RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 NFKBIAP25963 317 aa11.93□□□□□ -0.5
YBX3-217ENST00000546164 CTNNA2P26232 953 aa11.93□□□□□ -0.5
YBX3-217ENST00000546164 IGFALSP35858 605 aa11.93□□□□□ -0.5
YBX3-217ENST00000546164 COPS2P61201 443 aa11.93□□□□□ -0.5
YBX3-217ENST00000546164 YPEL5P62699 121 aa11.93□□□□□ -0.5
YBX3-217ENST00000546164 IL9RQ01113 521 aa11.93□□□□□ -0.5
YBX3-217ENST00000546164 KIF5AQ12840 1032 aa11.93□□□□□ -0.5
YBX3-217ENST00000546164 FZD2Q14332 565 aa11.93□□□□□ -0.5
YBX3-217ENST00000546164 IHHQ14623 411 aa11.93□□□□□ -0.5
YBX3-217ENST00000546164 WSCD2Q2TBF2 565 aa11.93□□□□□ -0.5
YBX3-217ENST00000546164 ARMC12Q5T9G4 340 aa11.93□□□□□ -0.5
YBX3-217ENST00000546164 LIPIQ6XZB0 460 aa11.93□□□□□ -0.5
YBX3-217ENST00000546164 PTAR1Q7Z6K3 402 aaPredicted RBP11.93□□□□□ -0.5
YBX3-217ENST00000546164 KIAA1328Q86T90 577 aa11.93□□□□□ -0.5
YBX3-217ENST00000546164 CBARPQ8N350 705 aaPredicted RBP11.93□□□□□ -0.5
YBX3-217ENST00000546164 CNTD1Q8N815 330 aa11.93□□□□□ -0.5
YBX3-217ENST00000546164 KIAA1524Q8TCG1 905 aa11.93□□□□□ -0.5
YBX3-217ENST00000546164 RHBDD1Q8TEB9 315 aa11.93□□□□□ -0.5
YBX3-217ENST00000546164 KRT35Q92764 455 aa11.93□□□□□ -0.5
YBX3-217ENST00000546164 SCRN2Q96FV2 425 aa11.93□□□□□ -0.5
YBX3-217ENST00000546164 B4GALT6Q9UBX8 382 aa11.93□□□□□ -0.5
YBX3-217ENST00000546164 WASF3Q9UPY6 502 aa11.93□□□□□ -0.5
YBX3-217ENST00000546164 RAI2Q9Y5P3 530 aa11.93□□□□□ -0.5
YBX3-217ENST00000546164 TMEM131Q92545 1883 aa11.93□□□□□ -0.5
YBX3-217ENST00000546164 ARID1BQ8NFD5 2236 aaPredicted RBP11.92□□□□□ -0.5
YBX3-217ENST00000546164 CCDC66A2RUB6 948 aa11.92□□□□□ -0.5
YBX3-217ENST00000546164 GRID2IPA4D2P6 1211 aa11.92□□□□□ -0.5
YBX3-217ENST00000546164 KCNK1O00180 336 aa11.92□□□□□ -0.5
YBX3-217ENST00000546164 LZTS3O60299 673 aaPredicted RBP11.92□□□□□ -0.5
YBX3-217ENST00000546164 CST8O60676 142 aa11.92□□□□□ -0.5
YBX3-217ENST00000546164 NEBLO76041 1014 aa11.92□□□□□ -0.5
YBX3-217ENST00000546164 DKK1O94907 266 aa11.92□□□□□ -0.5
YBX3-217ENST00000546164 JCHAINP01591 159 aa11.92□□□□□ -0.5
YBX3-217ENST00000546164 ELFN1P0C7U0 828 aa11.92□□□□□ -0.5
YBX3-217ENST00000546164 KRT10P13645 584 aa11.92□□□□□ -0.5
YBX3-217ENST00000546164 NME1P15531 152 aaKnown RBP11.92□□□□□ -0.5
YBX3-217ENST00000546164 PTPN7P35236 360 aa11.92□□□□□ -0.5
YBX3-217ENST00000546164 PEX5P50542 639 aa11.92□□□□□ -0.5
YBX3-217ENST00000546164 RPL26P61254 145 aaKnown RBP11.92□□□□□ -0.5
YBX3-217ENST00000546164 DYNLT1P63172 113 aa11.92□□□□□ -0.5
YBX3-217ENST00000546164 DSC2Q02487 901 aa11.92□□□□□ -0.5
YBX3-217ENST00000546164 NIPAL4Q0D2K0 466 aa11.92□□□□□ -0.5
YBX3-217ENST00000546164 BNIP3Q12983 259 aa11.92□□□□□ -0.5
YBX3-217ENST00000546164 ZBTB17Q13105 803 aa11.92□□□□□ -0.5
YBX3-217ENST00000546164 PTK2BQ14289 1009 aa11.92□□□□□ -0.5
YBX3-217ENST00000546164 LRRC14Q15048 493 aa11.92□□□□□ -0.5
YBX3-217ENST00000546164 PRKD1Q15139 912 aaPredicted RBP11.92□□□□□ -0.5
YBX3-217ENST00000546164 IRF4Q15306 451 aa11.92□□□□□ -0.5
YBX3-217ENST00000546164 NPNTQ6UXI9 565 aa11.92□□□□□ -0.5
YBX3-217ENST00000546164 PARGQ86W56 976 aa11.92□□□□□ -0.5
YBX3-217ENST00000546164 GATAD2AQ86YP4 633 aa11.92□□□□□ -0.5
YBX3-217ENST00000546164 PAF1Q8N7H5 531 aa11.92□□□□□ -0.5
YBX3-217ENST00000546164 PDCD6IPQ8WUM4 868 aaKnown RBP11.92□□□□□ -0.5
YBX3-217ENST00000546164 LRRN4Q8WUT4 740 aa11.92□□□□□ -0.5
YBX3-217ENST00000546164 PIH1D2Q8WWB5 315 aa11.92□□□□□ -0.5
YBX3-217ENST00000546164 DESI2Q9BSY9 194 aa11.92□□□□□ -0.5
YBX3-217ENST00000546164 TDRD1Q9BXT4 1180 aaKnown RBP11.92□□□□□ -0.5
YBX3-217ENST00000546164 MBNL1Q9NR56 388 aaKnown RBP11.92□□□□□ -0.5
YBX3-217ENST00000546164 KCTD5Q9NXV2 234 aa11.92□□□□□ -0.5
YBX3-217ENST00000546164 RPL26L1Q9UNX3 145 aaKnown RBP11.92□□□□□ -0.5
YBX3-217ENST00000546164 EFR3BQ9Y2G0 817 aa11.92□□□□□ -0.5
YBX3-217ENST00000546164 TP53BP1Q12888 1972 aaPredicted RBP11.91□□□□□ -0.5
YBX3-217ENST00000546164 SHROOM3Q8TF72 1996 aa11.91□□□□□ -0.5
YBX3-217ENST00000546164 PSMD11O00231 422 aa11.91□□□□□ -0.5
YBX3-217ENST00000546164 TNFSF14O43557 240 aa11.91□□□□□ -0.5
YBX3-217ENST00000546164 PIAS2O75928 621 aa11.91□□□□□ -0.5
YBX3-217ENST00000546164 RECQL5O94762 991 aaPredicted RBP11.91□□□□□ -0.5
YBX3-217ENST00000546164 HEXIM1O94992 359 aaKnown RBP11.91□□□□□ -0.5
YBX3-217ENST00000546164 CSF2P04141 144 aa11.91□□□□□ -0.5
YBX3-217ENST00000546164 MMP2P08253 660 aa11.91□□□□□ -0.5
YBX3-217ENST00000546164 PDHA1P08559 390 aa11.91□□□□□ -0.5
YBX3-217ENST00000546164 FTH1P19P0C7X4 201 aa11.91□□□□□ -0.5
YBX3-217ENST00000546164 CYP2A6P11509 494 aaPredicted RBP11.91□□□□□ -0.5
YBX3-217ENST00000546164 PECAM1P16284 738 aaPredicted RBP11.91□□□□□ -0.5
YBX3-217ENST00000546164 GM2AP17900 193 aa11.91□□□□□ -0.5
YBX3-217ENST00000546164 CA4P22748 312 aa11.91□□□□□ -0.5
YBX3-217ENST00000546164 VIPR1P32241 457 aa11.91□□□□□ -0.5
YBX3-217ENST00000546164 NAP1L1P55209 391 aaKnown RBP11.91□□□□□ -0.5
YBX3-217ENST00000546164 HNRNPKP61978 463 aaKnown RBP eCLIP11.91□□□□□ -0.5
YBX3-217ENST00000546164 SEMG2Q02383 582 aa11.91□□□□□ -0.5
YBX3-217ENST00000546164 ADCY2Q08462 1091 aa11.91□□□□□ -0.5
YBX3-217ENST00000546164 ITKQ08881 620 aa11.91□□□□□ -0.5
YBX3-217ENST00000546164 AP1B1Q10567 949 aa11.91□□□□□ -0.5
YBX3-217ENST00000546164 MTM1Q13496 603 aa11.91□□□□□ -0.5
YBX3-217ENST00000546164 PDE1CQ14123 709 aaPredicted RBP11.91□□□□□ -0.5
YBX3-217ENST00000546164 SLC14A2Q15849 920 aa11.91□□□□□ -0.5
YBX3-217ENST00000546164 CNGA3Q16281 694 aa11.91□□□□□ -0.5
YBX3-217ENST00000546164 TPRG1LQ5T0D9 272 aa11.91□□□□□ -0.5
YBX3-217ENST00000546164 MACC1Q6ZN28 852 aa11.91□□□□□ -0.5
YBX3-217ENST00000546164 BBS12Q6ZW61 710 aa11.91□□□□□ -0.5
YBX3-217ENST00000546164 USP45Q70EL2 814 aa11.91□□□□□ -0.5
YBX3-217ENST00000546164 SYCE1Q8N0S2 351 aa11.91□□□□□ -0.5
YBX3-217ENST00000546164 NDUFAF2Q8N183 169 aa11.91□□□□□ -0.5
YBX3-217ENST00000546164 CCDC112Q8NEF3 446 aa11.91□□□□□ -0.5
YBX3-217ENST00000546164 UBE2Q2Q8WVN8 375 aa11.91□□□□□ -0.5
YBX3-217ENST00000546164 P3H4Q92791 437 aa11.91□□□□□ -0.5
YBX3-217ENST00000546164 TBATAQ96M53 351 aa11.91□□□□□ -0.5
YBX3-217ENST00000546164 COQ10AQ96MF6 247 aa11.91□□□□□ -0.5
YBX3-217ENST00000546164 TOR4AQ9NXH8 423 aa11.91□□□□□ -0.5
YBX3-217ENST00000546164 ANGPTL2Q9UKU9 493 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms