RNA–Protein interactions for RNA: ENST00000545228.2

TSEN54-203, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 5

Gene TSEN54, Length 1,139 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-203ENST00000545228 TBC1D3FA6NER0 549 aaPredicted RBP13.93□□□□□ -0.18
TSEN54-203ENST00000545228 MEI4A8MW99 385 aa13.93□□□□□ -0.18
TSEN54-203ENST00000545228 TBC1D3LB9A6J9 549 aa13.93□□□□□ -0.18
TSEN54-203ENST00000545228 TRAFD1O14545 582 aaPredicted RBP13.93□□□□□ -0.18
TSEN54-203ENST00000545228 ZNF500O60304 480 aaPredicted RBP13.93□□□□□ -0.18
TSEN54-203ENST00000545228 PCDH8O95206 1070 aa13.93□□□□□ -0.18
TSEN54-203ENST00000545228 NDST3O95803 873 aa13.93□□□□□ -0.18
TSEN54-203ENST00000545228 FGF1P05230 155 aa13.93□□□□□ -0.18
TSEN54-203ENST00000545228 TBC1D3HP0C7X1 549 aa13.93□□□□□ -0.18
TSEN54-203ENST00000545228 PSMB4P28070 264 aa13.93□□□□□ -0.18
TSEN54-203ENST00000545228 GKP32189 559 aa13.93□□□□□ -0.18
TSEN54-203ENST00000545228 RPS21P63220 83 aaKnown RBP13.93□□□□□ -0.18
TSEN54-203ENST00000545228 SKOR1P84550 965 aa13.93□□□□□ -0.18
TSEN54-203ENST00000545228 CDK16Q00536 496 aa13.93□□□□□ -0.18
TSEN54-203ENST00000545228 TRAF2Q12933 501 aa13.93□□□□□ -0.18
TSEN54-203ENST00000545228 LAMB3Q13751 1172 aa13.93□□□□□ -0.18
TSEN54-203ENST00000545228 POM121L1PQ3SYA9 428 aa13.93□□□□□ -0.18
TSEN54-203ENST00000545228 SETMARQ53H47 684 aaPredicted RBP13.93□□□□□ -0.18
TSEN54-203ENST00000545228 PIP5KL1Q5T9C9 394 aa13.93□□□□□ -0.18
TSEN54-203ENST00000545228 N4BP2L1Q5TBK1 243 aaPredicted RBP13.93□□□□□ -0.18
TSEN54-203ENST00000545228 TBC1D3GQ6DHY5 549 aa13.93□□□□□ -0.18
TSEN54-203ENST00000545228 TBC1D3CQ6IPX1 549 aa13.93□□□□□ -0.18
TSEN54-203ENST00000545228 B4GALNT4Q76KP1 1039 aa13.93□□□□□ -0.18
TSEN54-203ENST00000545228 PCGF5Q86SE9 256 aa13.93□□□□□ -0.18
TSEN54-203ENST00000545228 FAM124AQ86V42 546 aa13.93□□□□□ -0.18
TSEN54-203ENST00000545228 TBC1D3Q8IZP1 549 aaPredicted RBP13.93□□□□□ -0.18
TSEN54-203ENST00000545228 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.93□□□□□ -0.18
TSEN54-203ENST00000545228 CEP112Q8N8E3 955 aa13.93□□□□□ -0.18
TSEN54-203ENST00000545228 LRRN4Q8WUT4 740 aa13.93□□□□□ -0.18
TSEN54-203ENST00000545228 ARRDC3Q96B67 414 aa13.93□□□□□ -0.18
TSEN54-203ENST00000545228 DUSP15Q9H1R2 295 aaPredicted RBP13.93□□□□□ -0.18
TSEN54-203ENST00000545228 SLC6A17Q9H1V8 727 aa13.93□□□□□ -0.18
TSEN54-203ENST00000545228 NEUROG2Q9H2A3 272 aa13.93□□□□□ -0.18
TSEN54-203ENST00000545228 SMOC1Q9H4F8 434 aa13.93□□□□□ -0.18
TSEN54-203ENST00000545228 TRABDQ9H4I3 376 aa13.93□□□□□ -0.18
TSEN54-203ENST00000545228 SUSD2Q9UGT4 822 aa13.93□□□□□ -0.18
TSEN54-203ENST00000545228 SMAPO00193 183 aa13.92□□□□□ -0.18
TSEN54-203ENST00000545228 PSMD11O00231 422 aa13.92□□□□□ -0.18
TSEN54-203ENST00000545228 PMPCBO75439 489 aa13.92□□□□□ -0.18
TSEN54-203ENST00000545228 KRT14P02533 472 aa13.92□□□□□ -0.18
TSEN54-203ENST00000545228 PMLP29590 882 aa13.92□□□□□ -0.18
TSEN54-203ENST00000545228 CD68P34810 354 aaPredicted RBP13.92□□□□□ -0.18
TSEN54-203ENST00000545228 HOXD12P35452 270 aa13.92□□□□□ -0.18
TSEN54-203ENST00000545228 CCR5P51681 352 aa13.92□□□□□ -0.18
TSEN54-203ENST00000545228 BASP1P80723 227 aaKnown RBP13.92□□□□□ -0.18
TSEN54-203ENST00000545228 PDE1BQ01064 536 aa13.92□□□□□ -0.18
TSEN54-203ENST00000545228 DR1Q01658 176 aa13.92□□□□□ -0.18
TSEN54-203ENST00000545228 CREB5Q02930 508 aa13.92□□□□□ -0.18
TSEN54-203ENST00000545228 NIPAL4Q0D2K0 466 aa13.92□□□□□ -0.18
TSEN54-203ENST00000545228 PCSK7Q16549 785 aa13.92□□□□□ -0.18
TSEN54-203ENST00000545228 ZNF572Q7Z3I7 529 aaPredicted RBP13.92□□□□□ -0.18
TSEN54-203ENST00000545228 PRPF39Q86UA1 669 aaKnown RBP13.92□□□□□ -0.18
TSEN54-203ENST00000545228 TRIM69Q86WT6 500 aa13.92□□□□□ -0.18
TSEN54-203ENST00000545228 SPATA4Q8NEY3 305 aa13.92□□□□□ -0.18
TSEN54-203ENST00000545228 IPMKQ8NFU5 416 aa13.92□□□□□ -0.18
TSEN54-203ENST00000545228 FAM174AQ8TBP5 190 aa13.92□□□□□ -0.18
TSEN54-203ENST00000545228 SKA1Q96BD8 255 aa13.92□□□□□ -0.18
TSEN54-203ENST00000545228 TADA1Q96BN2 335 aa13.92□□□□□ -0.18
TSEN54-203ENST00000545228 SCRN2Q96FV2 425 aa13.92□□□□□ -0.18
TSEN54-203ENST00000545228 ZNF419Q96HQ0 510 aaPredicted RBP13.92□□□□□ -0.18
TSEN54-203ENST00000545228 MLPHQ9BV36 600 aaPredicted RBP13.92□□□□□ -0.18
TSEN54-203ENST00000545228 GPR174Q9BXC1 333 aa13.92□□□□□ -0.18
TSEN54-203ENST00000545228 EIF2B3Q9NR50 452 aaKnown RBP13.92□□□□□ -0.18
TSEN54-203ENST00000545228 RAB6BQ9NRW1 208 aa13.92□□□□□ -0.18
TSEN54-203ENST00000545228 RAD18Q9NS91 495 aa13.92□□□□□ -0.18
TSEN54-203ENST00000545228 DMTF1Q9Y222 760 aa13.92□□□□□ -0.18
TSEN54-203ENST00000545228 PPIL1Q9Y3C6 166 aa13.92□□□□□ -0.18
TSEN54-203ENST00000545228 CACNA1BQ00975 2339 aa13.91□□□□□ -0.18
TSEN54-203ENST00000545228 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.91□□□□□ -0.18
TSEN54-203ENST00000545228 A0A0J9YYE9 177 aa13.91□□□□□ -0.18
TSEN54-203ENST00000545228 CTAGE15A4D2H0 777 aa13.91□□□□□ -0.18
TSEN54-203ENST00000545228 CAPN8A6NHC0 703 aa13.91□□□□□ -0.18
TSEN54-203ENST00000545228 FAM47DPA6NHR8 397 aa13.91□□□□□ -0.18
TSEN54-203ENST00000545228 ANKRD66B4E2M5 251 aa13.91□□□□□ -0.18
TSEN54-203ENST00000545228 FZD6O60353 706 aa13.91□□□□□ -0.18
TSEN54-203ENST00000545228 RNGTTO60942 597 aaKnown RBP13.91□□□□□ -0.18
TSEN54-203ENST00000545228 KCNK5O95279 499 aa13.91□□□□□ -0.18
TSEN54-203ENST00000545228 AP2A1O95782 977 aa13.91□□□□□ -0.18
TSEN54-203ENST00000545228 MT-CYBP00156 380 aaPredicted RBP13.91□□□□□ -0.18
TSEN54-203ENST00000545228 TRBC1P01850 177 aa13.91□□□□□ -0.18
TSEN54-203ENST00000545228 MMP2P08253 660 aa13.91□□□□□ -0.18
TSEN54-203ENST00000545228 ELFN1P0C7U0 828 aa13.91□□□□□ -0.18
TSEN54-203ENST00000545228 CTAGE8P0CG41 777 aa13.91□□□□□ -0.18
TSEN54-203ENST00000545228 GNSP15586 552 aa13.91□□□□□ -0.18
TSEN54-203ENST00000545228 VIPR1P32241 457 aa13.91□□□□□ -0.18
TSEN54-203ENST00000545228 MMP12P39900 470 aa13.91□□□□□ -0.18
TSEN54-203ENST00000545228 KCNJ1P48048 391 aa13.91□□□□□ -0.18
TSEN54-203ENST00000545228 GDF10P55107 478 aa13.91□□□□□ -0.18
TSEN54-203ENST00000545228 WNT3AP56704 352 aa13.91□□□□□ -0.18
TSEN54-203ENST00000545228 FAM193AP78312 1265 aa13.91□□□□□ -0.18
TSEN54-203ENST00000545228 SGCGQ13326 291 aa13.91□□□□□ -0.18
TSEN54-203ENST00000545228 SEMA5AQ13591 1074 aa13.91□□□□□ -0.18
TSEN54-203ENST00000545228 PMS2CLQ68D20 193 aa13.91□□□□□ -0.18
TSEN54-203ENST00000545228 KIAA0895LQ68EN5 471 aa13.91□□□□□ -0.18
TSEN54-203ENST00000545228 TCEAL6Q6IPX3 200 aa13.91□□□□□ -0.18
TSEN54-203ENST00000545228 DPPA4Q7L190 304 aa13.91□□□□□ -0.18
TSEN54-203ENST00000545228 CTAGE6Q86UF2 777 aa13.91□□□□□ -0.18
TSEN54-203ENST00000545228 CTAGE4Q8IX94 777 aa13.91□□□□□ -0.18
TSEN54-203ENST00000545228 BBOF1Q8ND07 529 aa13.91□□□□□ -0.18
TSEN54-203ENST00000545228 LPCAT1Q8NF37 534 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms