RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 PMPCBO75439 489 aa15.16■□□□□ 0.02
CD9-210ENST00000543916 ZNF189O75820 626 aaPredicted RBP15.16■□□□□ 0.02
CD9-210ENST00000543916 CFIP05156 583 aa15.16■□□□□ 0.02
CD9-210ENST00000543916 ZNF806P0C7X5 589 aa15.16■□□□□ 0.02
CD9-210ENST00000543916 C6P13671 934 aa15.16■□□□□ 0.02
CD9-210ENST00000543916 LHCGRP22888 699 aa15.16■□□□□ 0.02
CD9-210ENST00000543916 PSMB4P28070 264 aa15.16■□□□□ 0.02
CD9-210ENST00000543916 LIG3P49916 1009 aa15.16■□□□□ 0.02
CD9-210ENST00000543916 EPHB1P54762 984 aa15.16■□□□□ 0.02
CD9-210ENST00000543916 GALNT3Q14435 633 aa15.16■□□□□ 0.02
CD9-210ENST00000543916 CSRP2Q16527 193 aa15.16■□□□□ 0.02
CD9-210ENST00000543916 DUOXA1Q1HG43 343 aa15.16■□□□□ 0.02
CD9-210ENST00000543916 PAPD7Q5XG87 772 aaKnown RBP15.16■□□□□ 0.02
CD9-210ENST00000543916 ITPRIPL1Q6GPH6 555 aa15.16■□□□□ 0.02
CD9-210ENST00000543916 LAYNQ6UX15 382 aa15.16■□□□□ 0.02
CD9-210ENST00000543916 ALYREFQ86V81 257 aaKnown RBP15.16■□□□□ 0.02
CD9-210ENST00000543916 RTP4Q96DX8 246 aa15.16■□□□□ 0.02
CD9-210ENST00000543916 SCRN2Q96FV2 425 aa15.16■□□□□ 0.02
CD9-210ENST00000543916 SERAC1Q96JX3 654 aa15.16■□□□□ 0.02
CD9-210ENST00000543916 C1QTNF2Q9BXJ5 285 aa15.16■□□□□ 0.02
CD9-210ENST00000543916 FSCN3Q9NQT6 498 aa15.16■□□□□ 0.02
CD9-210ENST00000543916 SUSD2Q9UGT4 822 aa15.16■□□□□ 0.02
CD9-210ENST00000543916 FAM153AQ9UHL3 310 aa15.16■□□□□ 0.02
CD9-210ENST00000543916 ZNF148Q9UQR1 794 aa15.16■□□□□ 0.02
CD9-210ENST00000543916 DMTF1Q9Y222 760 aa15.16■□□□□ 0.02
CD9-210ENST00000543916 CA5BQ9Y2D0 317 aa15.16■□□□□ 0.02
CD9-210ENST00000543916 ZNF292O60281 2723 aa15.16■□□□□ 0.02
CD9-210ENST00000543916 LAMA1P25391 3075 aa15.16■□□□□ 0.02
CD9-210ENST00000543916 TMEM131Q92545 1883 aa15.16■□□□□ 0.02
CD9-210ENST00000543916 A0A0J9YYE9 177 aa15.15■□□□□ 0.02
CD9-210ENST00000543916 CAPN8A6NHC0 703 aa15.15■□□□□ 0.02
CD9-210ENST00000543916 RAD51BO15315 384 aa15.15■□□□□ 0.02
CD9-210ENST00000543916 GCATO75600 419 aa15.15■□□□□ 0.02
CD9-210ENST00000543916 PAK4O96013 591 aaPredicted RBP15.15■□□□□ 0.02
CD9-210ENST00000543916 TRBC1P01850 177 aa15.15■□□□□ 0.02
CD9-210ENST00000543916 ITGAVP06756 1048 aa15.15■□□□□ 0.02
CD9-210ENST00000543916 GNSP15586 552 aa15.15■□□□□ 0.02
CD9-210ENST00000543916 GM2AP17900 193 aa15.15■□□□□ 0.02
CD9-210ENST00000543916 TCP1P17987 556 aaKnown RBP15.15■□□□□ 0.02
CD9-210ENST00000543916 VIPR1P32241 457 aa15.15■□□□□ 0.02
CD9-210ENST00000543916 HNF1BP35680 557 aa15.15■□□□□ 0.02
CD9-210ENST00000543916 NUDT1P36639 197 aa15.15■□□□□ 0.02
CD9-210ENST00000543916 WNT3AP56704 352 aa15.15■□□□□ 0.02
CD9-210ENST00000543916 RPL26P61254 145 aaKnown RBP15.15■□□□□ 0.02
CD9-210ENST00000543916 CDK18Q07002 472 aa15.15■□□□□ 0.02
CD9-210ENST00000543916 CNGA3Q16281 694 aa15.15■□□□□ 0.02
CD9-210ENST00000543916 QPCTQ16769 361 aa15.15■□□□□ 0.02
CD9-210ENST00000543916 TRIM61Q5EBN2 209 aa15.15■□□□□ 0.02
CD9-210ENST00000543916 NAPEPLDQ6IQ20 393 aa15.15■□□□□ 0.02
CD9-210ENST00000543916 DRICH1Q6PGQ1 229 aaPredicted RBP15.15■□□□□ 0.02
CD9-210ENST00000543916 SLC23A3Q6PIS1 610 aa15.15■□□□□ 0.02
CD9-210ENST00000543916 LIPIQ6XZB0 460 aa15.15■□□□□ 0.02
CD9-210ENST00000543916 USP45Q70EL2 814 aa15.15■□□□□ 0.02
CD9-210ENST00000543916 TSPAN33Q86UF1 283 aa15.15■□□□□ 0.02
CD9-210ENST00000543916 ZSCAN30Q86W11 494 aa15.15■□□□□ 0.02
CD9-210ENST00000543916 CEP76Q8TAP6 659 aa15.15■□□□□ 0.02
CD9-210ENST00000543916 ACTRT1Q8TDG2 376 aa15.15■□□□□ 0.02
CD9-210ENST00000543916 MRGPRX2Q96LB1 330 aa15.15■□□□□ 0.02
CD9-210ENST00000543916 KLF6Q99612 283 aaPredicted RBP15.15■□□□□ 0.02
CD9-210ENST00000543916 MLPHQ9BV36 600 aaPredicted RBP15.15■□□□□ 0.02
CD9-210ENST00000543916 AP1M1Q9BXS5 423 aa15.15■□□□□ 0.02
CD9-210ENST00000543916 CAPN10Q9HC96 672 aa15.15■□□□□ 0.02
CD9-210ENST00000543916 RPL26L1Q9UNX3 145 aaKnown RBP15.15■□□□□ 0.02
CD9-210ENST00000543916 SDK1Q7Z5N4 2213 aa15.15■□□□□ 0.02
CD9-210ENST00000543916 A0A1W2PR77 199 aa15.14■□□□□ 0.01
CD9-210ENST00000543916 CTAGE9A4FU28 777 aa15.14■□□□□ 0.01
CD9-210ENST00000543916 PRAMEF26H0Y7S4 382 aa15.14■□□□□ 0.01
CD9-210ENST00000543916 TM7SF2O76062 418 aa15.14■□□□□ 0.01
CD9-210ENST00000543916 HEXIM1O94992 359 aaKnown RBP15.14■□□□□ 0.01
CD9-210ENST00000543916 METTL18O95568 372 aa15.14■□□□□ 0.01
CD9-210ENST00000543916 WNT1P04628 370 aa15.14■□□□□ 0.01
CD9-210ENST00000543916 ELFN1P0C7U0 828 aa15.14■□□□□ 0.01
CD9-210ENST00000543916 HNRNPA2B1P22626 353 aaKnown RBP15.14■□□□□ 0.01
CD9-210ENST00000543916 KCNJ1P48048 391 aa15.14■□□□□ 0.01
CD9-210ENST00000543916 GRIA4P48058 902 aa15.14■□□□□ 0.01
CD9-210ENST00000543916 CSNK1EP49674 416 aaKnown RBP15.14■□□□□ 0.01
CD9-210ENST00000543916 AFF3P51826 1226 aaKnown RBP15.14■□□□□ 0.01
CD9-210ENST00000543916 GEMP55040 296 aa15.14■□□□□ 0.01
CD9-210ENST00000543916 RACK1P63244 317 aaKnown RBP15.14■□□□□ 0.01
CD9-210ENST00000543916 IRX4P78413 519 aa15.14■□□□□ 0.01
CD9-210ENST00000543916 BNC1Q01954 994 aa15.14■□□□□ 0.01
CD9-210ENST00000543916 SGCGQ13326 291 aa15.14■□□□□ 0.01
CD9-210ENST00000543916 HS1BP3Q53T59 392 aa15.14■□□□□ 0.01
CD9-210ENST00000543916 TTC27Q6P3X3 843 aa15.14■□□□□ 0.01
CD9-210ENST00000543916 CRTC1Q6UUV9 634 aa15.14■□□□□ 0.01
CD9-210ENST00000543916 GCNT7Q6ZNI0 430 aa15.14■□□□□ 0.01
CD9-210ENST00000543916 PRR23CQ6ZRP0 262 aa15.14■□□□□ 0.01
CD9-210ENST00000543916 ARHGEF18Q6ZSZ5 1173 aa15.14■□□□□ 0.01
CD9-210ENST00000543916 RABEPKQ7Z6M1 372 aa15.14■□□□□ 0.01
CD9-210ENST00000543916 PRUNE1Q86TP1 453 aa15.14■□□□□ 0.01
CD9-210ENST00000543916 GLIS1Q8NBF1 620 aa15.14■□□□□ 0.01
CD9-210ENST00000543916 TMEM145Q8NBT3 493 aa15.14■□□□□ 0.01
CD9-210ENST00000543916 IPMKQ8NFU5 416 aa15.14■□□□□ 0.01
CD9-210ENST00000543916 ASB12Q8WXK4 309 aa15.14■□□□□ 0.01
CD9-210ENST00000543916 IFT43Q96FT9 208 aa15.14■□□□□ 0.01
CD9-210ENST00000543916 ADGRE3Q9BY15 652 aa15.14■□□□□ 0.01
CD9-210ENST00000543916 AASDHPPTQ9NRN7 309 aa15.14■□□□□ 0.01
CD9-210ENST00000543916 RXFP3Q9NSD7 469 aa15.14■□□□□ 0.01
CD9-210ENST00000543916 SLC6A14Q9UN76 642 aa15.14■□□□□ 0.01
CD9-210ENST00000543916 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms