RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 WNT9AO14904 365 aa16.9■□□□□ 0.3
LTBR-215ENST00000546296 FZD6O60353 706 aa16.9■□□□□ 0.3
LTBR-215ENST00000546296 ATP1A1P05023 1023 aaKnown RBP16.9■□□□□ 0.3
LTBR-215ENST00000546296 ELFN1P0C7U0 828 aa16.9■□□□□ 0.3
LTBR-215ENST00000546296 ENGP17813 658 aa16.9■□□□□ 0.3
LTBR-215ENST00000546296 HOXD11P31277 338 aaPredicted RBP16.9■□□□□ 0.3
LTBR-215ENST00000546296 VIPR1P32241 457 aa16.9■□□□□ 0.3
LTBR-215ENST00000546296 CD68P34810 354 aaPredicted RBP16.9■□□□□ 0.3
LTBR-215ENST00000546296 GRIA4P48058 902 aa16.9■□□□□ 0.3
LTBR-215ENST00000546296 RPL26P61254 145 aaKnown RBP16.9■□□□□ 0.3
LTBR-215ENST00000546296 SNX1Q13596 522 aa16.9■□□□□ 0.3
LTBR-215ENST00000546296 FGL2Q14314 439 aa16.9■□□□□ 0.3
LTBR-215ENST00000546296 ANKRD20A2Q5SQ80 823 aa16.9■□□□□ 0.3
LTBR-215ENST00000546296 ANKRD20A1Q5TYW2 823 aa16.9■□□□□ 0.3
LTBR-215ENST00000546296 ANKRD20A3Q5VUR7 823 aa16.9■□□□□ 0.3
LTBR-215ENST00000546296 FAM71DQ8N9W8 422 aa16.9■□□□□ 0.3
LTBR-215ENST00000546296 SLC35B2Q8TB61 432 aa16.9■□□□□ 0.3
LTBR-215ENST00000546296 ASB12Q8WXK4 309 aa16.9■□□□□ 0.3
LTBR-215ENST00000546296 RMDN1Q96DB5 314 aa16.9■□□□□ 0.3
LTBR-215ENST00000546296 SCRN2Q96FV2 425 aa16.9■□□□□ 0.3
LTBR-215ENST00000546296 FCRL5Q96RD9 977 aa16.9■□□□□ 0.3
LTBR-215ENST00000546296 USP29Q9HBJ7 922 aa16.9■□□□□ 0.3
LTBR-215ENST00000546296 FAM153AQ9UHL3 310 aa16.9■□□□□ 0.3
LTBR-215ENST00000546296 DNPEPQ9ULA0 475 aa16.9■□□□□ 0.3
LTBR-215ENST00000546296 RPL26L1Q9UNX3 145 aaKnown RBP16.9■□□□□ 0.3
LTBR-215ENST00000546296 ZNF148Q9UQR1 794 aa16.9■□□□□ 0.3
LTBR-215ENST00000546296 CA5BQ9Y2D0 317 aa16.9■□□□□ 0.3
LTBR-215ENST00000546296 LNP1A1A4G5 178 aa16.89■□□□□ 0.29
LTBR-215ENST00000546296 CFAP69A5D8W1 941 aa16.89■□□□□ 0.29
LTBR-215ENST00000546296 GOLGA8CPA6NN73 597 aa16.89■□□□□ 0.29
LTBR-215ENST00000546296 VILLO15195 856 aa16.89■□□□□ 0.29
LTBR-215ENST00000546296 LIASO43766 372 aa16.89■□□□□ 0.29
LTBR-215ENST00000546296 MT-CYBP00156 380 aaPredicted RBP16.89■□□□□ 0.29
LTBR-215ENST00000546296 ALPIP09923 528 aa16.89■□□□□ 0.29
LTBR-215ENST00000546296 C6P13671 934 aa16.89■□□□□ 0.29
LTBR-215ENST00000546296 HNF1BP35680 557 aa16.89■□□□□ 0.29
LTBR-215ENST00000546296 CDK18Q07002 472 aa16.89■□□□□ 0.29
LTBR-215ENST00000546296 ARHGEF7Q14155 803 aa16.89■□□□□ 0.29
LTBR-215ENST00000546296 PRPSAP1Q14558 356 aa16.89■□□□□ 0.29
LTBR-215ENST00000546296 ACOX1Q15067 660 aa16.89■□□□□ 0.29
LTBR-215ENST00000546296 DENND2CQ68D51 928 aa16.89■□□□□ 0.29
LTBR-215ENST00000546296 LAYNQ6UX15 382 aa16.89■□□□□ 0.29
LTBR-215ENST00000546296 MFSD2AQ8NA29 543 aa16.89■□□□□ 0.29
LTBR-215ENST00000546296 CCDC110Q8TBZ0 833 aa16.89■□□□□ 0.29
LTBR-215ENST00000546296 SPATA13Q96N96 652 aa16.89■□□□□ 0.29
LTBR-215ENST00000546296 LENG8Q96PV6 779 aaPredicted RBP16.89■□□□□ 0.29
LTBR-215ENST00000546296 TMEM121Q9BTD3 319 aa16.89■□□□□ 0.29
LTBR-215ENST00000546296 EDEM2Q9BV94 578 aa16.89■□□□□ 0.29
LTBR-215ENST00000546296 ZDHHC5Q9C0B5 715 aa16.89■□□□□ 0.29
LTBR-215ENST00000546296 ANKRD6Q9Y2G4 727 aa16.89■□□□□ 0.29
LTBR-215ENST00000546296 COQ6Q9Y2Z9 468 aa16.89■□□□□ 0.29
LTBR-215ENST00000546296 CEP192Q8TEP8 1941 aa16.89■□□□□ 0.29
LTBR-215ENST00000546296 GON4LQ3T8J9 2241 aa16.89■□□□□ 0.29
LTBR-215ENST00000546296 A0A0J9YYE9 177 aa16.88■□□□□ 0.29
LTBR-215ENST00000546296 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.88■□□□□ 0.29
LTBR-215ENST00000546296 C5orf60A6NFR6 353 aa16.88■□□□□ 0.29
LTBR-215ENST00000546296 TLR4O00206 839 aa16.88■□□□□ 0.29
LTBR-215ENST00000546296 FPGTO14772 594 aa16.88■□□□□ 0.29
LTBR-215ENST00000546296 RAD51BO15315 384 aa16.88■□□□□ 0.29
LTBR-215ENST00000546296 GDF9O60383 454 aa16.88■□□□□ 0.29
LTBR-215ENST00000546296 MAGEC1O60732 1142 aa16.88■□□□□ 0.29
LTBR-215ENST00000546296 OPHN1O60890 802 aa16.88■□□□□ 0.29
LTBR-215ENST00000546296 PRLP01236 227 aa16.88■□□□□ 0.29
LTBR-215ENST00000546296 TRBC1P01850 177 aa16.88■□□□□ 0.29
LTBR-215ENST00000546296 WNT3AP56704 352 aa16.88■□□□□ 0.29
LTBR-215ENST00000546296 CLDN2P57739 230 aa16.88■□□□□ 0.29
LTBR-215ENST00000546296 ARHGAP8P85298 464 aa16.88■□□□□ 0.29
LTBR-215ENST00000546296 RALGDSQ12967 914 aa16.88■□□□□ 0.29
LTBR-215ENST00000546296 GRIK2Q13002 908 aa16.88■□□□□ 0.29
LTBR-215ENST00000546296 GALNT3Q14435 633 aa16.88■□□□□ 0.29
LTBR-215ENST00000546296 PTPRRQ15256 657 aa16.88■□□□□ 0.29
LTBR-215ENST00000546296 SLC14A2Q15849 920 aa16.88■□□□□ 0.29
LTBR-215ENST00000546296 KIF19Q2TAC6 998 aa16.88■□□□□ 0.29
LTBR-215ENST00000546296 IL27RAQ6UWB1 636 aa16.88■□□□□ 0.29
LTBR-215ENST00000546296 LIPIQ6XZB0 460 aa16.88■□□□□ 0.29
LTBR-215ENST00000546296 ARHGEF18Q6ZSZ5 1173 aa16.88■□□□□ 0.29
LTBR-215ENST00000546296 TADA1Q96BN2 335 aa16.88■□□□□ 0.29
LTBR-215ENST00000546296 KLHDC7BQ96G42 594 aa16.88■□□□□ 0.29
LTBR-215ENST00000546296 MLPHQ9BV36 600 aaPredicted RBP16.88■□□□□ 0.29
LTBR-215ENST00000546296 GBA3Q9H227 469 aa16.88■□□□□ 0.29
LTBR-215ENST00000546296 RXFP3Q9NSD7 469 aa16.88■□□□□ 0.29
LTBR-215ENST00000546296 ZKSCAN5Q9Y2L8 839 aa16.88■□□□□ 0.29
LTBR-215ENST00000546296 PPIL1Q9Y3C6 166 aa16.88■□□□□ 0.29
LTBR-215ENST00000546296 HS3ST3A1Q9Y663 406 aa16.88■□□□□ 0.29
LTBR-215ENST00000546296 A0A1W2PR77 199 aa16.87■□□□□ 0.29
LTBR-215ENST00000546296 NPIPB15A6NHN6 443 aaPredicted RBP16.87■□□□□ 0.29
LTBR-215ENST00000546296 ANKRD66B4E2M5 251 aa16.87■□□□□ 0.29
LTBR-215ENST00000546296 ANXA9O76027 345 aa16.87■□□□□ 0.29
LTBR-215ENST00000546296 HEXIM1O94992 359 aaKnown RBP16.87■□□□□ 0.29
LTBR-215ENST00000546296 WNT1P04628 370 aa16.87■□□□□ 0.29
LTBR-215ENST00000546296 STIP1P31948 543 aaKnown RBP16.87■□□□□ 0.29
LTBR-215ENST00000546296 GEMP55040 296 aa16.87■□□□□ 0.29
LTBR-215ENST00000546296 LRRC14Q15048 493 aa16.87■□□□□ 0.29
LTBR-215ENST00000546296 CCNG2Q16589 344 aa16.87■□□□□ 0.29
LTBR-215ENST00000546296 QPCTQ16769 361 aa16.87■□□□□ 0.29
LTBR-215ENST00000546296 IQCHQ86VS3 1027 aa16.87■□□□□ 0.29
LTBR-215ENST00000546296 TMEM145Q8NBT3 493 aa16.87■□□□□ 0.29
LTBR-215ENST00000546296 IPMKQ8NFU5 416 aa16.87■□□□□ 0.29
LTBR-215ENST00000546296 MS4A14Q96JA4 679 aa16.87■□□□□ 0.29
LTBR-215ENST00000546296 PPP1R2P1Q96PQ5 205 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms