa14.72□□□□□ -0.05
HOXC11-202ENST00000546378 HNRNPDQ14103 355 aaKnown RBP14.72□□□□□ -0.05
HOXC11-202ENST00000546378 NR1D2Q14995 579 aa14.72□□□□□ -0.05
HOXC11-202ENST00000546378 PGS1Q32NB8 556 aa14.72□□□□□ -0.05
HOXC11-202ENST00000546378 AARS2Q5JTZ9 985 aaKnown RBP14.72□□□□□ -0.05
HOXC11-202ENST00000546378 SPANXN3Q5MJ09 141 aa14.72□□□□□ -0.05
HOXC11-202ENST00000546378 ZC3HC1Q86WB0 502 aaKnown RBP14.72□□□□□ -0.05
HOXC11-202ENST00000546378 MFSD6LQ8IWD5 586 aa14.72□□□□□ -0.05
HOXC11-202ENST00000546378 ANKRD49Q8WVL7 239 aa14.72□□□□□ -0.05
HOXC11-202ENST00000546378 SPAG4Q9NPE6 437 aa14.72□□□□□ -0.05
HOXC11-202ENST00000546378 PTPRFP10586 1907 aa14.72□□□□□ -0.05
HOXC11-202ENST00000546378 A0A1W2PQ67 120 aa14.72□□□□□ -0.05
HOXC11-202ENST00000546378 A8MX80 341 aa14.72□□□□□ -0.05
HOXC11-202ENST00000546378 HGFP14210 728 aa14.72□□□□□ -0.05
HOXC11-202ENST00000546378 ELNP15502 786 aa14.72□□□□□ -0.05
HOXC11-202ENST00000546378 CNTFP26441 200 aa14.72□□□□□ -0.05
HOXC11-202ENST00000546378 CCR1P32246 355 aa14.72□□□□□ -0.05
HOXC11-202ENST00000546378 FLT3LGP49771 235 aa14.72□□□□□ -0.05
HOXC11-202ENST00000546378 TRIM32Q13049 653 aa14.72□□□□□ -0.05
HOXC11-202ENST00000546378 DNASE1L3Q13609 305 aa14.72□□□□□ -0.05
HOXC11-202ENST00000546378 EGFLAMQ63HQ2 1017 aa14.72□□□□□ -0.05
HOXC11-202ENST00000546378 LSMEM2Q8N112 164 aa14.72□□□□□ -0.05
HOXC11-202ENST00000546378 MARVELD2Q8N4S9 558 aa14.72□□□□□ -0.05
HOXC11-202ENST00000546378 ITFG2Q969R8 447 aa14.72□□□□□ -0.05
HOXC11-202ENST00000546378 NCLNQ969V3 563 aa14.72□□□□□ -0.05
HOXC11-202ENST00000546378 BTBD9Q96Q07 612 aa14.72□□□□□ -0.05
HOXC11-202ENST00000546378 C16orf70Q9BSU1 422 aa14.72□□□□□ -0.05
HOXC11-202ENST00000546378 OSBPL2Q9H1P3 480 aa14.72□□□□□ -0.05
HOXC11-202ENST00000546378 FAM96AQ9H5X1 160 aa14.72□□□□□ -0.05
HOXC11-202ENST00000546378 CACNA2D2Q9NY47 1150 aa14.72□□□□□ -0.05
HOXC11-202ENST00000546378 PAIP2BQ9ULR5 123 aaKnown RBP14.72□□□□□ -0.05
HOXC11-202ENST00000546378 GABRQQ9UN88 632 aa14.72□□□□□ -0.05
HOXC11-202ENST00000546378 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.71□□□□□ -0.05
HOXC11-202ENST00000546378 A0A0J9YYE9 177 aa14.71□□□□□ -0.05
HOXC11-202ENST00000546378 UBXN8O00124 270 aa14.71□□□□□ -0.05
HOXC11-202ENST00000546378 SDHDO14521 159 aa14.71□□□□□ -0.05
HOXC11-202ENST00000546378 BNIP3LO60238 219 aa14.71□□□□□ -0.05
HOXC11-202ENST00000546378 POMCP01189 267 aa14.71□□□□□ -0.05
HOXC11-202ENST00000546378 SNRPB2P08579 225 aaKnown RBP14.71□□□□□ -0.05
HOXC11-202ENST00000546378 NKX2-5P52952 324 aaPredicted RBP14.71□□□□□ -0.05
HOXC11-202ENST00000546378 RAB10P61026 200 aa14.71□□□□□ -0.05
HOXC11-202ENST00000546378 KCTD8Q6ZWB6 473 aa14.71□□□□□ -0.05
HOXC11-202ENST00000546378 FIBCD1Q8N539 461 aa14.71□□□□□ -0.05
HOXC11-202ENST00000546378 B3GALNT2Q8NCR0 500 aa14.71□□□□□ -0.05
HOXC11-202ENST00000546378 PAAF1Q9BRP4 392 aa14.71□□□□□ -0.05
HOXC11-202ENST00000546378 OSBPL11Q9BXB4 747 aa14.71□□□□□ -0.05
HOXC11-202ENST00000546378 FRMD8Q9BZ67 464 aaPredicted RBP14.71□□□□□ -0.05
HOXC11-202ENST00000546378 TBC1D23Q9NUY8 699 aa14.71□□□□□ -0.05
HOXC11-202ENST00000546378 FBXO5Q9UKT4 447 aa14.71□□□□□ -0.05
HOXC11-202ENST00000546378 FZD10Q9ULW2 581 aa14.71□□□□□ -0.05
HOXC11-202ENST00000546378 SORCS3Q9UPU3 1222 aa14.71□□□□□ -0.05
HOXC11-202ENST00000546378 SLC45A1Q9Y2W3 748 aa14.71□□□□□ -0.05
HOXC11-202ENST00000546378 CNTRLQ7Z7A1 2325 aa14.71□□□□□ -0.05
HOXC11-202ENST00000546378 K7EPI3 171 aa14.71□□□□□ -0.05
HOXC11-202ENST00000546378 C22orf31O95567 290 aa14.71□□□□□ -0.05
HOXC11-202ENST00000546378 ADRA1BP35368 520 aa14.71□□□□□ -0.05
HOXC11-202ENST00000546378 PTPRRQ15256 657 aa14.71□□□□□ -0.05
HOXC11-202ENST00000546378 TAZQ16635 292 aa14.71□□□□□ -0.05
HOXC11-202ENST00000546378 CYP2A13Q16696 494 aa14.71□□□□□ -0.05
HOXC11-202ENST00000546378 MAMDC4Q6UXC1 1216 aa14.71□□□□□ -0.05
HOXC11-202ENST00000546378 OSTM1Q86WC4 334 aa14.71□□□□□ -0.05
HOXC11-202ENST00000546378 ADCY4Q8NFM4 1077 aa14.71□□□□□ -0.05
HOXC11-202ENST00000546378 CLHC1Q8NHS4 586 aa14.71□□□□□ -0.05
HOXC11-202ENST00000546378 ISOC1Q96CN7 298 aa14.71□□□□□ -0.05
HOXC11-202ENST00000546378 FANCEQ9HB96 536 aa14.71□□□□□ -0.05
HOXC11-202ENST00000546378 ACTL7AQ9Y615 435 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms