RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 CD72P21854 359 aa4.4□□□□□ -1.71
SNHG1-217ENST00000541578 TYK2P29597 1187 aa4.4□□□□□ -1.71
SNHG1-217ENST00000541578 EEF1DP29692 281 aaKnown RBP4.4□□□□□ -1.71
SNHG1-217ENST00000541578 TM4SF1P30408 202 aa4.4□□□□□ -1.71
SNHG1-217ENST00000541578 ICAM3P32942 547 aa4.4□□□□□ -1.71
SNHG1-217ENST00000541578 BLKP51451 505 aa4.4□□□□□ -1.71
SNHG1-217ENST00000541578 CYP2J2P51589 502 aa4.4□□□□□ -1.71
SNHG1-217ENST00000541578 RRP1P56182 461 aaKnown RBP4.4□□□□□ -1.71
SNHG1-217ENST00000541578 ZNF91Q05481 1191 aa4.4□□□□□ -1.71
SNHG1-217ENST00000541578 LAMB3Q13751 1172 aa4.4□□□□□ -1.71
SNHG1-217ENST00000541578 RUNX2Q13950 521 aa4.4□□□□□ -1.71
SNHG1-217ENST00000541578 NTRK2Q16620 822 aa4.4□□□□□ -1.71
SNHG1-217ENST00000541578 C10orf76Q5T2E6 689 aa4.4□□□□□ -1.71
SNHG1-217ENST00000541578 SERTAD4-AS1Q5TG53 156 aa4.4□□□□□ -1.71
SNHG1-217ENST00000541578 GKAP1Q5VSY0 366 aaPredicted RBP4.4□□□□□ -1.71
SNHG1-217ENST00000541578 FAM171A1Q5VUB5 890 aa4.4□□□□□ -1.71
SNHG1-217ENST00000541578 SHC4Q6S5L8 630 aa4.4□□□□□ -1.71
SNHG1-217ENST00000541578 CRELD2Q6UXH1 353 aaPredicted RBP4.4□□□□□ -1.71
SNHG1-217ENST00000541578 KDELC2Q7Z4H8 507 aa4.4□□□□□ -1.71
SNHG1-217ENST00000541578 GPAT4Q86UL3 456 aa4.4□□□□□ -1.71
SNHG1-217ENST00000541578 SCAIQ8N9R8 606 aa4.4□□□□□ -1.71
SNHG1-217ENST00000541578 AVL9Q8NBF6 648 aa4.4□□□□□ -1.71
SNHG1-217ENST00000541578 KCTD6Q8NC69 237 aa4.4□□□□□ -1.71
SNHG1-217ENST00000541578 APPL2Q8NEU8 664 aa4.4□□□□□ -1.71
SNHG1-217ENST00000541578 NEK9Q8TD19 979 aa4.4□□□□□ -1.71
SNHG1-217ENST00000541578 KAT2BQ92831 832 aa4.4□□□□□ -1.71
SNHG1-217ENST00000541578 MOAP1Q96BY2 351 aa4.4□□□□□ -1.71
SNHG1-217ENST00000541578 ZBTB9Q96C00 473 aa4.4□□□□□ -1.71
SNHG1-217ENST00000541578 ZNF653Q96CK0 615 aa4.4□□□□□ -1.71
SNHG1-217ENST00000541578 CCDC34Q96HJ3 373 aa4.4□□□□□ -1.71
SNHG1-217ENST00000541578 ZNF845Q96IR2 970 aaPredicted RBP4.4□□□□□ -1.71
SNHG1-217ENST00000541578 HEMGNQ9BXL5 484 aa4.4□□□□□ -1.71
SNHG1-217ENST00000541578 KRTAP9-8Q9BYQ0 159 aa4.4□□□□□ -1.71
SNHG1-217ENST00000541578 NUAK2Q9H093 628 aa4.4□□□□□ -1.71
SNHG1-217ENST00000541578 ALDH8A1Q9H2A2 487 aaPredicted RBP4.4□□□□□ -1.71
SNHG1-217ENST00000541578 SLC22A11Q9NSA0 550 aa4.4□□□□□ -1.71
SNHG1-217ENST00000541578 C20orf141Q9NUB4 165 aa4.4□□□□□ -1.71
SNHG1-217ENST00000541578 DLGAP2Q9P1A6 1054 aa4.4□□□□□ -1.71
SNHG1-217ENST00000541578 MKLN1Q9UL63 735 aa4.4□□□□□ -1.71
SNHG1-217ENST00000541578 PPIEQ9UNP9 301 aaKnown RBP4.4□□□□□ -1.71
SNHG1-217ENST00000541578 PCDHGB5Q9Y5G0 923 aa4.4□□□□□ -1.71
SNHG1-217ENST00000541578 ARHGAP35Q9NRY4 1499 aa4.4□□□□□ -1.71
SNHG1-217ENST00000541578 ARHGAP23Q9P227 1491 aa4.4□□□□□ -1.71
SNHG1-217ENST00000541578 SPATA31A1Q5TZJ5 1347 aa4.4□□□□□ -1.71
SNHG1-217ENST00000541578 ARHGAP31Q2M1Z3 1444 aa4.39□□□□□ -1.71
SNHG1-217ENST00000541578 FYCO1Q9BQS8 1478 aa4.39□□□□□ -1.71
SNHG1-217ENST00000541578 CTDSP2O14595 271 aa4.39□□□□□ -1.71
SNHG1-217ENST00000541578 TGFB1I1O43294 461 aa4.39□□□□□ -1.71
SNHG1-217ENST00000541578 KIF1CO43896 1103 aaKnown RBP4.39□□□□□ -1.71
SNHG1-217ENST00000541578 USP12O75317 370 aa4.39□□□□□ -1.71
SNHG1-217ENST00000541578 AFPP02771 609 aaKnown RBP4.39□□□□□ -1.71
SNHG1-217ENST00000541578 NR2F1P10589 423 aa4.39□□□□□ -1.71
SNHG1-217ENST00000541578 FCGR2AP12318 317 aa4.39□□□□□ -1.71
SNHG1-217ENST00000541578 AKR1A1P14550 325 aa4.39□□□□□ -1.71
SNHG1-217ENST00000541578 SLC2A4P14672 509 aa4.39□□□□□ -1.71
SNHG1-217ENST00000541578 TMEM11P17152 192 aa4.39□□□□□ -1.71
SNHG1-217ENST00000541578 HOXD9P28356 352 aaPredicted RBP4.39□□□□□ -1.71
SNHG1-217ENST00000541578 TACR3P29371 465 aa4.39□□□□□ -1.71
SNHG1-217ENST00000541578 PIK3CAP42336 1068 aa4.39□□□□□ -1.71
SNHG1-217ENST00000541578 MATR3P43243 847 aaKnown RBP eCLIP4.39□□□□□ -1.71
SNHG1-217ENST00000541578 CAPZA2P47755 286 aa4.39□□□□□ -1.71
SNHG1-217ENST00000541578 ADPRHP54922 357 aa4.39□□□□□ -1.71
SNHG1-217ENST00000541578 YPEL5P62699 121 aa4.39□□□□□ -1.71
SNHG1-217ENST00000541578 HSF1Q00613 529 aa4.39□□□□□ -1.71
SNHG1-217ENST00000541578 AIMP1Q12904 312 aaKnown RBP4.39□□□□□ -1.71
SNHG1-217ENST00000541578 CSTF3Q12996 717 aaKnown RBP4.39□□□□□ -1.71
SNHG1-217ENST00000541578 IDI1Q13907 227 aa4.39□□□□□ -1.71
SNHG1-217ENST00000541578 GALNT3Q14435 633 aa4.39□□□□□ -1.71
SNHG1-217ENST00000541578 HIST2H2ACQ16777 129 aaPredicted RBP4.39□□□□□ -1.71
SNHG1-217ENST00000541578 C5orf22Q49AR2 442 aa4.39□□□□□ -1.71
SNHG1-217ENST00000541578 NAPEPLDQ6IQ20 393 aa4.39□□□□□ -1.71
SNHG1-217ENST00000541578 CPLX2Q6PUV4 134 aaKnown RBP4.39□□□□□ -1.71
SNHG1-217ENST00000541578 PRSS45Q7RTY3 260 aa4.39□□□□□ -1.71
SNHG1-217ENST00000541578 ARHGAP12Q8IWW6 846 aa4.39□□□□□ -1.71
SNHG1-217ENST00000541578 SETD9Q8NE22 299 aa4.39□□□□□ -1.71
SNHG1-217ENST00000541578 GDPD5Q8WTR4 605 aa4.39□□□□□ -1.71
SNHG1-217ENST00000541578 CELF1Q92879 486 aaKnown RBP4.39□□□□□ -1.71
SNHG1-217ENST00000541578 MAP7D2Q96T17 732 aa4.39□□□□□ -1.71
SNHG1-217ENST00000541578 CLSTN3Q9BQT9 956 aa4.39□□□□□ -1.71
SNHG1-217ENST00000541578 PDE7BQ9NP56 450 aa4.39□□□□□ -1.71
SNHG1-217ENST00000541578 GIMAP2Q9UG22 337 aa4.39□□□□□ -1.71
SNHG1-217ENST00000541578 SLCO3A1Q9UIG8 710 aa4.39□□□□□ -1.71
SNHG1-217ENST00000541578 HAO1Q9UJM8 370 aa4.39□□□□□ -1.71
SNHG1-217ENST00000541578 A4GNTQ9UNA3 340 aa4.39□□□□□ -1.71
SNHG1-217ENST00000541578 FAM169AQ9Y6X4 670 aa4.39□□□□□ -1.71
SNHG1-217ENST00000541578 EMSYQ7Z589 1322 aa4.39□□□□□ -1.71
SNHG1-217ENST00000541578 COL16A1Q07092 1604 aaPredicted RBP4.39□□□□□ -1.71
SNHG1-217ENST00000541578 AHDC1Q5TGY3 1603 aaPredicted RBP4.39□□□□□ -1.71
SNHG1-217ENST00000541578 PIK3R4Q99570 1358 aa4.39□□□□□ -1.71
SNHG1-217ENST00000541578 ERVK-7P63135 1459 aa4.38□□□□□ -1.71
SNHG1-217ENST00000541578 CCDC141Q6ZP82 1450 aa4.38□□□□□ -1.71
SNHG1-217ENST00000541578 MBD5Q9P267 1494 aa4.38□□□□□ -1.71
SNHG1-217ENST00000541578 KCNJ18B7U540 433 aa4.38□□□□□ -1.71
SNHG1-217ENST00000541578 USP17L23D6RBM5 183 aa4.38□□□□□ -1.71
SNHG1-217ENST00000541578 SOCS2O14508 198 aa4.38□□□□□ -1.71
SNHG1-217ENST00000541578 PRYO14603 147 aa4.38□□□□□ -1.71
SNHG1-217ENST00000541578 ADAM10O14672 748 aa4.38□□□□□ -1.71
SNHG1-217ENST00000541578 MSI1O43347 362 aaKnown RBP4.38□□□□□ -1.71
SNHG1-217ENST00000541578 NDUFS3O75489 264 aa4.38□□□□□ -1.71
SNHG1-217ENST00000541578 NFATC1O95644 943 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms