RNA–Protein interactions for RNA: ENST00000540812.1

TRIM65-203, Transcript of tripartite motif containing 65, humanhuman

TSL 2

Gene TRIM65, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-203ENST00000540812 SFTPA2Q8IWL1 248 aa16.34■□□□□ 0.21
TRIM65-203ENST00000540812 FUBP1Q96AE4 644 aaKnown RBP16.34■□□□□ 0.21
TRIM65-203ENST00000540812 WBP1Q96G27 269 aa16.34■□□□□ 0.21
TRIM65-203ENST00000540812 LIN37Q96GY3 246 aaPredicted RBP16.34■□□□□ 0.21
TRIM65-203ENST00000540812 NSMCE3Q96MG7 304 aa16.34■□□□□ 0.21
TRIM65-203ENST00000540812 PEBP4Q96S96 227 aa16.34■□□□□ 0.21
TRIM65-203ENST00000540812 KCTD15Q96SI1 283 aaPredicted RBP16.34■□□□□ 0.21
TRIM65-203ENST00000540812 SYT11Q9BT88 431 aa16.34■□□□□ 0.21
TRIM65-203ENST00000540812 DHX35Q9H5Z1 703 aaKnown RBP16.34■□□□□ 0.21
TRIM65-203ENST00000540812 EPB41L5Q9HCM4 733 aa16.34■□□□□ 0.21
TRIM65-203ENST00000540812 FGF22Q9HCT0 170 aa16.34■□□□□ 0.21
TRIM65-203ENST00000540812 ANO10Q9NW15 660 aa16.34■□□□□ 0.21
TRIM65-203ENST00000540812 AP4E1Q9UPM8 1137 aa16.34■□□□□ 0.21
TRIM65-203ENST00000540812 TMEM202A6NGA9 273 aa16.33■□□□□ 0.2
TRIM65-203ENST00000540812 ARHGAP42A6NI28 874 aa16.33■□□□□ 0.2
TRIM65-203ENST00000540812 K7ENP7 123 aa16.33■□□□□ 0.2
TRIM65-203ENST00000540812 EEF2KO00418 725 aaKnown RBP16.33■□□□□ 0.2
TRIM65-203ENST00000540812 PLD2O14939 933 aa16.33■□□□□ 0.2
TRIM65-203ENST00000540812 PALMO75781 387 aa16.33■□□□□ 0.2
TRIM65-203ENST00000540812 TNFP01375 233 aa16.33■□□□□ 0.2
TRIM65-203ENST00000540812 ITGA2BP08514 1039 aa16.33■□□□□ 0.2
TRIM65-203ENST00000540812 HGFP14210 728 aa16.33■□□□□ 0.2
TRIM65-203ENST00000540812 GM2AP17900 193 aa16.33■□□□□ 0.2
TRIM65-203ENST00000540812 PSMA2P25787 234 aa16.33■□□□□ 0.2
TRIM65-203ENST00000540812 HTR7P34969 479 aa16.33■□□□□ 0.2
TRIM65-203ENST00000540812 MLLT3P42568 568 aaPredicted RBP16.33■□□□□ 0.2
TRIM65-203ENST00000540812 CSNK1DP48730 415 aa16.33■□□□□ 0.2
TRIM65-203ENST00000540812 MYL5Q02045 173 aa16.33■□□□□ 0.2
TRIM65-203ENST00000540812 MAMLD1Q13495 774 aa16.33■□□□□ 0.2
TRIM65-203ENST00000540812 NCAPHQ15003 741 aa16.33■□□□□ 0.2
TRIM65-203ENST00000540812 AFMIDQ63HM1 303 aa16.33■□□□□ 0.2
TRIM65-203ENST00000540812 INO80CQ6PI98 192 aaPredicted RBP16.33■□□□□ 0.2
TRIM65-203ENST00000540812 IRF2BP2Q7Z5L9 587 aa16.33■□□□□ 0.2
TRIM65-203ENST00000540812 ARHGAP12Q8IWW6 846 aa16.33■□□□□ 0.2
TRIM65-203ENST00000540812 FBXO39Q8N4B4 442 aa16.33■□□□□ 0.2
TRIM65-203ENST00000540812 ANKRD20A12PQ8NF67 263 aa16.33■□□□□ 0.2
TRIM65-203ENST00000540812 GPR156Q8NFN8 814 aa16.33■□□□□ 0.2
TRIM65-203ENST00000540812 ATL2Q8NHH9 583 aa16.33■□□□□ 0.2
TRIM65-203ENST00000540812 CCDC97Q96F63 343 aaPredicted RBP16.33■□□□□ 0.2
TRIM65-203ENST00000540812 GFM1Q96RP9 751 aaKnown RBP16.33■□□□□ 0.2
TRIM65-203ENST00000540812 TUBGCP5Q96RT8 1024 aa16.33■□□□□ 0.2
TRIM65-203ENST00000540812 RBM15Q96T37 977 aaKnown RBP eCLIP16.33■□□□□ 0.2
TRIM65-203ENST00000540812 SNRNP25Q9BV90 132 aaKnown RBP16.33■□□□□ 0.2
TRIM65-203ENST00000540812 LRRN3Q9H3W5 708 aa16.33■□□□□ 0.2
TRIM65-203ENST00000540812 ATP13A3Q9H7F0 1226 aa16.33■□□□□ 0.2
TRIM65-203ENST00000540812 MRPL40Q9NQ50 206 aaKnown RBP16.33■□□□□ 0.2
TRIM65-203ENST00000540812 PCSK1NQ9UHG2 260 aa16.33■□□□□ 0.2
TRIM65-203ENST00000540812 DGKBQ9Y6T7 804 aa16.33■□□□□ 0.2
TRIM65-203ENST00000540812 LRRC10BA6NIK2 292 aa16.32■□□□□ 0.2
TRIM65-203ENST00000540812 ANKRD36A6QL64 1941 aa16.32■□□□□ 0.2
TRIM65-203ENST00000540812 TMCO5BA8MYB1 307 aa16.32■□□□□ 0.2
TRIM65-203ENST00000540812 RECQL5O94762 991 aaPredicted RBP16.32■□□□□ 0.2
TRIM65-203ENST00000540812 FERP16591 822 aa16.32■□□□□ 0.2
TRIM65-203ENST00000540812 SERPINA4P29622 427 aa16.32■□□□□ 0.2
TRIM65-203ENST00000540812 UGT1A5P35504 534 aa16.32■□□□□ 0.2
TRIM65-203ENST00000540812 KIAA1024LP59773 190 aa16.32■□□□□ 0.2
TRIM65-203ENST00000540812 STX1AQ16623 288 aa16.32■□□□□ 0.2
TRIM65-203ENST00000540812 ZSCAN23Q3MJ62 389 aa16.32■□□□□ 0.2
TRIM65-203ENST00000540812 CAVIN1Q6NZI2 390 aaKnown RBP16.32■□□□□ 0.2
TRIM65-203ENST00000540812 LIPIQ6XZB0 460 aa16.32■□□□□ 0.2
TRIM65-203ENST00000540812 RFX8Q6ZV50 586 aa16.32■□□□□ 0.2
TRIM65-203ENST00000540812 CYP4V2Q6ZWL3 525 aaPredicted RBP16.32■□□□□ 0.2
TRIM65-203ENST00000540812 TP53INP2Q8IXH6 220 aa16.32■□□□□ 0.2
TRIM65-203ENST00000540812 PELI3Q8N2H9 469 aa16.32■□□□□ 0.2
TRIM65-203ENST00000540812 NPWQ8N729 165 aa16.32■□□□□ 0.2
TRIM65-203ENST00000540812 Q8N9G6 341 aaPredicted RBP16.32■□□□□ 0.2
TRIM65-203ENST00000540812 UNC13CQ8NB66 2214 aa16.32■□□□□ 0.2
TRIM65-203ENST00000540812 ECHDC3Q96DC8 303 aa16.32■□□□□ 0.2
TRIM65-203ENST00000540812 CINPQ9BW66 212 aaPredicted RBP16.32■□□□□ 0.2
TRIM65-203ENST00000540812 TRIM7Q9C029 511 aa16.32■□□□□ 0.2
TRIM65-203ENST00000540812 TTC24A2A3L6 582 aaPredicted RBP16.31■□□□□ 0.2
TRIM65-203ENST00000540812 CFAP69A5D8W1 941 aa16.31■□□□□ 0.2
TRIM65-203ENST00000540812 A8MX80 341 aa16.31■□□□□ 0.2
TRIM65-203ENST00000540812 AGRPO00253 132 aa16.31■□□□□ 0.2
TRIM65-203ENST00000540812 DFFAO00273 331 aa16.31■□□□□ 0.2
TRIM65-203ENST00000540812 CACNB4O00305 520 aaPredicted RBP16.31■□□□□ 0.2
TRIM65-203ENST00000540812 TRAFD1O14545 582 aaPredicted RBP16.31■□□□□ 0.2
TRIM65-203ENST00000540812 EFSO43281 561 aa16.31■□□□□ 0.2
TRIM65-203ENST00000540812 NOBOXO60393 691 aa16.31■□□□□ 0.2
TRIM65-203ENST00000540812 ATP1A3P13637 1013 aa16.31■□□□□ 0.2
TRIM65-203ENST00000540812 KRT10P13645 584 aa16.31■□□□□ 0.2
TRIM65-203ENST00000540812 ERCC2P18074 760 aa16.31■□□□□ 0.2
TRIM65-203ENST00000540812 CDK11BP21127 795 aaKnown RBP16.31■□□□□ 0.2
TRIM65-203ENST00000540812 TNFAIP3P21580 790 aa16.31■□□□□ 0.2
TRIM65-203ENST00000540812 SLC5A2P31639 672 aa16.31■□□□□ 0.2
TRIM65-203ENST00000540812 INHBCP55103 352 aa16.31■□□□□ 0.2
TRIM65-203ENST00000540812 SRSF6Q13247 344 aaKnown RBP16.31■□□□□ 0.2
TRIM65-203ENST00000540812 ERMARDQ5T6L9 678 aa16.31■□□□□ 0.2
TRIM65-203ENST00000540812 PLEKHA7Q6IQ23 1121 aa16.31■□□□□ 0.2
TRIM65-203ENST00000540812 RAB11FIP2Q7L804 512 aa16.31■□□□□ 0.2
TRIM65-203ENST00000540812 TAF8Q7Z7C8 310 aa16.31■□□□□ 0.2
TRIM65-203ENST00000540812 CCNJLQ8IV13 435 aa16.31■□□□□ 0.2
TRIM65-203ENST00000540812 OR56A4Q8NGH8 313 aa16.31■□□□□ 0.2
TRIM65-203ENST00000540812 CCL4L1Q8NHW4 92 aa16.31■□□□□ 0.2
TRIM65-203ENST00000540812 STRADBQ9C0K7 418 aa16.31■□□□□ 0.2
TRIM65-203ENST00000540812 TMEM168Q9H0V1 697 aa16.31■□□□□ 0.2
TRIM65-203ENST00000540812 SP110Q9HB58 689 aa16.31■□□□□ 0.2
TRIM65-203ENST00000540812 PARVAQ9NVD7 372 aa16.31■□□□□ 0.2
TRIM65-203ENST00000540812 WDR70Q9NW82 654 aa16.31■□□□□ 0.2
TRIM65-203ENST00000540812 DONSONQ9NYP3 566 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms