RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 LRRC52Q8N7C0 313 aa14.27□□□□□ -0.13
SRP54-202ENST00000546080 GOLM1Q8NBJ4 401 aa14.27□□□□□ -0.13
SRP54-202ENST00000546080 BEST2Q8NFU1 509 aa14.27□□□□□ -0.13
SRP54-202ENST00000546080 HDAC10Q969S8 669 aa14.27□□□□□ -0.13
SRP54-202ENST00000546080 NT5C3BQ969T7 300 aa14.27□□□□□ -0.13
SRP54-202ENST00000546080 PHF21BQ96EK2 531 aa14.27□□□□□ -0.13
SRP54-202ENST00000546080 CNDP2Q96KP4 475 aaKnown RBP14.27□□□□□ -0.13
SRP54-202ENST00000546080 MYRFLQ96LU7 910 aa14.27□□□□□ -0.13
SRP54-202ENST00000546080 TEKT5Q96M29 485 aa14.27□□□□□ -0.13
SRP54-202ENST00000546080 C1orf50Q9BV19 199 aa14.27□□□□□ -0.13
SRP54-202ENST00000546080 SEZ6LQ9BYH1 1024 aa14.27□□□□□ -0.13
SRP54-202ENST00000546080 FBRSL1Q9HCM7 1045 aaKnown RBP14.27□□□□□ -0.13
SRP54-202ENST00000546080 IGSF5Q9NSI5 407 aa14.27□□□□□ -0.13
SRP54-202ENST00000546080 ABCD2Q9UBJ2 740 aa14.27□□□□□ -0.13
SRP54-202ENST00000546080 ZNF112Q9UJU3 913 aa14.27□□□□□ -0.13
SRP54-202ENST00000546080 ITGB1BP2Q9UKP3 347 aa14.27□□□□□ -0.13
SRP54-202ENST00000546080 TCAF1Q9Y4C2 921 aa14.27□□□□□ -0.13
SRP54-202ENST00000546080 TRAF6Q9Y4K3 522 aa14.27□□□□□ -0.13
SRP54-202ENST00000546080 SLC30A1Q9Y6M5 507 aa14.27□□□□□ -0.13
SRP54-202ENST00000546080 A0A0J9YYE9 177 aa14.26□□□□□ -0.13
SRP54-202ENST00000546080 IQCA1LA6NCM1 817 aa14.26□□□□□ -0.13
SRP54-202ENST00000546080 ACOX3O15254 700 aa14.26□□□□□ -0.13
SRP54-202ENST00000546080 BCL10O95999 233 aa14.26□□□□□ -0.13
SRP54-202ENST00000546080 GPX3P22352 226 aa14.26□□□□□ -0.13
SRP54-202ENST00000546080 OXTRP30559 389 aa14.26□□□□□ -0.13
SRP54-202ENST00000546080 ADRA1BP35368 520 aa14.26□□□□□ -0.13
SRP54-202ENST00000546080 YAP1P46937 504 aaKnown RBP14.26□□□□□ -0.13
SRP54-202ENST00000546080 RXRGP48443 463 aa14.26□□□□□ -0.13
SRP54-202ENST00000546080 HLCSP50747 726 aa14.26□□□□□ -0.13
SRP54-202ENST00000546080 GJA9P57773 515 aa14.26□□□□□ -0.13
SRP54-202ENST00000546080 KCNC4Q03721 635 aa14.26□□□□□ -0.13
SRP54-202ENST00000546080 CCDC92Q53HC0 331 aaPredicted RBP14.26□□□□□ -0.13
SRP54-202ENST00000546080 INTS6LQ5JSJ4 861 aaKnown RBP14.26□□□□□ -0.13
SRP54-202ENST00000546080 AGAP9Q5VTM2 703 aa14.26□□□□□ -0.13
SRP54-202ENST00000546080 SYPL2Q5VXT5 272 aa14.26□□□□□ -0.13
SRP54-202ENST00000546080 EGFLAMQ63HQ2 1017 aa14.26□□□□□ -0.13
SRP54-202ENST00000546080 CLEC6AQ6EIG7 209 aa14.26□□□□□ -0.13
SRP54-202ENST00000546080 ZNF280DQ6N043 979 aa14.26□□□□□ -0.13
SRP54-202ENST00000546080 ESRP1Q6NXG1 681 aaKnown RBP14.26□□□□□ -0.13
SRP54-202ENST00000546080 LARP4Q71RC2 724 aaKnown RBP eCLIP14.26□□□□□ -0.13
SRP54-202ENST00000546080 DDIASQ8IXT1 998 aa14.26□□□□□ -0.13
SRP54-202ENST00000546080 ADGRG5Q8IZF4 528 aa14.26□□□□□ -0.13
SRP54-202ENST00000546080 CRYBG2Q8N1P7 616 aa14.26□□□□□ -0.13
SRP54-202ENST00000546080 PPHLN1Q8NEY8 458 aaKnown RBP14.26□□□□□ -0.13
SRP54-202ENST00000546080 PNPT1Q8TCS8 783 aaKnown RBP14.26□□□□□ -0.13
SRP54-202ENST00000546080 ZMAT2Q96NC0 199 aaKnown RBP14.26□□□□□ -0.13
SRP54-202ENST00000546080 MTG1Q9BT17 334 aaPredicted RBP14.26□□□□□ -0.13
SRP54-202ENST00000546080 YTHDF1Q9BYJ9 559 aaKnown RBP14.26□□□□□ -0.13
SRP54-202ENST00000546080 TUT1Q9H6E5 874 aaKnown RBP14.26□□□□□ -0.13
SRP54-202ENST00000546080 ACTR3BQ9P1U1 418 aa14.26□□□□□ -0.13
SRP54-202ENST00000546080 HACL1Q9UJ83 578 aa14.26□□□□□ -0.13
SRP54-202ENST00000546080 ERGIC3Q9Y282 383 aa14.26□□□□□ -0.13
SRP54-202ENST00000546080 SCN1AP35498 2009 aa14.26□□□□□ -0.13
SRP54-202ENST00000546080 ALDH2P05091 517 aa14.26□□□□□ -0.13
SRP54-202ENST00000546080 HSD17B1P14061 328 aa14.26□□□□□ -0.13
SRP54-202ENST00000546080 CPB1P15086 417 aa14.26□□□□□ -0.13
SRP54-202ENST00000546080 TKTL1P51854 596 aa14.26□□□□□ -0.13
SRP54-202ENST00000546080 TMBIM6P55061 237 aa14.26□□□□□ -0.13
SRP54-202ENST00000546080 POU4F1Q01851 419 aa14.26□□□□□ -0.13
SRP54-202ENST00000546080 GNA12Q03113 381 aa14.26□□□□□ -0.13
SRP54-202ENST00000546080 LAMC2Q13753 1193 aa14.26□□□□□ -0.13
SRP54-202ENST00000546080 ZNF470Q6ECI4 717 aa14.26□□□□□ -0.13
SRP54-202ENST00000546080 GALNT18Q6P9A2 607 aa14.26□□□□□ -0.13
SRP54-202ENST00000546080 CHST15Q7LFX5 561 aaPredicted RBP14.26□□□□□ -0.13
SRP54-202ENST00000546080 OTOP3Q7RTS5 596 aa14.26□□□□□ -0.13
SRP54-202ENST00000546080 TRPV3Q8NET8 790 aa14.26□□□□□ -0.13
SRP54-202ENST00000546080 COPS5Q92905 334 aa14.26□□□□□ -0.13
SRP54-202ENST00000546080 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.26□□□□□ -0.13
SRP54-202ENST00000546080 C18orf25Q96B23 403 aaPredicted RBP14.26□□□□□ -0.13
SRP54-202ENST00000546080 C19orf60Q96EN9 201 aa14.26□□□□□ -0.13
SRP54-202ENST00000546080 SNX27Q96L92 541 aa14.26□□□□□ -0.13
SRP54-202ENST00000546080 TBL1YQ9BQ87 522 aa14.26□□□□□ -0.13
SRP54-202ENST00000546080 ZFYVE28Q9HCC9 887 aa14.26□□□□□ -0.13
SRP54-202ENST00000546080 SEPT3Q9UH03 358 aa14.26□□□□□ -0.13
SRP54-202ENST00000546080 DERAQ9Y315 318 aa14.26□□□□□ -0.13
SRP54-202ENST00000546080 NDUFAF1Q9Y375 327 aa14.26□□□□□ -0.13
SRP54-202ENST00000546080 CORINQ9Y5Q5 1042 aa14.26□□□□□ -0.13
SRP54-202ENST00000546080 ZSWIM8A7E2V4 1837 aa14.26□□□□□ -0.13
SRP54-202ENST00000546080 CITO14578 2027 aa14.25□□□□□ -0.13
SRP54-202ENST00000546080 C1orf232A0A0U1RR37 186 aa14.25□□□□□ -0.13
SRP54-202ENST00000546080 TMEM247A6NEH6 219 aa14.25□□□□□ -0.13
SRP54-202ENST00000546080 ANGPT2O15123 496 aa14.25□□□□□ -0.13
SRP54-202ENST00000546080 ARPC2O15144 300 aa14.25□□□□□ -0.13
SRP54-202ENST00000546080 CPNE6O95741 557 aa14.25□□□□□ -0.13
SRP54-202ENST00000546080 GPIP06744 558 aa14.25□□□□□ -0.13
SRP54-202ENST00000546080 ALDOCP09972 364 aaKnown RBP14.25□□□□□ -0.13
SRP54-202ENST00000546080 GFAPP14136 432 aa14.25□□□□□ -0.13
SRP54-202ENST00000546080 INSRRP14616 1297 aa14.25□□□□□ -0.13
SRP54-202ENST00000546080 MATN1P21941 496 aa14.25□□□□□ -0.13
SRP54-202ENST00000546080 TKTP29401 623 aaKnown RBP14.25□□□□□ -0.13
SRP54-202ENST00000546080 RPS9P46781 194 aaKnown RBP14.25□□□□□ -0.13
SRP54-202ENST00000546080 TMED10P49755 219 aaKnown RBP14.25□□□□□ -0.13
SRP54-202ENST00000546080 GALNT1Q10472 559 aaPredicted RBP14.25□□□□□ -0.13
SRP54-202ENST00000546080 MTA1Q13330 715 aa14.25□□□□□ -0.13
SRP54-202ENST00000546080 CYP51A1Q16850 503 aa14.25□□□□□ -0.13
SRP54-202ENST00000546080 CYBRD1Q53TN4 286 aa14.25□□□□□ -0.13
SRP54-202ENST00000546080 CCNYL2Q5T2Q4 361 aa14.25□□□□□ -0.13
SRP54-202ENST00000546080 BTBD8Q5XKL5 378 aa14.25□□□□□ -0.13
SRP54-202ENST00000546080 RIOX2Q8IUF8 465 aa14.25□□□□□ -0.13
SRP54-202ENST00000546080 SLC15A3Q8IY34 581 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms