RNA–Protein interactions for RNA: ENST00000543525.3

PPME1-208, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 1 (best)

Gene PPME1, Length 1,928 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-208ENST00000543525 OR6P1Q8NGX9 317 aa13.54□□□□□ -0.24
PPME1-208ENST00000543525 TOP1MTQ969P6 601 aa13.54□□□□□ -0.24
PPME1-208ENST00000543525 UBXN10Q96LJ8 280 aa13.54□□□□□ -0.24
PPME1-208ENST00000543525 UNC93B1Q9H1C4 597 aa13.54□□□□□ -0.24
PPME1-208ENST00000543525 FBXO44Q9H4M3 255 aa13.54□□□□□ -0.24
PPME1-208ENST00000543525 TRPC7Q9HCX4 862 aa13.54□□□□□ -0.24
PPME1-208ENST00000543525 ABI2Q9NYB9 513 aaPredicted RBP13.54□□□□□ -0.24
PPME1-208ENST00000543525 SUCOQ9UBS9 1254 aaKnown RBP13.54□□□□□ -0.24
PPME1-208ENST00000543525 NLRC5Q86WI3 1866 aa13.54□□□□□ -0.24
PPME1-208ENST00000543525 MROH6A6NGR9 719 aa13.54□□□□□ -0.24
PPME1-208ENST00000543525 J3KR12 359 aa13.54□□□□□ -0.24
PPME1-208ENST00000543525 DNAJA2O60884 412 aa13.54□□□□□ -0.24
PPME1-208ENST00000543525 MYCNP04198 464 aaPredicted RBP13.54□□□□□ -0.24
PPME1-208ENST00000543525 ITGB1P05556 798 aa13.54□□□□□ -0.24
PPME1-208ENST00000543525 PABPC4LP0CB38 370 aaKnown RBP13.54□□□□□ -0.24
PPME1-208ENST00000543525 KCNA5P22460 613 aa13.54□□□□□ -0.24
PPME1-208ENST00000543525 GSTT1P30711 240 aa13.54□□□□□ -0.24
PPME1-208ENST00000543525 MSX2P35548 267 aaPredicted RBP13.54□□□□□ -0.24
PPME1-208ENST00000543525 PRAMEP78395 509 aa13.54□□□□□ -0.24
PPME1-208ENST00000543525 DSC2Q02487 901 aa13.54□□□□□ -0.24
PPME1-208ENST00000543525 TNK2Q07912 1038 aa13.54□□□□□ -0.24
PPME1-208ENST00000543525 LAMB3Q13751 1172 aa13.54□□□□□ -0.24
PPME1-208ENST00000543525 LPIN1Q14693 890 aa13.54□□□□□ -0.24
PPME1-208ENST00000543525 TLR1Q15399 786 aa13.54□□□□□ -0.24
PPME1-208ENST00000543525 AGKQ53H12 422 aa13.54□□□□□ -0.24
PPME1-208ENST00000543525 FAM45BPQ6NSW5 357 aa13.54□□□□□ -0.24
PPME1-208ENST00000543525 TFAP2DQ7Z6R9 452 aa13.54□□□□□ -0.24
PPME1-208ENST00000543525 ZNF354CQ86Y25 554 aa13.54□□□□□ -0.24
PPME1-208ENST00000543525 TICAM1Q8IUC6 712 aa13.54□□□□□ -0.24
PPME1-208ENST00000543525 ZNF683Q8IZ20 524 aa13.54□□□□□ -0.24
PPME1-208ENST00000543525 TEX26Q8N6G2 289 aa13.54□□□□□ -0.24
PPME1-208ENST00000543525 OR13J1Q8NGT2 312 aa13.54□□□□□ -0.24
PPME1-208ENST00000543525 FAM45AQ8TCE6 357 aa13.54□□□□□ -0.24
PPME1-208ENST00000543525 PABPC5Q96DU9 382 aaKnown RBP13.54□□□□□ -0.24
PPME1-208ENST00000543525 ASB9Q96DX5 294 aa13.54□□□□□ -0.24
PPME1-208ENST00000543525 C8orf48Q96LL4 319 aa13.54□□□□□ -0.24
PPME1-208ENST00000543525 ZCWPW1Q9H0M4 648 aa13.54□□□□□ -0.24
PPME1-208ENST00000543525 SARDHQ9UL12 918 aa13.54□□□□□ -0.24
PPME1-208ENST00000543525 TRAF6Q9Y4K3 522 aa13.54□□□□□ -0.24
PPME1-208ENST00000543525 PCDHGA7Q9Y5G6 932 aa13.54□□□□□ -0.24
PPME1-208ENST00000543525 SCN10AQ9Y5Y9 1956 aa13.54□□□□□ -0.24
PPME1-208ENST00000543525 TDRD15B5MCY1 1934 aaKnown RBP13.53□□□□□ -0.24
PPME1-208ENST00000543525 SMIM31A0A1B0GVY4 71 aa13.53□□□□□ -0.24
PPME1-208ENST00000543525 TRPA1O75762 1119 aa13.53□□□□□ -0.24
PPME1-208ENST00000543525 CRTAMO95727 393 aa13.53□□□□□ -0.24
PPME1-208ENST00000543525 S1PR4O95977 384 aa13.53□□□□□ -0.24
PPME1-208ENST00000543525 CAPNS1P04632 268 aa13.53□□□□□ -0.24
PPME1-208ENST00000543525 MMP2P08253 660 aa13.53□□□□□ -0.24
PPME1-208ENST00000543525 SNRPB2P08579 225 aaKnown RBP13.53□□□□□ -0.24
PPME1-208ENST00000543525 OR4Q2P0C623 313 aa13.53□□□□□ -0.24
PPME1-208ENST00000543525 HOXB8P17481 243 aaPredicted RBP13.53□□□□□ -0.24
PPME1-208ENST00000543525 PMLP29590 882 aa13.53□□□□□ -0.24
PPME1-208ENST00000543525 ATP4BP51164 291 aa13.53□□□□□ -0.24
PPME1-208ENST00000543525 MAXP61244 160 aa13.53□□□□□ -0.24
PPME1-208ENST00000543525 SLC10A7Q0GE19 358 aa13.53□□□□□ -0.24
PPME1-208ENST00000543525 TRAP1Q12931 704 aaKnown RBP13.53□□□□□ -0.24
PPME1-208ENST00000543525 NFE2Q16621 373 aaPredicted RBP13.53□□□□□ -0.24
PPME1-208ENST00000543525 MS4A13Q5J8X5 152 aa13.53□□□□□ -0.24
PPME1-208ENST00000543525 MFSD14CQ5VZR4 134 aa13.53□□□□□ -0.24
PPME1-208ENST00000543525 REP15Q6BDI9 236 aa13.53□□□□□ -0.24
PPME1-208ENST00000543525 NCSTNQ92542 709 aa13.53□□□□□ -0.24
PPME1-208ENST00000543525 HDAC10Q969S8 669 aa13.53□□□□□ -0.24
PPME1-208ENST00000543525 PHF21BQ96EK2 531 aa13.53□□□□□ -0.24
PPME1-208ENST00000543525 L3HYPDHQ96EM0 354 aa13.53□□□□□ -0.24
PPME1-208ENST00000543525 KLHL5Q96PQ7 755 aa13.53□□□□□ -0.24
PPME1-208ENST00000543525 PKP2Q99959 881 aa13.53□□□□□ -0.24
PPME1-208ENST00000543525 GSTO2Q9H4Y5 243 aa13.53□□□□□ -0.24
PPME1-208ENST00000543525 INPPL1O15357 1258 aa13.52□□□□□ -0.24
PPME1-208ENST00000543525 WISP3O95389 354 aaPredicted RBP13.52□□□□□ -0.24
PPME1-208ENST00000543525 CYBAP13498 195 aa13.52□□□□□ -0.24
PPME1-208ENST00000543525 SH3BGRP55822 239 aaPredicted RBP13.52□□□□□ -0.24
PPME1-208ENST00000543525 LRP8Q14114 963 aa13.52□□□□□ -0.24
PPME1-208ENST00000543525 TRIM25Q14258 630 aaKnown RBP13.52□□□□□ -0.24
PPME1-208ENST00000543525 SIRPB2Q5JXA9 342 aa13.52□□□□□ -0.24
PPME1-208ENST00000543525 PCDH20Q8N6Y1 951 aaKnown RBP13.52□□□□□ -0.24
PPME1-208ENST00000543525 RIN3Q8TB24 985 aa13.52□□□□□ -0.24
PPME1-208ENST00000543525 FUBP3Q96I24 572 aaKnown RBP eCLIP13.52□□□□□ -0.24
PPME1-208ENST00000543525 SLC25A23Q9BV35 468 aa13.52□□□□□ -0.24
PPME1-208ENST00000543525 VCX3AQ9NNX9 186 aa13.52□□□□□ -0.24
PPME1-208ENST00000543525 CACNA2D2Q9NY47 1150 aa13.52□□□□□ -0.24
PPME1-208ENST00000543525 CNOT11Q9UKZ1 510 aaKnown RBP13.52□□□□□ -0.24
PPME1-208ENST00000543525 AP4B1Q9Y6B7 739 aa13.52□□□□□ -0.24
PPME1-208ENST00000543525 IGLV3-10A0A075B6K4 115 aa13.52□□□□□ -0.25
PPME1-208ENST00000543525 SRP72O76094 671 aaKnown RBP13.52□□□□□ -0.25
PPME1-208ENST00000543525 C8BP07358 591 aa13.52□□□□□ -0.25
PPME1-208ENST00000543525 HAPLN1P10915 354 aaPredicted RBP13.52□□□□□ -0.25
PPME1-208ENST00000543525 TCN1P20061 433 aaPredicted RBP13.52□□□□□ -0.25
PPME1-208ENST00000543525 PLK1P53350 603 aa13.52□□□□□ -0.25
PPME1-208ENST00000543525 CDKN2DP55273 166 aa13.52□□□□□ -0.25
PPME1-208ENST00000543525 STX1BP61266 288 aa13.52□□□□□ -0.25
PPME1-208ENST00000543525 IL10RBQ08334 325 aa13.52□□□□□ -0.25
PPME1-208ENST00000543525 EFEMP1Q12805 493 aa13.52□□□□□ -0.25
PPME1-208ENST00000543525 DYNC1I2Q13409 638 aaKnown RBP13.52□□□□□ -0.25
PPME1-208ENST00000543525 TRIP4Q15650 581 aaPredicted RBP13.52□□□□□ -0.25
PPME1-208ENST00000543525 ZNF678Q5SXM1 525 aa13.52□□□□□ -0.25
PPME1-208ENST00000543525 HACD2Q6Y1H2 254 aa13.52□□□□□ -0.25
PPME1-208ENST00000543525 RAB44Q7Z6P3 723 aaPredicted RBP13.52□□□□□ -0.25
PPME1-208ENST00000543525 LILRA2Q8N149 483 aa13.52□□□□□ -0.25
PPME1-208ENST00000543525 ANKRD49Q8WVL7 239 aa13.52□□□□□ -0.25
PPME1-208ENST00000543525 TADA1Q96BN2 335 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms