RNA–Protein interactions for RNA: ENST00000543184.5

PRAME-214, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,758 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-214ENST00000543184 HOXA11P31270 313 aaPredicted RBP14.28□□□□□ -0.12
PRAME-214ENST00000543184 GRM5P41594 1212 aa14.28□□□□□ -0.12
PRAME-214ENST00000543184 HSPA13P48723 471 aa14.28□□□□□ -0.12
PRAME-214ENST00000543184 RAB10P61026 200 aa14.28□□□□□ -0.12
PRAME-214ENST00000543184 NHSL2Q5HYW2 709 aa14.28□□□□□ -0.12
PRAME-214ENST00000543184 FGD3Q5JSP0 725 aa14.28□□□□□ -0.12
PRAME-214ENST00000543184 ZNF470Q6ECI4 717 aa14.28□□□□□ -0.12
PRAME-214ENST00000543184 RWDD4Q6NW29 188 aaKnown RBP14.28□□□□□ -0.12
PRAME-214ENST00000543184 TMEM26Q6ZUK4 368 aa14.28□□□□□ -0.12
PRAME-214ENST00000543184 ZNF554Q86TJ5 538 aa14.28□□□□□ -0.12
PRAME-214ENST00000543184 ZDHHC17Q8IUH5 632 aa14.28□□□□□ -0.12
PRAME-214ENST00000543184 FBXL8Q96CD0 374 aa14.28□□□□□ -0.12
PRAME-214ENST00000543184 NPY6RQ99463 290 aa14.28□□□□□ -0.12
PRAME-214ENST00000543184 MTG1Q9BT17 334 aaPredicted RBP14.28□□□□□ -0.12
PRAME-214ENST00000543184 OSBPL11Q9BXB4 747 aa14.28□□□□□ -0.12
PRAME-214ENST00000543184 ULBP1Q9BZM6 244 aa14.28□□□□□ -0.12
PRAME-214ENST00000543184 GBA3Q9H227 469 aa14.28□□□□□ -0.12
PRAME-214ENST00000543184 TMEM30AQ9NV96 361 aa14.28□□□□□ -0.12
PRAME-214ENST00000543184 DDIT4Q9NX09 232 aa14.28□□□□□ -0.12
PRAME-214ENST00000543184 GTF2IRD1Q9UHL9 959 aa14.28□□□□□ -0.12
PRAME-214ENST00000543184 THSD7BQ9C0I4 1608 aa14.28□□□□□ -0.12
PRAME-214ENST00000543184 ZNF487B1APH4 448 aa14.28□□□□□ -0.12
PRAME-214ENST00000543184 DLGAP1O14490 977 aa14.28□□□□□ -0.12
PRAME-214ENST00000543184 UBFD1O14562 309 aaKnown RBP14.28□□□□□ -0.12
PRAME-214ENST00000543184 MTHFD1P11586 935 aaKnown RBP14.28□□□□□ -0.12
PRAME-214ENST00000543184 IMPDH2P12268 514 aa14.28□□□□□ -0.12
PRAME-214ENST00000543184 VARSP26640 1264 aaKnown RBP14.28□□□□□ -0.12
PRAME-214ENST00000543184 KCNC1P48547 511 aa14.28□□□□□ -0.12
PRAME-214ENST00000543184 PMS2P3Q13401 168 aa14.28□□□□□ -0.12
PRAME-214ENST00000543184 NEDD8Q15843 81 aa14.28□□□□□ -0.12
PRAME-214ENST00000543184 VPS26BQ4G0F5 336 aa14.28□□□□□ -0.12
PRAME-214ENST00000543184 CCSAPQ6IQ19 270 aaPredicted RBP14.28□□□□□ -0.12
PRAME-214ENST00000543184 GPR141Q7Z602 305 aa14.28□□□□□ -0.12
PRAME-214ENST00000543184 SETD3Q86TU7 594 aaPredicted RBP14.28□□□□□ -0.12
PRAME-214ENST00000543184 EPHX4Q8IUS5 362 aa14.28□□□□□ -0.12
PRAME-214ENST00000543184 PELI3Q8N2H9 469 aa14.28□□□□□ -0.12
PRAME-214ENST00000543184 RYBPQ8N488 228 aaPredicted RBP14.28□□□□□ -0.12
PRAME-214ENST00000543184 TMEM40Q8WWA1 233 aa14.28□□□□□ -0.12
PRAME-214ENST00000543184 OLFM1Q99784 485 aa14.28□□□□□ -0.12
PRAME-214ENST00000543184 FICDQ9BVA6 458 aa14.28□□□□□ -0.12
PRAME-214ENST00000543184 MCOLN1Q9GZU1 580 aa14.28□□□□□ -0.12
PRAME-214ENST00000543184 PNPLA3Q9NST1 481 aa14.28□□□□□ -0.12
PRAME-214ENST00000543184 USP22Q9UPT9 525 aa14.28□□□□□ -0.12
PRAME-214ENST00000543184 C17orf102A2RUQ5 167 aa14.27□□□□□ -0.12
PRAME-214ENST00000543184 NR5A2O00482 541 aa14.27□□□□□ -0.12
PRAME-214ENST00000543184 C8BP07358 591 aa14.27□□□□□ -0.12
PRAME-214ENST00000543184 NCK1P16333 377 aa14.27□□□□□ -0.12
PRAME-214ENST00000543184 NR4A1P22736 598 aa14.27□□□□□ -0.12
PRAME-214ENST00000543184 NOS2P35228 1153 aa14.27□□□□□ -0.12
PRAME-214ENST00000543184 CSE1LP55060 971 aaKnown RBP14.27□□□□□ -0.12
PRAME-214ENST00000543184 BNIP3Q12983 259 aa14.27□□□□□ -0.12
PRAME-214ENST00000543184 FBXO47Q5MNV8 452 aa14.27□□□□□ -0.12
PRAME-214ENST00000543184 KIAA0319Q5VV43 1072 aa14.27□□□□□ -0.12
PRAME-214ENST00000543184 FBXO46Q6PJ61 603 aaPredicted RBP14.27□□□□□ -0.12
PRAME-214ENST00000543184 PAQR9Q6ZVX9 377 aa14.27□□□□□ -0.12
PRAME-214ENST00000543184 CUZD1Q86UP6 607 aa14.27□□□□□ -0.12
PRAME-214ENST00000543184 SIX6OS1Q8N1H7 587 aa14.27□□□□□ -0.12
PRAME-214ENST00000543184 KLHDC9Q8NEP7 349 aa14.27□□□□□ -0.12
PRAME-214ENST00000543184 ANKRD49Q8WVL7 239 aa14.27□□□□□ -0.12
PRAME-214ENST00000543184 BRD8Q9H0E9 1235 aa14.27□□□□□ -0.12
PRAME-214ENST00000543184 CLK4Q9HAZ1 481 aaKnown RBP14.27□□□□□ -0.12
PRAME-214ENST00000543184 SPAG4Q9NPE6 437 aa14.27□□□□□ -0.12
PRAME-214ENST00000543184 VTI1BQ9UEU0 232 aa14.27□□□□□ -0.12
PRAME-214ENST00000543184 CHD7Q9P2D1 2997 aa14.27□□□□□ -0.13
PRAME-214ENST00000543184 ZFC3H1O60293 1989 aaKnown RBP14.27□□□□□ -0.13
PRAME-214ENST00000543184 RNF103-CHMP3A0A140T963 221 aa14.27□□□□□ -0.13
PRAME-214ENST00000543184 CAPNS1P04632 268 aa14.27□□□□□ -0.13
PRAME-214ENST00000543184 CLCN2P51788 898 aa14.27□□□□□ -0.13
PRAME-214ENST00000543184 ATP1A4Q13733 1029 aa14.27□□□□□ -0.13
PRAME-214ENST00000543184 TBCELQ5QJ74 424 aa14.27□□□□□ -0.13
PRAME-214ENST00000543184 DHFR2Q86XF0 187 aa14.27□□□□□ -0.13
PRAME-214ENST00000543184 NCKIPSDQ9NZQ3 722 aa14.27□□□□□ -0.13
PRAME-214ENST00000543184 MYLKQ15746 1914 aa14.26□□□□□ -0.13
PRAME-214ENST00000543184 GIPC1O14908 333 aa14.26□□□□□ -0.13
PRAME-214ENST00000543184 H2AFYO75367 372 aaKnown RBP14.26□□□□□ -0.13
PRAME-214ENST00000543184 KIF19Q2TAC6 998 aa14.26□□□□□ -0.13
PRAME-214ENST00000543184 PLA2G4EQ3MJ16 856 aa14.26□□□□□ -0.13
PRAME-214ENST00000543184 BORAQ6PGQ7 559 aa14.26□□□□□ -0.13
PRAME-214ENST00000543184 CATSPER4Q7RTX7 472 aa14.26□□□□□ -0.13
PRAME-214ENST00000543184 FUNDC1Q8IVP5 155 aa14.26□□□□□ -0.13
PRAME-214ENST00000543184 PAWRQ96IZ0 340 aaKnown RBP14.26□□□□□ -0.13
PRAME-214ENST00000543184 PAK6Q9NQU5 681 aaPredicted RBP14.26□□□□□ -0.13
PRAME-214ENST00000543184 SUCOQ9UBS9 1254 aaKnown RBP14.26□□□□□ -0.13
PRAME-214ENST00000543184 EVLQ9UI08 416 aaPredicted RBP14.26□□□□□ -0.13
PRAME-214ENST00000543184 CROTQ9UKG9 612 aa14.26□□□□□ -0.13
PRAME-214ENST00000543184 GMEB1Q9Y692 573 aa14.26□□□□□ -0.13
PRAME-214ENST00000543184 SNRPB2P08579 225 aaKnown RBP14.26□□□□□ -0.13
PRAME-214ENST00000543184 ALDOCP09972 364 aaKnown RBP14.26□□□□□ -0.13
PRAME-214ENST00000543184 HOXD8P13378 290 aaPredicted RBP14.26□□□□□ -0.13
PRAME-214ENST00000543184 BDNFP23560 247 aa14.26□□□□□ -0.13
PRAME-214ENST00000543184 SLC7A1P30825 629 aa14.26□□□□□ -0.13
PRAME-214ENST00000543184 THPOP40225 353 aa14.26□□□□□ -0.13
PRAME-214ENST00000543184 SNX16P57768 344 aa14.26□□□□□ -0.13
PRAME-214ENST00000543184 BTBD8Q5XKL5 378 aa14.26□□□□□ -0.13
PRAME-214ENST00000543184 CYHR1Q6ZMK1 362 aa14.26□□□□□ -0.13
PRAME-214ENST00000543184 PIM3Q86V86 326 aa14.26□□□□□ -0.13
PRAME-214ENST00000543184 LZTR1Q8N653 840 aa14.26□□□□□ -0.13
PRAME-214ENST00000543184 B3GALNT2Q8NCR0 500 aa14.26□□□□□ -0.13
PRAME-214ENST00000543184 TTC16Q8NEE8 873 aa14.26□□□□□ -0.13
PRAME-214ENST00000543184 KCNA7Q96RP8 456 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms