RNA–Protein interactions for RNA: ENST00000545425.2

FOXA1-202, Transcript of forkhead box A1, humanhuman

TSL 2

Gene FOXA1, Length 1,806 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-202ENST00000545425 CCSAPQ6IQ19 270 aaPredicted RBP23.36■■□□□ 1.33
FOXA1-202ENST00000545425 UGT2A3Q6UWM9 527 aa23.36■■□□□ 1.33
FOXA1-202ENST00000545425 LRRTM3Q86VH5 581 aa23.36■■□□□ 1.33
FOXA1-202ENST00000545425 HIPK4Q8NE63 616 aa23.36■■□□□ 1.33
FOXA1-202ENST00000545425 SCAMP5Q8TAC9 235 aa23.36■■□□□ 1.33
FOXA1-202ENST00000545425 TADA1Q96BN2 335 aa23.36■■□□□ 1.33
FOXA1-202ENST00000545425 SLC25A23Q9BV35 468 aa23.36■■□□□ 1.33
FOXA1-202ENST00000545425 ZYG11BQ9C0D3 744 aa23.36■■□□□ 1.33
FOXA1-202ENST00000545425 PRDM5Q9NQX1 630 aaPredicted RBP23.36■■□□□ 1.33
FOXA1-202ENST00000545425 GTSE1Q9NYZ3 720 aa23.36■■□□□ 1.33
FOXA1-202ENST00000545425 SLC2A6Q9UGQ3 507 aa23.36■■□□□ 1.33
FOXA1-202ENST00000545425 MROH6A6NGR9 719 aa23.36■■□□□ 1.33
FOXA1-202ENST00000545425 TMEM189-UBE2V1I3L0A0 370 aa23.36■■□□□ 1.33
FOXA1-202ENST00000545425 ACOT8O14734 319 aa23.36■■□□□ 1.33
FOXA1-202ENST00000545425 SORBS2O94875 1100 aaKnown RBP23.36■■□□□ 1.33
FOXA1-202ENST00000545425 PEX11BO96011 259 aa23.36■■□□□ 1.33
FOXA1-202ENST00000545425 XRCC1P18887 633 aaPredicted RBP23.36■■□□□ 1.33
FOXA1-202ENST00000545425 IMPDH1P20839 514 aa23.36■■□□□ 1.33
FOXA1-202ENST00000545425 BRCC3P46736 316 aa23.36■■□□□ 1.33
FOXA1-202ENST00000545425 YWHAHQ04917 246 aaPredicted RBP23.36■■□□□ 1.33
FOXA1-202ENST00000545425 PTK2BQ14289 1009 aa23.36■■□□□ 1.33
FOXA1-202ENST00000545425 HABP4Q5JVS0 413 aaKnown RBP23.36■■□□□ 1.33
FOXA1-202ENST00000545425 RASIP1Q5U651 963 aa23.36■■□□□ 1.33
FOXA1-202ENST00000545425 AHI1Q8N157 1196 aa23.36■■□□□ 1.33
FOXA1-202ENST00000545425 ATP6V0D2Q8N8Y2 350 aa23.36■■□□□ 1.33
FOXA1-202ENST00000545425 SPPL2BQ8TCT7 592 aa23.36■■□□□ 1.33
FOXA1-202ENST00000545425 ZFRQ96KR1 1074 aaKnown RBP23.36■■□□□ 1.33
FOXA1-202ENST00000545425 PAAF1Q9BRP4 392 aa23.36■■□□□ 1.33
FOXA1-202ENST00000545425 OLA1Q9NTK5 396 aaKnown RBP23.36■■□□□ 1.33
FOXA1-202ENST00000545425 PADI3Q9ULW8 664 aa23.36■■□□□ 1.33
FOXA1-202ENST00000545425 VWA7Q9Y334 891 aa23.36■■□□□ 1.33
FOXA1-202ENST00000545425 IGLV3-10A0A075B6K4 115 aa23.35■■□□□ 1.33
FOXA1-202ENST00000545425 A0A1W2PQ45 241 aaPredicted RBP23.35■■□□□ 1.33
FOXA1-202ENST00000545425 A0A1W2PQY0 241 aa23.35■■□□□ 1.33
FOXA1-202ENST00000545425 A8MT66 165 aa23.35■■□□□ 1.33
FOXA1-202ENST00000545425 BBIP1A8MTZ0 92 aa23.35■■□□□ 1.33
FOXA1-202ENST00000545425 UBDO15205 165 aa23.35■■□□□ 1.33
FOXA1-202ENST00000545425 WISP3O95389 354 aaPredicted RBP23.35■■□□□ 1.33
FOXA1-202ENST00000545425 C8BP07358 591 aa23.35■■□□□ 1.33
FOXA1-202ENST00000545425 CSHL1Q14406 222 aa23.35■■□□□ 1.33
FOXA1-202ENST00000545425 ADRM1Q16186 407 aa23.35■■□□□ 1.33
FOXA1-202ENST00000545425 SPATS1Q496A3 300 aa23.35■■□□□ 1.33
FOXA1-202ENST00000545425 HECTD2Q5U5R9 776 aa23.35■■□□□ 1.33
FOXA1-202ENST00000545425 CILP2Q8IUL8 1156 aa23.35■■□□□ 1.33
FOXA1-202ENST00000545425 ZNF419Q96HQ0 510 aaPredicted RBP23.35■■□□□ 1.33
FOXA1-202ENST00000545425 PADI4Q9UM07 663 aa23.35■■□□□ 1.33
FOXA1-202ENST00000545425 PLXNA3P51805 1871 aa23.34■■□□□ 1.33
FOXA1-202ENST00000545425 ERFP50548 548 aa23.34■■□□□ 1.33
FOXA1-202ENST00000545425 PSME3P61289 254 aa23.34■■□□□ 1.33
FOXA1-202ENST00000545425 ACVR1Q04771 509 aa23.34■■□□□ 1.33
FOXA1-202ENST00000545425 CUZD1Q86UP6 607 aa23.34■■□□□ 1.33
FOXA1-202ENST00000545425 ZNF683Q8IZ20 524 aa23.34■■□□□ 1.33
FOXA1-202ENST00000545425 PHC3Q8NDX5 983 aa23.34■■□□□ 1.33
FOXA1-202ENST00000545425 BHLHE22Q8NFJ8 381 aaPredicted RBP23.34■■□□□ 1.33
FOXA1-202ENST00000545425 GPR150Q8NGU9 434 aa23.34■■□□□ 1.33
FOXA1-202ENST00000545425 GLT1D1Q96MS3 346 aa23.34■■□□□ 1.33
FOXA1-202ENST00000545425 PRKAG2Q9UGJ0 569 aa23.34■■□□□ 1.33
FOXA1-202ENST00000545425 ATP11BQ9Y2G3 1177 aa23.34■■□□□ 1.33
FOXA1-202ENST00000545425 NYNRINQ9P2P1 1898 aaKnown RBP23.34■■□□□ 1.33
FOXA1-202ENST00000545425 PSMD12O00232 456 aaPredicted RBP23.33■■□□□ 1.33
FOXA1-202ENST00000545425 GPC4O75487 556 aa23.33■■□□□ 1.33
FOXA1-202ENST00000545425 EPOP01588 193 aa23.33■■□□□ 1.33
FOXA1-202ENST00000545425 MAGEA11P43364 429 aa23.33■■□□□ 1.33
FOXA1-202ENST00000545425 TRIM25Q14258 630 aaKnown RBP23.33■■□□□ 1.33
FOXA1-202ENST00000545425 RBBP5Q15291 538 aaKnown RBP23.33■■□□□ 1.33
FOXA1-202ENST00000545425 LRRC36Q1X8D7 754 aa23.33■■□□□ 1.33
FOXA1-202ENST00000545425 CNSTQ6PJW8 725 aa23.33■■□□□ 1.33
FOXA1-202ENST00000545425 NUP93Q8N1F7 819 aa23.33■■□□□ 1.33
FOXA1-202ENST00000545425 ZCWPW1Q9H0M4 648 aa23.33■■□□□ 1.33
FOXA1-202ENST00000545425 AGO3Q9H9G7 860 aaKnown RBP23.33■■□□□ 1.33
FOXA1-202ENST00000545425 STARD7Q9NQZ5 370 aa23.33■■□□□ 1.33
FOXA1-202ENST00000545425 COMMD8Q9NX08 183 aa23.33■■□□□ 1.33
FOXA1-202ENST00000545425 SFMBT1Q9UHJ3 866 aa23.33■■□□□ 1.33
FOXA1-202ENST00000545425 CCDC78A2IDD5 438 aa23.33■■□□□ 1.32
FOXA1-202ENST00000545425 MYADML2A6NDP7 307 aa23.33■■□□□ 1.32
FOXA1-202ENST00000545425 OAZ2O95190 189 aa23.33■■□□□ 1.32
FOXA1-202ENST00000545425 STAMBPO95630 424 aa23.33■■□□□ 1.32
FOXA1-202ENST00000545425 POMCP01189 267 aa23.33■■□□□ 1.32
FOXA1-202ENST00000545425 F7P08709 466 aaPredicted RBP23.33■■□□□ 1.32
FOXA1-202ENST00000545425 CTSHP09668 335 aa23.33■■□□□ 1.32
FOXA1-202ENST00000545425 SYN1P17600 705 aa23.33■■□□□ 1.32
FOXA1-202ENST00000545425 CCR10P46092 362 aa23.33■■□□□ 1.32
FOXA1-202ENST00000545425 TBX4P57082 545 aa23.33■■□□□ 1.32
FOXA1-202ENST00000545425 YBEYP58557 167 aaPredicted RBP23.33■■□□□ 1.32
FOXA1-202ENST00000545425 CREB5Q02930 508 aa23.33■■□□□ 1.32
FOXA1-202ENST00000545425 IL10RBQ08334 325 aa23.33■■□□□ 1.32
FOXA1-202ENST00000545425 PARP15Q460N3 678 aa23.33■■□□□ 1.32
FOXA1-202ENST00000545425 FAM26DQ5JW98 314 aa23.33■■□□□ 1.32
FOXA1-202ENST00000545425 TMEM198Q66K66 360 aa23.33■■□□□ 1.32
FOXA1-202ENST00000545425 ROPN1LQ96C74 230 aa23.33■■□□□ 1.32
FOXA1-202ENST00000545425 CYP2S1Q96SQ9 504 aa23.33■■□□□ 1.32
FOXA1-202ENST00000545425 EFHD1Q9BUP0 239 aa23.33■■□□□ 1.32
FOXA1-202ENST00000545425 NOL6Q9H6R4 1146 aaKnown RBP23.33■■□□□ 1.32
FOXA1-202ENST00000545425 SP110Q9HB58 689 aa23.33■■□□□ 1.32
FOXA1-202ENST00000545425 C15orf38-AP3S2A0A0A6YYH1 394 aa23.32■■□□□ 1.32
FOXA1-202ENST00000545425 TNFAIP8O95379 198 aa23.32■■□□□ 1.32
FOXA1-202ENST00000545425 ASGR1P07306 291 aa23.32■■□□□ 1.32
FOXA1-202ENST00000545425 SNRPB2P08579 225 aaKnown RBP23.32■■□□□ 1.32
FOXA1-202ENST00000545425 CCDC166P0CW27 439 aa23.32■■□□□ 1.32
FOXA1-202ENST00000545425 HLA-DPA1P20036 260 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms