RNA–Protein interactions for RNA: ENST00000545450.6

MSLN-202, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-202ENST00000545450 KCTD11Q693B1 232 aa18.92■□□□□ 0.62
MSLN-202ENST00000545450 KLHL35Q6PF15 583 aa18.92■□□□□ 0.62
MSLN-202ENST00000545450 POTEHQ6S545 545 aa18.92■□□□□ 0.62
MSLN-202ENST00000545450 TMEM173Q86WV6 379 aaPredicted RBP18.92■□□□□ 0.62
MSLN-202ENST00000545450 TP53INP2Q8IXH6 220 aa18.92■□□□□ 0.62
MSLN-202ENST00000545450 LRRC43Q8N309 656 aa18.92■□□□□ 0.62
MSLN-202ENST00000545450 DNAAF3Q8N9W5 541 aa18.92■□□□□ 0.62
MSLN-202ENST00000545450 KDM1BQ8NB78 822 aa18.92■□□□□ 0.62
MSLN-202ENST00000545450 TRPC4APQ8TEL6 797 aa18.92■□□□□ 0.62
MSLN-202ENST00000545450 VWCEQ96DN2 955 aa18.92■□□□□ 0.62
MSLN-202ENST00000545450 ANLNQ9NQW6 1124 aa18.92■□□□□ 0.62
MSLN-202ENST00000545450 ADA2Q9NZK5 511 aa18.92■□□□□ 0.62
MSLN-202ENST00000545450 KLHL8Q9P2G9 620 aaPredicted RBP18.92■□□□□ 0.62
MSLN-202ENST00000545450 TBX21Q9UL17 535 aa18.92■□□□□ 0.62
MSLN-202ENST00000545450 MYRFQ9Y2G1 1151 aa18.92■□□□□ 0.62
MSLN-202ENST00000545450 KIAA0100Q14667 2235 aaKnown RBP18.92■□□□□ 0.62
MSLN-202ENST00000545450 TNFRSF10BO14763 440 aa18.91■□□□□ 0.62
MSLN-202ENST00000545450 ALDH2P05091 517 aa18.91■□□□□ 0.62
MSLN-202ENST00000545450 PTPN3P26045 913 aa18.91■□□□□ 0.62
MSLN-202ENST00000545450 GRIK1P39086 918 aa18.91■□□□□ 0.62
MSLN-202ENST00000545450 SLC5A3P53794 718 aa18.91■□□□□ 0.62
MSLN-202ENST00000545450 DUS1LQ6P1R4 473 aaKnown RBP18.91■□□□□ 0.62
MSLN-202ENST00000545450 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.91■□□□□ 0.62
MSLN-202ENST00000545450 SCML4Q8N228 414 aa18.91■□□□□ 0.62
MSLN-202ENST00000545450 LRTOMTQ8WZ04 291 aa18.91■□□□□ 0.62
MSLN-202ENST00000545450 DUS3LQ96G46 650 aaKnown RBP18.91■□□□□ 0.62
MSLN-202ENST00000545450 PLEKHG4BQ96PX9 1271 aa18.91■□□□□ 0.62
MSLN-202ENST00000545450 UHRF1Q96T88 793 aaPredicted RBP18.91■□□□□ 0.62
MSLN-202ENST00000545450 IARS2Q9NSE4 1012 aaKnown RBP18.91■□□□□ 0.62
MSLN-202ENST00000545450 IPO11Q9UI26 975 aaKnown RBP18.91■□□□□ 0.62
MSLN-202ENST00000545450 ATP11BQ9Y2G3 1177 aa18.91■□□□□ 0.62
MSLN-202ENST00000545450 I6L893 689 aaPredicted RBP18.91■□□□□ 0.62
MSLN-202ENST00000545450 HOXA2O43364 376 aa18.91■□□□□ 0.62
MSLN-202ENST00000545450 MRPL58Q14197 206 aaKnown RBP18.91■□□□□ 0.62
MSLN-202ENST00000545450 CERCAMQ5T4B2 595 aa18.91■□□□□ 0.62
MSLN-202ENST00000545450 C1orf53Q5VUE5 145 aa18.91■□□□□ 0.62
MSLN-202ENST00000545450 LPCAT2Q7L5N7 544 aa18.91■□□□□ 0.62
MSLN-202ENST00000545450 FNDC8Q8TC99 324 aa18.91■□□□□ 0.62
MSLN-202ENST00000545450 GRIN3AQ8TCU5 1115 aa18.91■□□□□ 0.62
MSLN-202ENST00000545450 TSNARE1Q96NA8 513 aa18.91■□□□□ 0.62
MSLN-202ENST00000545450 SEMA6AQ9H2E6 1030 aa18.91■□□□□ 0.62
MSLN-202ENST00000545450 PNPLA3Q9NST1 481 aa18.91■□□□□ 0.62
MSLN-202ENST00000545450 SARDHQ9UL12 918 aa18.91■□□□□ 0.62
MSLN-202ENST00000545450 RUVBL2Q9Y230 463 aaKnown RBP18.91■□□□□ 0.62
MSLN-202ENST00000545450 ERI2A8K979 691 aaKnown RBP18.9■□□□□ 0.62
MSLN-202ENST00000545450 KCNU1A8MYU2 1149 aa18.9■□□□□ 0.62
MSLN-202ENST00000545450 DLX3O60479 287 aa18.9■□□□□ 0.62
MSLN-202ENST00000545450 PARNO95453 639 aaKnown RBP18.9■□□□□ 0.62
MSLN-202ENST00000545450 GALTP07902 379 aa18.9■□□□□ 0.62
MSLN-202ENST00000545450 DNAJB1P25685 340 aa18.9■□□□□ 0.62
MSLN-202ENST00000545450 NPY2RP49146 381 aa18.9■□□□□ 0.62
MSLN-202ENST00000545450 TRAP1Q12931 704 aaKnown RBP18.9■□□□□ 0.62
MSLN-202ENST00000545450 TMED1Q13445 227 aa18.9■□□□□ 0.62
MSLN-202ENST00000545450 CTXN3Q4LDR2 81 aa18.9■□□□□ 0.62
MSLN-202ENST00000545450 ACBD5Q5T8D3 534 aaPredicted RBP18.9■□□□□ 0.62
MSLN-202ENST00000545450 ZC3HC1Q86WB0 502 aaKnown RBP18.9■□□□□ 0.62
MSLN-202ENST00000545450 CROCCP3Q8IVE0 287 aa18.9■□□□□ 0.62
MSLN-202ENST00000545450 DCP1BQ8IZD4 617 aaKnown RBP18.9■□□□□ 0.62
MSLN-202ENST00000545450 PELI3Q8N2H9 469 aa18.9■□□□□ 0.62
MSLN-202ENST00000545450 BBS5Q8N3I7 341 aa18.9■□□□□ 0.62
MSLN-202ENST00000545450 FSTL5Q8N475 847 aaPredicted RBP18.9■□□□□ 0.62
MSLN-202ENST00000545450 HM13Q8TCT9 377 aa18.9■□□□□ 0.62
MSLN-202ENST00000545450 SLCO4A1Q96BD0 722 aa18.9■□□□□ 0.62
MSLN-202ENST00000545450 PGAP3Q96FM1 320 aaPredicted RBP18.9■□□□□ 0.62
MSLN-202ENST00000545450 TMEM79Q9BSE2 394 aa18.9■□□□□ 0.62
MSLN-202ENST00000545450 COLEC11Q9BWP8 271 aa18.9■□□□□ 0.62
MSLN-202ENST00000545450 MRPL9Q9BYD2 267 aaKnown RBP18.9■□□□□ 0.62
MSLN-202ENST00000545450 DDIT4Q9NX09 232 aa18.9■□□□□ 0.62
MSLN-202ENST00000545450 PLXNA3P51805 1871 aa18.9■□□□□ 0.62
MSLN-202ENST00000545450 COL4A6Q14031 1691 aa18.9■□□□□ 0.62
MSLN-202ENST00000545450 E7ENX8 843 aa18.89■□□□□ 0.62
MSLN-202ENST00000545450 SDHDO14521 159 aa18.89■□□□□ 0.62
MSLN-202ENST00000545450 DCLK1O15075 740 aa18.89■□□□□ 0.62
MSLN-202ENST00000545450 TRIM24O15164 1050 aa18.89■□□□□ 0.62
MSLN-202ENST00000545450 ZNF189O75820 626 aaPredicted RBP18.89■□□□□ 0.62
MSLN-202ENST00000545450 CSPG5O95196 566 aa18.89■□□□□ 0.62
MSLN-202ENST00000545450 SLC35E2BP0CK96 405 aa18.89■□□□□ 0.62
MSLN-202ENST00000545450 COL6A2P12110 1019 aa18.89■□□□□ 0.62
MSLN-202ENST00000545450 FGFR3P22607 806 aa18.89■□□□□ 0.62
MSLN-202ENST00000545450 GLRBP48167 497 aa18.89■□□□□ 0.62
MSLN-202ENST00000545450 PGFP49763 221 aa18.89■□□□□ 0.62
MSLN-202ENST00000545450 FUT10Q6P4F1 479 aa18.89■□□□□ 0.62
MSLN-202ENST00000545450 SCN4BQ8IWT1 228 aa18.89■□□□□ 0.62
MSLN-202ENST00000545450 BCL7CQ8WUZ0 217 aaPredicted RBP18.89■□□□□ 0.62
MSLN-202ENST00000545450 KCTD4Q8WVF5 259 aa18.89■□□□□ 0.62
MSLN-202ENST00000545450 ABTB1Q969K4 478 aaPredicted RBP18.89■□□□□ 0.62
MSLN-202ENST00000545450 SCYL1Q96KG9 808 aa18.89■□□□□ 0.62
MSLN-202ENST00000545450 PHF12Q96QT6 1004 aa18.89■□□□□ 0.62
MSLN-202ENST00000545450 SLC29A1Q99808 456 aa18.89■□□□□ 0.62
MSLN-202ENST00000545450 PCDHAC1Q9H158 963 aa18.89■□□□□ 0.62
MSLN-202ENST00000545450 RHOJQ9H4E5 214 aa18.89■□□□□ 0.62
MSLN-202ENST00000545450 CAAP1Q9H8G2 361 aa18.89■□□□□ 0.62
MSLN-202ENST00000545450 LIN28AQ9H9Z2 209 aaKnown RBP18.89■□□□□ 0.62
MSLN-202ENST00000545450 CHRAC1Q9NRG0 131 aa18.89■□□□□ 0.62
MSLN-202ENST00000545450 LTBP2Q14767 1821 aa18.89■□□□□ 0.61
MSLN-202ENST00000545450 TCRBV3S1A0A5B6 114 aa18.89■□□□□ 0.61
MSLN-202ENST00000545450 TRPC5OSA6NMA1 111 aa18.89■□□□□ 0.61
MSLN-202ENST00000545450 PHGDHO43175 533 aaKnown RBP18.89■□□□□ 0.61
MSLN-202ENST00000545450 SLC7A1P30825 629 aa18.89■□□□□ 0.61
MSLN-202ENST00000545450 GPR15P49685 360 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms