RNA–Protein interactions for RNA: ENST00000540317.5

CYB561A3-215, Transcript of cytochrome b561 family member A3, humanhuman

TSL 3

Gene CYB561A3, Length 1,557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-215ENST00000540317 BMPR2Q13873 1038 aa12.05□□□□□ -0.48
CYB561A3-215ENST00000540317 CCINQ13939 588 aa12.05□□□□□ -0.48
CYB561A3-215ENST00000540317 GAS6Q14393 721 aa12.05□□□□□ -0.48
CYB561A3-215ENST00000540317 UGP2Q16851 508 aa12.05□□□□□ -0.48
CYB561A3-215ENST00000540317 TEDDM1Q5T9Z0 273 aa12.05□□□□□ -0.48
CYB561A3-215ENST00000540317 TMCO4Q5TGY1 634 aa12.05□□□□□ -0.48
CYB561A3-215ENST00000540317 NADSYN1Q6IA69 706 aa12.05□□□□□ -0.48
CYB561A3-215ENST00000540317 RANBP10Q6VN20 620 aa12.05□□□□□ -0.48
CYB561A3-215ENST00000540317 KCNMB4Q86W47 210 aa12.05□□□□□ -0.48
CYB561A3-215ENST00000540317 LGI2Q8N0V4 545 aa12.05□□□□□ -0.48
CYB561A3-215ENST00000540317 BBS5Q8N3I7 341 aa12.05□□□□□ -0.48
CYB561A3-215ENST00000540317 SYNPOQ8N3V7 929 aa12.05□□□□□ -0.48
CYB561A3-215ENST00000540317 IPMKQ8NFU5 416 aa12.05□□□□□ -0.48
CYB561A3-215ENST00000540317 SPATA22Q8NHS9 363 aa12.05□□□□□ -0.48
CYB561A3-215ENST00000540317 ISL2Q96A47 359 aa12.05□□□□□ -0.48
CYB561A3-215ENST00000540317 IMP4Q96G21 291 aaKnown RBP12.05□□□□□ -0.48
CYB561A3-215ENST00000540317 RBBP8Q99708 897 aa12.05□□□□□ -0.48
CYB561A3-215ENST00000540317 FICDQ9BVA6 458 aa12.05□□□□□ -0.48
CYB561A3-215ENST00000540317 PRMT8Q9NR22 394 aaPredicted RBP12.05□□□□□ -0.48
CYB561A3-215ENST00000540317 C20orf96Q9NUD7 363 aaPredicted RBP12.05□□□□□ -0.48
CYB561A3-215ENST00000540317 UBP1Q9NZI7 540 aa12.05□□□□□ -0.48
CYB561A3-215ENST00000540317 USH1CQ9Y6N9 552 aa12.05□□□□□ -0.48
CYB561A3-215ENST00000540317 EP300Q09472 2414 aaPredicted RBP12.05□□□□□ -0.48
CYB561A3-215ENST00000540317 NUP210Q8TEM1 1887 aaPredicted RBP12.04□□□□□ -0.48
CYB561A3-215ENST00000540317 WDR87Q6ZQQ6 2873 aa12.04□□□□□ -0.48
CYB561A3-215ENST00000540317 FAM186AA6NE01 2351 aa12.04□□□□□ -0.48
CYB561A3-215ENST00000540317 SCAMP3O14828 347 aaKnown RBP12.04□□□□□ -0.48
CYB561A3-215ENST00000540317 PRAMEF11O60813 436 aa12.04□□□□□ -0.48
CYB561A3-215ENST00000540317 CLDN11O75508 207 aa12.04□□□□□ -0.48
CYB561A3-215ENST00000540317 TGDSO95455 350 aa12.04□□□□□ -0.48
CYB561A3-215ENST00000540317 MPOP05164 745 aa12.04□□□□□ -0.48
CYB561A3-215ENST00000540317 SERPINB8P50452 374 aa12.04□□□□□ -0.48
CYB561A3-215ENST00000540317 LIMK2P53671 638 aa12.04□□□□□ -0.48
CYB561A3-215ENST00000540317 WNT3AP56704 352 aa12.04□□□□□ -0.48
CYB561A3-215ENST00000540317 SLC7A9P82251 487 aa12.04□□□□□ -0.48
CYB561A3-215ENST00000540317 SATB1Q01826 763 aa12.04□□□□□ -0.48
CYB561A3-215ENST00000540317 CCDC15Q0P6D6 951 aa12.04□□□□□ -0.48
CYB561A3-215ENST00000540317 OLIG2Q13516 323 aa12.04□□□□□ -0.48
CYB561A3-215ENST00000540317 SLC14A2Q15849 920 aa12.04□□□□□ -0.48
CYB561A3-215ENST00000540317 EML3Q32P44 896 aa12.04□□□□□ -0.48
CYB561A3-215ENST00000540317 TMEM196Q5HYL7 178 aa12.04□□□□□ -0.48
CYB561A3-215ENST00000540317 DENND5AQ6IQ26 1287 aa12.04□□□□□ -0.48
CYB561A3-215ENST00000540317 KDELC1Q6UW63 502 aa12.04□□□□□ -0.48
CYB561A3-215ENST00000540317 FAM47EQ6ZV65 393 aa12.04□□□□□ -0.48
CYB561A3-215ENST00000540317 CHST9Q7L1S5 443 aa12.04□□□□□ -0.48
CYB561A3-215ENST00000540317 LCA5Q86VQ0 697 aa12.04□□□□□ -0.48
CYB561A3-215ENST00000540317 ZNF354CQ86Y25 554 aa12.04□□□□□ -0.48
CYB561A3-215ENST00000540317 CCDC63Q8NA47 563 aa12.04□□□□□ -0.48
CYB561A3-215ENST00000540317 CHFRQ96EP1 664 aa12.04□□□□□ -0.48
CYB561A3-215ENST00000540317 MRGPRX2Q96LB1 330 aa12.04□□□□□ -0.48
CYB561A3-215ENST00000540317 RANBP9Q96S59 729 aa12.04□□□□□ -0.48
CYB561A3-215ENST00000540317 P2RY13Q9BPV8 354 aa12.04□□□□□ -0.48
CYB561A3-215ENST00000540317 FAM126AQ9BYI3 521 aaPredicted RBP12.04□□□□□ -0.48
CYB561A3-215ENST00000540317 SLC13A1Q9BZW2 595 aa12.04□□□□□ -0.48
CYB561A3-215ENST00000540317 FBRSL1Q9HCM7 1045 aaKnown RBP12.04□□□□□ -0.48
CYB561A3-215ENST00000540317 CHRAC1Q9NRG0 131 aa12.04□□□□□ -0.48
CYB561A3-215ENST00000540317 PCMTD2Q9NV79 361 aa12.04□□□□□ -0.48
CYB561A3-215ENST00000540317 CFAP97Q9P2B7 532 aa12.04□□□□□ -0.48
CYB561A3-215ENST00000540317 DOCK4Q8N1I0 1966 aa12.03□□□□□ -0.48
CYB561A3-215ENST00000540317 HEATR9A2RTY3 570 aa12.03□□□□□ -0.48
CYB561A3-215ENST00000540317 COCHO43405 550 aa12.03□□□□□ -0.48
CYB561A3-215ENST00000540317 DCTN3O75935 186 aa12.03□□□□□ -0.48
CYB561A3-215ENST00000540317 NFATC1O95644 943 aa12.03□□□□□ -0.48
CYB561A3-215ENST00000540317 MT-CYBP00156 380 aaPredicted RBP12.03□□□□□ -0.48
CYB561A3-215ENST00000540317 TCF3P15923 654 aa12.03□□□□□ -0.48
CYB561A3-215ENST00000540317 TPH1P17752 444 aa12.03□□□□□ -0.48
CYB561A3-215ENST00000540317 TYK2P29597 1187 aa12.03□□□□□ -0.48
CYB561A3-215ENST00000540317 ETFBP38117 255 aa12.03□□□□□ -0.48
CYB561A3-215ENST00000540317 ACTN3Q08043 901 aaPredicted RBP12.03□□□□□ -0.48
CYB561A3-215ENST00000540317 RFTN1Q14699 578 aaPredicted RBP12.03□□□□□ -0.48
CYB561A3-215ENST00000540317 LBRQ14739 615 aaKnown RBP12.03□□□□□ -0.48
CYB561A3-215ENST00000540317 SETDB1Q15047 1291 aa12.03□□□□□ -0.48
CYB561A3-215ENST00000540317 FSTL4Q6MZW2 842 aa12.03□□□□□ -0.48
CYB561A3-215ENST00000540317 NLRP9Q7RTR0 991 aa12.03□□□□□ -0.48
CYB561A3-215ENST00000540317 STRA8Q7Z7C7 330 aa12.03□□□□□ -0.48
CYB561A3-215ENST00000540317 SETD3Q86TU7 594 aaPredicted RBP12.03□□□□□ -0.48
CYB561A3-215ENST00000540317 UNC5BQ8IZJ1 945 aa12.03□□□□□ -0.48
CYB561A3-215ENST00000540317 ADGRG2Q8IZP9 1017 aa12.03□□□□□ -0.48
CYB561A3-215ENST00000540317 ZBTB44Q8NCP5 570 aa12.03□□□□□ -0.48
CYB561A3-215ENST00000540317 TADA1Q96BN2 335 aa12.03□□□□□ -0.48
CYB561A3-215ENST00000540317 MFSD3Q96ES6 412 aa12.03□□□□□ -0.48
CYB561A3-215ENST00000540317 APOL2Q9BQE5 337 aa12.03□□□□□ -0.48
CYB561A3-215ENST00000540317 TSSK1BQ9BXA7 367 aa12.03□□□□□ -0.48
CYB561A3-215ENST00000540317 ATP13A1Q9HD20 1204 aa12.03□□□□□ -0.48
CYB561A3-215ENST00000540317 NT5MQ9NPB1 228 aa12.03□□□□□ -0.48
CYB561A3-215ENST00000540317 TCAF1Q9Y4C2 921 aa12.03□□□□□ -0.48
CYB561A3-215ENST00000540317 NUP205Q92621 2012 aa12.03□□□□□ -0.48
CYB561A3-215ENST00000540317 WDR91A4D1P6 747 aa12.02□□□□□ -0.49
CYB561A3-215ENST00000540317 J3KR12 359 aa12.02□□□□□ -0.49
CYB561A3-215ENST00000540317 SLC9A3R1O14745 358 aaPredicted RBP12.02□□□□□ -0.49
CYB561A3-215ENST00000540317 TPP1O14773 563 aa12.02□□□□□ -0.49
CYB561A3-215ENST00000540317 SIN3BO75182 1162 aa12.02□□□□□ -0.49
CYB561A3-215ENST00000540317 PMPCBO75439 489 aa12.02□□□□□ -0.49
CYB561A3-215ENST00000540317 PAPSS2O95340 614 aaPredicted RBP12.02□□□□□ -0.49
CYB561A3-215ENST00000540317 OLFM2O95897 454 aa12.02□□□□□ -0.49
CYB561A3-215ENST00000540317 EGFP01133 1207 aa12.02□□□□□ -0.49
CYB561A3-215ENST00000540317 EPOP01588 193 aa12.02□□□□□ -0.49
CYB561A3-215ENST00000540317 ALDOAP04075 364 aaKnown RBP12.02□□□□□ -0.49
CYB561A3-215ENST00000540317 DRD1P21728 446 aa12.02□□□□□ -0.49
CYB561A3-215ENST00000540317 CES1P23141 567 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms