RNA–Protein interactions for RNA: ENST00000543004.5

OTUB1-211, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 5 BASIC

Gene OTUB1, Length 1,647 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-211ENST00000543004 BTBD1Q9H0C5 482 aa20.89■□□□□ 0.94
OTUB1-211ENST00000543004 GOLGA6AQ9NYA3 693 aa20.89■□□□□ 0.94
OTUB1-211ENST00000543004 WSB2Q9NYS7 404 aaPredicted RBP20.89■□□□□ 0.94
OTUB1-211ENST00000543004 DMGDHQ9UI17 866 aaKnown RBP20.89■□□□□ 0.94
OTUB1-211ENST00000543004 TPX2Q9ULW0 747 aaKnown RBP20.89■□□□□ 0.94
OTUB1-211ENST00000543004 PPIL1Q9Y3C6 166 aa20.89■□□□□ 0.94
OTUB1-211ENST00000543004 TRPM6Q9BX84 2022 aa20.89■□□□□ 0.94
OTUB1-211ENST00000543004 CCDC163A0A0D9SF12 145 aa20.89■□□□□ 0.93
OTUB1-211ENST00000543004 A0A1W2PQ67 120 aa20.89■□□□□ 0.93
OTUB1-211ENST00000543004 ESYT3A0FGR9 886 aa20.89■□□□□ 0.93
OTUB1-211ENST00000543004 GOLGA8CPA6NN73 597 aa20.89■□□□□ 0.93
OTUB1-211ENST00000543004 LHCGRP22888 699 aa20.89■□□□□ 0.93
OTUB1-211ENST00000543004 CD6P30203 668 aa20.89■□□□□ 0.93
OTUB1-211ENST00000543004 MMP12P39900 470 aa20.89■□□□□ 0.93
OTUB1-211ENST00000543004 RALGDSQ12967 914 aa20.89■□□□□ 0.93
OTUB1-211ENST00000543004 DUPD1Q68J44 220 aa20.89■□□□□ 0.93
OTUB1-211ENST00000543004 ZNF534Q76KX8 674 aa20.89■□□□□ 0.93
OTUB1-211ENST00000543004 NAT8LQ8N9F0 302 aa20.89■□□□□ 0.93
OTUB1-211ENST00000543004 CCHCR1Q8TD31 782 aa20.89■□□□□ 0.93
OTUB1-211ENST00000543004 NELL1Q92832 810 aa20.89■□□□□ 0.93
OTUB1-211ENST00000543004 MCCC1Q96RQ3 725 aaPredicted RBP20.89■□□□□ 0.93
OTUB1-211ENST00000543004 GPR174Q9BXC1 333 aa20.89■□□□□ 0.93
OTUB1-211ENST00000543004 EIF2B3Q9NR50 452 aaKnown RBP20.89■□□□□ 0.93
OTUB1-211ENST00000543004 THADAQ6YHU6 1953 aa20.88■□□□□ 0.93
OTUB1-211ENST00000543004 ERI2A8K979 691 aaKnown RBP20.88■□□□□ 0.93
OTUB1-211ENST00000543004 AURKAO14965 403 aa20.88■□□□□ 0.93
OTUB1-211ENST00000543004 PSMD3O43242 534 aa20.88■□□□□ 0.93
OTUB1-211ENST00000543004 HEXIM1O94992 359 aaKnown RBP20.88■□□□□ 0.93
OTUB1-211ENST00000543004 HLA-DPA1P20036 260 aa20.88■□□□□ 0.93
OTUB1-211ENST00000543004 TPSB2P20231 275 aa20.88■□□□□ 0.93
OTUB1-211ENST00000543004 MAGEA6P43360 314 aa20.88■□□□□ 0.93
OTUB1-211ENST00000543004 RPL26P61254 145 aaKnown RBP20.88■□□□□ 0.93
OTUB1-211ENST00000543004 TPSAB1Q15661 275 aa20.88■□□□□ 0.93
OTUB1-211ENST00000543004 USP39Q53GS9 565 aaKnown RBP20.88■□□□□ 0.93
OTUB1-211ENST00000543004 NAPEPLDQ6IQ20 393 aa20.88■□□□□ 0.93
OTUB1-211ENST00000543004 C6orf106Q9H6K1 298 aaPredicted RBP20.88■□□□□ 0.93
OTUB1-211ENST00000543004 RPL26L1Q9UNX3 145 aaKnown RBP20.88■□□□□ 0.93
OTUB1-211ENST00000543004 SHOC2Q9UQ13 582 aa20.88■□□□□ 0.93
OTUB1-211ENST00000543004 TBC1D3DA0A087WVF3 549 aa20.87■□□□□ 0.93
OTUB1-211ENST00000543004 TBC1D3IA0A087WXS9 549 aa20.87■□□□□ 0.93
OTUB1-211ENST00000543004 TBC1D3EA0A087X179 549 aa20.87■□□□□ 0.93
OTUB1-211ENST00000543004 TBC1D3KA0A087X1G2 549 aa20.87■□□□□ 0.93
OTUB1-211ENST00000543004 TBC1D3FA6NER0 549 aaPredicted RBP20.87■□□□□ 0.93
OTUB1-211ENST00000543004 CAPN8A6NHC0 703 aa20.87■□□□□ 0.93
OTUB1-211ENST00000543004 TBC1D3LB9A6J9 549 aa20.87■□□□□ 0.93
OTUB1-211ENST00000543004 NEMP1O14524 444 aa20.87■□□□□ 0.93
OTUB1-211ENST00000543004 SLC7A4O43246 635 aa20.87■□□□□ 0.93
OTUB1-211ENST00000543004 HRO43593 1189 aa20.87■□□□□ 0.93
OTUB1-211ENST00000543004 AVILO75366 819 aa20.87■□□□□ 0.93
OTUB1-211ENST00000543004 SEC31AO94979 1220 aaKnown RBP20.87■□□□□ 0.93
OTUB1-211ENST00000543004 PCDH8O95206 1070 aa20.87■□□□□ 0.93
OTUB1-211ENST00000543004 SEMA4FO95754 770 aa20.87■□□□□ 0.93
OTUB1-211ENST00000543004 FGF1P05230 155 aa20.87■□□□□ 0.93
OTUB1-211ENST00000543004 TBC1D3HP0C7X1 549 aa20.87■□□□□ 0.93
OTUB1-211ENST00000543004 TNNT3P45378 269 aaPredicted RBP20.87■□□□□ 0.93
OTUB1-211ENST00000543004 ITGA8P53708 1063 aa20.87■□□□□ 0.93
OTUB1-211ENST00000543004 PPP2CBP62714 309 aa20.87■□□□□ 0.93
OTUB1-211ENST00000543004 PPP2CAP67775 309 aa20.87■□□□□ 0.93
OTUB1-211ENST00000543004 MSLNQ13421 630 aaPredicted RBP20.87■□□□□ 0.93
OTUB1-211ENST00000543004 DENND2CQ68D51 928 aa20.87■□□□□ 0.93
OTUB1-211ENST00000543004 TBC1D3GQ6DHY5 549 aa20.87■□□□□ 0.93
OTUB1-211ENST00000543004 TBC1D3CQ6IPX1 549 aa20.87■□□□□ 0.93
OTUB1-211ENST00000543004 CCDC70Q6NSX1 233 aa20.87■□□□□ 0.93
OTUB1-211ENST00000543004 ERAP2Q6P179 960 aa20.87■□□□□ 0.93
OTUB1-211ENST00000543004 CRTC1Q6UUV9 634 aa20.87■□□□□ 0.93
OTUB1-211ENST00000543004 PPP1R21Q6ZMI0 780 aa20.87■□□□□ 0.93
OTUB1-211ENST00000543004 PPIL6Q8IXY8 311 aa20.87■□□□□ 0.93
OTUB1-211ENST00000543004 TBC1D3Q8IZP1 549 aaPredicted RBP20.87■□□□□ 0.93
OTUB1-211ENST00000543004 RAB7BQ96AH8 199 aa20.87■□□□□ 0.93
OTUB1-211ENST00000543004 SNF8Q96H20 258 aa20.87■□□□□ 0.93
OTUB1-211ENST00000543004 PWWP2AQ96N64 755 aa20.87■□□□□ 0.93
OTUB1-211ENST00000543004 SGK2Q9HBY8 427 aa20.87■□□□□ 0.93
OTUB1-211ENST00000543004 ARNT2Q9HBZ2 717 aa20.87■□□□□ 0.93
OTUB1-211ENST00000543004 SCN8AQ9UQD0 1980 aa20.87■□□□□ 0.93
OTUB1-211ENST00000543004 MMP20O60882 483 aa20.86■□□□□ 0.93
OTUB1-211ENST00000543004 CLDN7O95471 211 aa20.86■□□□□ 0.93
OTUB1-211ENST00000543004 SLC4A1P02730 911 aa20.86■□□□□ 0.93
OTUB1-211ENST00000543004 RHOXF2BP0C7M4 288 aa20.86■□□□□ 0.93
OTUB1-211ENST00000543004 OXTRP30559 389 aa20.86■□□□□ 0.93
OTUB1-211ENST00000543004 SFSWAPQ12872 951 aaKnown RBP20.86■□□□□ 0.93
OTUB1-211ENST00000543004 CDKN3Q16667 212 aa20.86■□□□□ 0.93
OTUB1-211ENST00000543004 CERCAMQ5T4B2 595 aa20.86■□□□□ 0.93
OTUB1-211ENST00000543004 SEL1L3Q68CR1 1132 aa20.86■□□□□ 0.93
OTUB1-211ENST00000543004 USP45Q70EL2 814 aa20.86■□□□□ 0.93
OTUB1-211ENST00000543004 DPPA4Q7L190 304 aa20.86■□□□□ 0.93
OTUB1-211ENST00000543004 DNAAF3Q8N9W5 541 aa20.86■□□□□ 0.93
OTUB1-211ENST00000543004 BLOC1S5Q8TDH9 187 aa20.86■□□□□ 0.93
OTUB1-211ENST00000543004 KLK6Q92876 244 aa20.86■□□□□ 0.93
OTUB1-211ENST00000543004 EID2BQ96D98 161 aa20.86■□□□□ 0.93
OTUB1-211ENST00000543004 RHOXF2Q9BQY4 288 aa20.86■□□□□ 0.93
OTUB1-211ENST00000543004 CASS4Q9NQ75 786 aa20.86■□□□□ 0.93
OTUB1-211ENST00000543004 GRHL1Q9NZI5 618 aa20.86■□□□□ 0.93
OTUB1-211ENST00000543004 ZFR2Q9UPR6 939 aaKnown RBP20.86■□□□□ 0.93
OTUB1-211ENST00000543004 COQ6Q9Y2Z9 468 aa20.86■□□□□ 0.93
OTUB1-211ENST00000543004 UTP11Q9Y3A2 253 aaKnown RBP20.86■□□□□ 0.93
OTUB1-211ENST00000543004 FANCMQ8IYD8 2048 aa20.86■□□□□ 0.93
OTUB1-211ENST00000543004 SDK1Q7Z5N4 2213 aa20.86■□□□□ 0.93
OTUB1-211ENST00000543004 H0Y858 1186 aa20.86■□□□□ 0.93
OTUB1-211ENST00000543004 AP1G1O43747 822 aa20.86■□□□□ 0.93
OTUB1-211ENST00000543004 MAT2AP31153 395 aaKnown RBP20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms