RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 S100ZQ8WXG8 99 aa12.57□□□□□ -0.4
COL4A6-209ENST00000545689 CENPIQ92674 756 aaPredicted RBP12.57□□□□□ -0.4
COL4A6-209ENST00000545689 CAPN10Q9HC96 672 aa12.57□□□□□ -0.4
COL4A6-209ENST00000545689 TMEM39AQ9NV64 488 aa12.57□□□□□ -0.4
COL4A6-209ENST00000545689 DMTF1Q9Y222 760 aa12.57□□□□□ -0.4
COL4A6-209ENST00000545689 NCKAP1Q9Y2A7 1128 aa12.57□□□□□ -0.4
COL4A6-209ENST00000545689 PRR23AA6NEV1 266 aa12.57□□□□□ -0.4
COL4A6-209ENST00000545689 DNAJA2O60884 412 aa12.57□□□□□ -0.4
COL4A6-209ENST00000545689 TBL1XO60907 577 aa12.57□□□□□ -0.4
COL4A6-209ENST00000545689 SLC22A3O75751 556 aa12.57□□□□□ -0.4
COL4A6-209ENST00000545689 CHRNB2P17787 502 aa12.57□□□□□ -0.4
COL4A6-209ENST00000545689 GSTM5P46439 218 aa12.57□□□□□ -0.4
COL4A6-209ENST00000545689 KLF10Q13118 480 aa12.57□□□□□ -0.4
COL4A6-209ENST00000545689 MZT2AQ6P582 158 aa12.57□□□□□ -0.4
COL4A6-209ENST00000545689 PQLC1Q8N2U9 271 aa12.57□□□□□ -0.4
COL4A6-209ENST00000545689 PLGRKTQ9HBL7 147 aa12.57□□□□□ -0.4
COL4A6-209ENST00000545689 CLN6Q9NWW5 311 aa12.57□□□□□ -0.4
COL4A6-209ENST00000545689 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.57□□□□□ -0.4
COL4A6-209ENST00000545689 PRR5-ARHGAP8B1AHC4 643 aa12.57□□□□□ -0.4
COL4A6-209ENST00000545689 PQBP1O60828 265 aaKnown RBP12.57□□□□□ -0.4
COL4A6-209ENST00000545689 CLDN11O75508 207 aa12.57□□□□□ -0.4
COL4A6-209ENST00000545689 EPHA3P29320 983 aa12.57□□□□□ -0.4
COL4A6-209ENST00000545689 LIMK2P53671 638 aa12.57□□□□□ -0.4
COL4A6-209ENST00000545689 ARHGAP8P85298 464 aa12.57□□□□□ -0.4
COL4A6-209ENST00000545689 ASTE1Q2TB18 679 aaPredicted RBP12.57□□□□□ -0.4
COL4A6-209ENST00000545689 FBXL19Q6PCT2 694 aa12.57□□□□□ -0.4
COL4A6-209ENST00000545689 LBX2Q6XYB7 198 aa12.57□□□□□ -0.4
COL4A6-209ENST00000545689 TIFAQ96CG3 184 aa12.57□□□□□ -0.4
COL4A6-209ENST00000545689 SENP6Q9GZR1 1112 aaPredicted RBP12.57□□□□□ -0.4
COL4A6-209ENST00000545689 GSTK1Q9Y2Q3 226 aa12.57□□□□□ -0.4
COL4A6-209ENST00000545689 RBM47A0AV96 593 aaKnown RBP12.57□□□□□ -0.4
COL4A6-209ENST00000545689 FAM13CQ8NE31 585 aa12.57□□□□□ -0.4
COL4A6-209ENST00000545689 OSBPL10Q9BXB5 764 aa12.57□□□□□ -0.4
COL4A6-209ENST00000545689 NUDT5Q9UKK9 219 aa12.57□□□□□ -0.4
COL4A6-209ENST00000545689 PSME2Q9UL46 239 aa12.57□□□□□ -0.4
COL4A6-209ENST00000545689 RAB26Q9ULW5 256 aa12.57□□□□□ -0.4
COL4A6-209ENST00000545689 RHOQP17081 205 aa12.56□□□□□ -0.4
COL4A6-209ENST00000545689 FGFR3P22607 806 aa12.56□□□□□ -0.4
COL4A6-209ENST00000545689 RPL38P63173 70 aaKnown RBP12.56□□□□□ -0.4
COL4A6-209ENST00000545689 CTBP1Q13363 440 aa12.56□□□□□ -0.4
COL4A6-209ENST00000545689 ATP1A4Q13733 1029 aa12.56□□□□□ -0.4
COL4A6-209ENST00000545689 ECHDC2Q86YB7 292 aa12.56□□□□□ -0.4
COL4A6-209ENST00000545689 DENND1CQ8IV53 801 aa12.56□□□□□ -0.4
COL4A6-209ENST00000545689 CXorf40AQ8TE69 158 aa12.56□□□□□ -0.4
COL4A6-209ENST00000545689 CLEC4DQ8WXI8 215 aa12.56□□□□□ -0.4
COL4A6-209ENST00000545689 SLITRK2Q9H156 845 aa12.56□□□□□ -0.4
COL4A6-209ENST00000545689 TMPRSS4Q9NRS4 437 aa12.56□□□□□ -0.4
COL4A6-209ENST00000545689 PRKAG3Q9UGI9 489 aa12.56□□□□□ -0.4
COL4A6-209ENST00000545689 MCM8Q9UJA3 840 aa12.56□□□□□ -0.4
COL4A6-209ENST00000545689 SALL4Q9UJQ4 1053 aa12.56□□□□□ -0.4
COL4A6-209ENST00000545689 PCDHA2Q9Y5H9 948 aa12.56□□□□□ -0.4
COL4A6-209ENST00000545689 GMPPBQ9Y5P6 360 aa12.56□□□□□ -0.4
COL4A6-209ENST00000545689 AP4B1Q9Y6B7 739 aa12.56□□□□□ -0.4
COL4A6-209ENST00000545689 SMIM28A0A1B0GU29 152 aa12.56□□□□□ -0.4
COL4A6-209ENST00000545689 SPTLC1O15269 473 aa12.56□□□□□ -0.4
COL4A6-209ENST00000545689 STX11O75558 287 aa12.56□□□□□ -0.4
COL4A6-209ENST00000545689 IPO13O94829 963 aaKnown RBP12.56□□□□□ -0.4
COL4A6-209ENST00000545689 NUP62P37198 522 aaPredicted RBP12.56□□□□□ -0.4
COL4A6-209ENST00000545689 MBTD1Q05BQ5 628 aa12.56□□□□□ -0.4
COL4A6-209ENST00000545689 MFSD4BQ5TF39 518 aa12.56□□□□□ -0.4
COL4A6-209ENST00000545689 TNS4Q8IZW8 715 aa12.56□□□□□ -0.4
COL4A6-209ENST00000545689 HDAC10Q969S8 669 aa12.56□□□□□ -0.4
COL4A6-209ENST00000545689 DEPDC7Q96QD5 511 aa12.56□□□□□ -0.4
COL4A6-209ENST00000545689 OMDQ99983 421 aa12.56□□□□□ -0.4
COL4A6-209ENST00000545689 MECRQ9BV79 373 aa12.56□□□□□ -0.4
COL4A6-209ENST00000545689 PTGES3LE9PB15 166 aa12.56□□□□□ -0.4
COL4A6-209ENST00000545689 MFSD11O43934 449 aa12.56□□□□□ -0.4
COL4A6-209ENST00000545689 NRP2O60462 931 aa12.56□□□□□ -0.4
COL4A6-209ENST00000545689 CRATP43155 626 aa12.56□□□□□ -0.4
COL4A6-209ENST00000545689 ROR2Q01974 943 aaKnown RBP12.56□□□□□ -0.4
COL4A6-209ENST00000545689 HNRNPABQ99729 332 aaKnown RBP12.56□□□□□ -0.4
COL4A6-209ENST00000545689 PTPRHQ9HD43 1115 aa12.56□□□□□ -0.4
COL4A6-209ENST00000545689 ARIH1Q9Y4X5 557 aaPredicted RBP12.56□□□□□ -0.4
COL4A6-209ENST00000545689 A0A1W2PQ67 120 aa12.56□□□□□ -0.4
COL4A6-209ENST00000545689 TSPAN1O60635 241 aa12.56□□□□□ -0.4
COL4A6-209ENST00000545689 C2P06681 752 aa12.56□□□□□ -0.4
COL4A6-209ENST00000545689 RFX3P48380 749 aa12.56□□□□□ -0.4
COL4A6-209ENST00000545689 YBEYP58557 167 aaPredicted RBP12.56□□□□□ -0.4
COL4A6-209ENST00000545689 SPIDRQ14159 915 aa12.56□□□□□ -0.4
COL4A6-209ENST00000545689 SLC1A5Q15758 541 aa12.56□□□□□ -0.4
COL4A6-209ENST00000545689 CXCL17Q6UXB2 119 aa12.56□□□□□ -0.4
COL4A6-209ENST00000545689 GPR180Q86V85 440 aa12.56□□□□□ -0.4
COL4A6-209ENST00000545689 OR7A2PQ8NGA2 310 aa12.56□□□□□ -0.4
COL4A6-209ENST00000545689 LINGO1Q96FE5 620 aa12.56□□□□□ -0.4
COL4A6-209ENST00000545689 FANCEQ9HB96 536 aa12.56□□□□□ -0.4
COL4A6-209ENST00000545689 MAN1C1Q9NR34 630 aa12.56□□□□□ -0.4
COL4A6-209ENST00000545689 CLDN5O00501 218 aa12.56□□□□□ -0.4
COL4A6-209ENST00000545689 ZW10O43264 779 aa12.56□□□□□ -0.4
COL4A6-209ENST00000545689 ZMPSTE24O75844 475 aa12.56□□□□□ -0.4
COL4A6-209ENST00000545689 VAV1P15498 845 aa12.56□□□□□ -0.4
COL4A6-209ENST00000545689 TREML2Q5T2D2 321 aa12.56□□□□□ -0.4
COL4A6-209ENST00000545689 HECTD2Q5U5R9 776 aa12.56□□□□□ -0.4
COL4A6-209ENST00000545689 AMER2Q8N7J2 671 aa12.56□□□□□ -0.4
COL4A6-209ENST00000545689 SUSD6Q92537 303 aa12.56□□□□□ -0.4
COL4A6-209ENST00000545689 HDHD2Q9H0R4 259 aa12.56□□□□□ -0.4
COL4A6-209ENST00000545689 NXF3Q9H4D5 531 aaKnown RBP12.56□□□□□ -0.4
COL4A6-209ENST00000545689 DIABLOQ9NR28 239 aa12.56□□□□□ -0.4
COL4A6-209ENST00000545689 GRHL1Q9NZI5 618 aa12.56□□□□□ -0.4
COL4A6-209ENST00000545689 KPNA3O00505 521 aaPredicted RBP12.55□□□□□ -0.4
COL4A6-209ENST00000545689 WARSP23381 471 aaKnown RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms