RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.23□□□□□ -1.57
CLIP1-217ENST00000543205 GTSE1Q9NYZ3 720 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 CTTNBP2NLQ9P2B4 639 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 WNT16Q9UBV4 365 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 NENFQ9UMX5 172 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 ZKSCAN5Q9Y2L8 839 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 EPN1Q9Y6I3 576 aaPredicted RBP5.23□□□□□ -1.57
CLIP1-217ENST00000543205 OBSL1O75147 1896 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 DOCK8Q8NF50 2099 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 TMEM191CA6NGB0 347 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 EIF3CLB5ME19 914 aaKnown RBP5.23□□□□□ -1.57
CLIP1-217ENST00000543205 ACSL4O60488 711 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 NDUFA10O95299 355 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 LATS1O95835 1130 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 IGLV3-25P01717 112 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 IGLV3-27P01718 113 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 KLKB1P03952 638 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 CYBBP04839 570 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 CYP1A2P05177 515 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 TMEM253P0C7T8 217 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 PSMA2P25787 234 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 MAGEA1P43355 309 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 CXCR3P49682 368 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 GUCY1A3Q02108 690 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 GAD2Q05329 585 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 SIGLEC14Q08ET2 396 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 PMS2P11Q13670 270 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 SLBPQ14493 270 aaKnown RBP eCLIP5.23□□□□□ -1.57
CLIP1-217ENST00000543205 PPP2R5DQ14738 602 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 SMAD1Q15797 465 aaKnown RBP5.23□□□□□ -1.57
CLIP1-217ENST00000543205 C15orf59Q2T9L4 293 aaPredicted RBP5.23□□□□□ -1.57
CLIP1-217ENST00000543205 ARL13BQ3SXY8 428 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 HSF5Q4G112 596 aaPredicted RBP5.23□□□□□ -1.57
CLIP1-217ENST00000543205 BRMS1LQ5PSV4 323 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 ADGRF1Q5T601 910 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 PRAMEF13Q5VWM6 474 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 DENND5AQ6IQ26 1287 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 TRNP1Q6NT89 227 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 TPGS1Q6ZTW0 290 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 STRADAQ7RTN6 431 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 MAMDC2Q7Z304 686 aaPredicted RBP5.23□□□□□ -1.57
CLIP1-217ENST00000543205 MCATQ8IVS2 390 aaKnown RBP5.23□□□□□ -1.57
CLIP1-217ENST00000543205 MRPL41Q8IXM3 137 aaKnown RBP5.23□□□□□ -1.57
CLIP1-217ENST00000543205 MIER2Q8N344 545 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 ATG16L2Q8NAA4 619 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 BVESQ8NE79 360 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 CCDC112Q8NEF3 446 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 ADCY4Q8NFM4 1077 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 FAM172AQ8WUF8 416 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 EDAQ92838 391 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 NT5C3BQ969T7 300 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 EXOC4Q96A65 974 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 AZIN2Q96A70 460 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 ARHGEF26Q96DR7 871 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 PGAP3Q96FM1 320 aaPredicted RBP5.23□□□□□ -1.57
CLIP1-217ENST00000543205 BTN2A3PQ96KV6 586 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 EIF3CQ99613 913 aaKnown RBP5.23□□□□□ -1.57
CLIP1-217ENST00000543205 CNPY3Q9BT09 278 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 PACSIN1Q9BY11 444 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 KRTAP4-9Q9BYQ8 210 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 FOXQ1Q9C009 403 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 C8orf33Q9H7E9 229 aaPredicted RBP5.23□□□□□ -1.57
CLIP1-217ENST00000543205 WASH6PQ9NQA3 447 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 HPS4Q9NQG7 708 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 SPHK2Q9NRA0 654 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 PLSCR4Q9NRQ2 329 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 HEBP1Q9NRV9 189 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 PIGVQ9NUD9 493 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 TUBD1Q9UJT1 453 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 CA14Q9ULX7 337 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 PCDHA13Q9Y5I0 950 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 PIAS3Q9Y6X2 628 aa5.23□□□□□ -1.57
CLIP1-217ENST00000543205 DENND4CQ5VZ89 1909 aa5.22□□□□□ -1.57
CLIP1-217ENST00000543205 ANAPC1Q9H1A4 1944 aa5.22□□□□□ -1.57
CLIP1-217ENST00000543205 GOLGA6L7A0A1B0GV03 622 aa5.22□□□□□ -1.57
CLIP1-217ENST00000543205 TYW5A2RUC4 315 aaKnown RBP5.22□□□□□ -1.57
CLIP1-217ENST00000543205 KCNU1A8MYU2 1149 aa5.22□□□□□ -1.57
CLIP1-217ENST00000543205 PI4K2BG5E9Z4 385 aa5.22□□□□□ -1.57
CLIP1-217ENST00000543205 MYO1FO00160 1098 aa5.22□□□□□ -1.57
CLIP1-217ENST00000543205 ARNTLO00327 626 aa5.22□□□□□ -1.57
CLIP1-217ENST00000543205 MAN2B1O00754 1011 aa5.22□□□□□ -1.57
CLIP1-217ENST00000543205 CCP110O43303 1012 aa5.22□□□□□ -1.57
CLIP1-217ENST00000543205 TSPAN3O60637 253 aa5.22□□□□□ -1.57
CLIP1-217ENST00000543205 RNF8O76064 485 aa5.22□□□□□ -1.57
CLIP1-217ENST00000543205 LRIG2O94898 1065 aa5.22□□□□□ -1.57
CLIP1-217ENST00000543205 LCA5LO95447 670 aa5.22□□□□□ -1.57
CLIP1-217ENST00000543205 CYP17A1P05093 508 aa5.22□□□□□ -1.57
CLIP1-217ENST00000543205 H2AFB1P0C5Y9 115 aa5.22□□□□□ -1.57
CLIP1-217ENST00000543205 H2AFB2P0C5Z0 115 aa5.22□□□□□ -1.57
CLIP1-217ENST00000543205 FOSL1P15407 271 aa5.22□□□□□ -1.57
CLIP1-217ENST00000543205 HPDP32754 393 aaPredicted RBP5.22□□□□□ -1.57
CLIP1-217ENST00000543205 ACTN2P35609 894 aa5.22□□□□□ -1.57
CLIP1-217ENST00000543205 DRG2P55039 364 aaKnown RBP5.22□□□□□ -1.57
CLIP1-217ENST00000543205 VCPP55072 806 aaKnown RBP5.22□□□□□ -1.57
CLIP1-217ENST00000543205 MLLT6P55198 1093 aaPredicted RBP5.22□□□□□ -1.57
CLIP1-217ENST00000543205 GFRA1P56159 465 aa5.22□□□□□ -1.57
CLIP1-217ENST00000543205 NHLH1Q02575 133 aa5.22□□□□□ -1.57
CLIP1-217ENST00000543205 PRKCQQ04759 706 aa5.22□□□□□ -1.57
CLIP1-217ENST00000543205 EIF4EBP2Q13542 120 aaPredicted RBP5.22□□□□□ -1.57
CLIP1-217ENST00000543205 PIGHQ14442 188 aaPredicted RBP5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms