RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 ESRP1Q6NXG1 681 aaKnown RBP15.72■□□□□ 0.11
VPS33A-206ENST00000542310 SLC35F3Q8IY50 421 aa15.72■□□□□ 0.11
VPS33A-206ENST00000542310 BBS5Q8N3I7 341 aa15.72■□□□□ 0.11
VPS33A-206ENST00000542310 ARL10Q8N8L6 244 aa15.72■□□□□ 0.11
VPS33A-206ENST00000542310 WDR92Q96MX6 357 aa15.72■□□□□ 0.11
VPS33A-206ENST00000542310 CSPG4P5Q96PW8 444 aa15.72■□□□□ 0.11
VPS33A-206ENST00000542310 MGME1Q9BQP7 344 aa15.72■□□□□ 0.11
VPS33A-206ENST00000542310 APOOQ9BUR5 198 aa15.72■□□□□ 0.11
VPS33A-206ENST00000542310 CLPBQ9H078 707 aa15.72■□□□□ 0.11
VPS33A-206ENST00000542310 IP6K2Q9UHH9 426 aa15.72■□□□□ 0.11
VPS33A-206ENST00000542310 DGKBQ9Y6T7 804 aa15.72■□□□□ 0.11
VPS33A-206ENST00000542310 SMG1Q96Q15 3661 aaKnown RBP15.72■□□□□ 0.11
VPS33A-206ENST00000542310 MUSKO15146 869 aa15.71■□□□□ 0.11
VPS33A-206ENST00000542310 HTRA2O43464 458 aaPredicted RBP15.71■□□□□ 0.11
VPS33A-206ENST00000542310 PCCBP05166 539 aa15.71■□□□□ 0.11
VPS33A-206ENST00000542310 HOXC4P09017 264 aaPredicted RBP15.71■□□□□ 0.11
VPS33A-206ENST00000542310 CR2P20023 1033 aa15.71■□□□□ 0.11
VPS33A-206ENST00000542310 LSSP48449 732 aa15.71■□□□□ 0.11
VPS33A-206ENST00000542310 UBASH3AP57075 661 aa15.71■□□□□ 0.11
VPS33A-206ENST00000542310 ERVPABLB-1P60509 514 aa15.71■□□□□ 0.11
VPS33A-206ENST00000542310 GABREP78334 506 aa15.71■□□□□ 0.11
VPS33A-206ENST00000542310 INPP5AQ14642 412 aa15.71■□□□□ 0.11
VPS33A-206ENST00000542310 ISXQ2M1V0 245 aa15.71■□□□□ 0.11
VPS33A-206ENST00000542310 LIPIQ6XZB0 460 aa15.71■□□□□ 0.11
VPS33A-206ENST00000542310 RBM44Q6ZP01 1051 aaKnown RBP15.71■□□□□ 0.11
VPS33A-206ENST00000542310 LUZP1Q86V48 1076 aa15.71■□□□□ 0.11
VPS33A-206ENST00000542310 GKN2Q86XP6 184 aa15.71■□□□□ 0.11
VPS33A-206ENST00000542310 ATPAF2Q8N5M1 289 aa15.71■□□□□ 0.11
VPS33A-206ENST00000542310 SCG3Q8WXD2 468 aaKnown RBP15.71■□□□□ 0.11
VPS33A-206ENST00000542310 HSPH1Q92598 858 aa15.71■□□□□ 0.11
VPS33A-206ENST00000542310 NUDCD1Q96RS6 583 aa15.71■□□□□ 0.11
VPS33A-206ENST00000542310 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.71■□□□□ 0.11
VPS33A-206ENST00000542310 THAP2Q9H0W7 228 aa15.71■□□□□ 0.11
VPS33A-206ENST00000542310 POLR1BQ9H9Y6 1135 aa15.71■□□□□ 0.11
VPS33A-206ENST00000542310 KCTD5Q9NXV2 234 aa15.71■□□□□ 0.11
VPS33A-206ENST00000542310 KLQ9UEF7 1012 aa15.71■□□□□ 0.11
VPS33A-206ENST00000542310 ANAPC7Q9UJX3 599 aa15.71■□□□□ 0.11
VPS33A-206ENST00000542310 CAPN11Q9UMQ6 739 aa15.71■□□□□ 0.11
VPS33A-206ENST00000542310 DOLKQ9UPQ8 538 aa15.71■□□□□ 0.11
VPS33A-206ENST00000542310 IGSF10Q6WRI0 2623 aa15.71■□□□□ 0.11
VPS33A-206ENST00000542310 CPED1A4D0V7 1026 aa15.7■□□□□ 0.1
VPS33A-206ENST00000542310 GOLGA6L19H0YKK7 550 aa15.7■□□□□ 0.1
VPS33A-206ENST00000542310 CACNB4O00305 520 aaPredicted RBP15.7■□□□□ 0.1
VPS33A-206ENST00000542310 YY2O15391 372 aa15.7■□□□□ 0.1
VPS33A-206ENST00000542310 USP12O75317 370 aa15.7■□□□□ 0.1
VPS33A-206ENST00000542310 RECQL5O94762 991 aaPredicted RBP15.7■□□□□ 0.1
VPS33A-206ENST00000542310 PEX11BO96011 259 aa15.7■□□□□ 0.1
VPS33A-206ENST00000542310 CYP1A2P05177 515 aa15.7■□□□□ 0.1
VPS33A-206ENST00000542310 RARAP10276 462 aa15.7■□□□□ 0.1
VPS33A-206ENST00000542310 CTSEP14091 401 aa15.7■□□□□ 0.1
VPS33A-206ENST00000542310 HOXB3P14651 431 aaPredicted RBP15.7■□□□□ 0.1
VPS33A-206ENST00000542310 TGM2P21980 687 aa15.7■□□□□ 0.1
VPS33A-206ENST00000542310 KELP23276 732 aa15.7■□□□□ 0.1
VPS33A-206ENST00000542310 SCNN1BP51168 640 aa15.7■□□□□ 0.1
VPS33A-206ENST00000542310 CDH6P55285 790 aa15.7■□□□□ 0.1
VPS33A-206ENST00000542310 PCBP4P57723 403 aaKnown RBP15.7■□□□□ 0.1
VPS33A-206ENST00000542310 SRP54P61011 504 aaKnown RBP15.7■□□□□ 0.1
VPS33A-206ENST00000542310 SLC10A7Q0GE19 358 aa15.7■□□□□ 0.1
VPS33A-206ENST00000542310 C1orf61Q13536 156 aa15.7■□□□□ 0.1
VPS33A-206ENST00000542310 ENPP7Q6UWV6 458 aa15.7■□□□□ 0.1
VPS33A-206ENST00000542310 LRRC49Q8IUZ0 686 aa15.7■□□□□ 0.1
VPS33A-206ENST00000542310 HID1Q8IV36 788 aa15.7■□□□□ 0.1
VPS33A-206ENST00000542310 PAF1Q8N7H5 531 aa15.7■□□□□ 0.1
VPS33A-206ENST00000542310 OR6C4Q8NGE1 309 aa15.7■□□□□ 0.1
VPS33A-206ENST00000542310 PCDH19Q8TAB3 1148 aa15.7■□□□□ 0.1
VPS33A-206ENST00000542310 NSMCE1Q8WV22 266 aa15.7■□□□□ 0.1
VPS33A-206ENST00000542310 RBM15Q96T37 977 aaKnown RBP eCLIP15.7■□□□□ 0.1
VPS33A-206ENST00000542310 NUP85Q9BW27 656 aa15.7■□□□□ 0.1
VPS33A-206ENST00000542310 PCDH18Q9HCL0 1135 aa15.7■□□□□ 0.1
VPS33A-206ENST00000542310 OR1A2Q9Y585 309 aa15.7■□□□□ 0.1
VPS33A-206ENST00000542310 ATRXP46100 2492 aa15.7■□□□□ 0.1
VPS33A-206ENST00000542310 BPTFQ12830 3046 aa15.69■□□□□ 0.1
VPS33A-206ENST00000542310 TNFRSF10CO14798 259 aa15.69■□□□□ 0.1
VPS33A-206ENST00000542310 MAFKO60675 156 aa15.69■□□□□ 0.1
VPS33A-206ENST00000542310 PRKCGP05129 697 aa15.69■□□□□ 0.1
VPS33A-206ENST00000542310 TCF4P15884 667 aa15.69■□□□□ 0.1
VPS33A-206ENST00000542310 GM2AP17900 193 aa15.69■□□□□ 0.1
VPS33A-206ENST00000542310 PTMSP20962 102 aa15.69■□□□□ 0.1
VPS33A-206ENST00000542310 AMPD1P23109 780 aa15.69■□□□□ 0.1
VPS33A-206ENST00000542310 MLLT3P42568 568 aaPredicted RBP15.69■□□□□ 0.1
VPS33A-206ENST00000542310 SOWAHCQ53LP3 525 aaPredicted RBP15.69■□□□□ 0.1
VPS33A-206ENST00000542310 PERM1Q5SV97 790 aa15.69■□□□□ 0.1
VPS33A-206ENST00000542310 TP53INP2Q8IXH6 220 aa15.69■□□□□ 0.1
VPS33A-206ENST00000542310 KYQ8NBH2 561 aa15.69■□□□□ 0.1
VPS33A-206ENST00000542310 ZNF248Q8NDW4 579 aa15.69■□□□□ 0.1
VPS33A-206ENST00000542310 OR56A4Q8NGH8 313 aa15.69■□□□□ 0.1
VPS33A-206ENST00000542310 FAM71BQ8TC56 605 aa15.69■□□□□ 0.1
VPS33A-206ENST00000542310 PDXPQ96GD0 296 aa15.69■□□□□ 0.1
VPS33A-206ENST00000542310 HIC2Q96JB3 615 aa15.69■□□□□ 0.1
VPS33A-206ENST00000542310 PRORYQ9H606 182 aa15.69■□□□□ 0.1
VPS33A-206ENST00000542310 THSD1Q9NS62 852 aa15.69■□□□□ 0.1
VPS33A-206ENST00000542310 ETNK2Q9NVF9 386 aa15.69■□□□□ 0.1
VPS33A-206ENST00000542310 B4GALT6Q9UBX8 382 aa15.69■□□□□ 0.1
VPS33A-206ENST00000542310 LCMT1Q9UIC8 334 aa15.69■□□□□ 0.1
VPS33A-206ENST00000542310 PADI4Q9UM07 663 aa15.69■□□□□ 0.1
VPS33A-206ENST00000542310 LUC7L2Q9Y383 392 aaKnown RBP15.69■□□□□ 0.1
VPS33A-206ENST00000542310 PCDHGA8Q9Y5G5 932 aa15.69■□□□□ 0.1
VPS33A-206ENST00000542310 KIF26BQ2KJY2 2108 aa15.68■□□□□ 0.1
VPS33A-206ENST00000542310 A0A087X0T9 212 aa15.68■□□□□ 0.1
VPS33A-206ENST00000542310 MYO1FO00160 1098 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms