RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 DEPDC1Q5TB30 811 aa10.04□□□□□ -0.8
TRAF1-202ENST00000540010 ARMC3Q5W041 872 aa10.04□□□□□ -0.8
TRAF1-202ENST00000540010 TAC4Q86UU9 113 aa10.04□□□□□ -0.8
TRAF1-202ENST00000540010 LRRTM3Q86VH5 581 aa10.04□□□□□ -0.8
TRAF1-202ENST00000540010 ZCCHC7Q8N3Z6 543 aaKnown RBP10.04□□□□□ -0.8
TRAF1-202ENST00000540010 OR52K2Q8NGK3 314 aa10.04□□□□□ -0.8
TRAF1-202ENST00000540010 BDH2Q9BUT1 245 aa10.04□□□□□ -0.8
TRAF1-202ENST00000540010 RNF208Q9H0X6 261 aa10.04□□□□□ -0.8
TRAF1-202ENST00000540010 ZNF556Q9HAH1 456 aa10.04□□□□□ -0.8
TRAF1-202ENST00000540010 SYTL2Q9HCH5 934 aa10.04□□□□□ -0.8
TRAF1-202ENST00000540010 S100A14Q9HCY8 104 aa10.04□□□□□ -0.8
TRAF1-202ENST00000540010 DNAJB4Q9UDY4 337 aa10.04□□□□□ -0.8
TRAF1-202ENST00000540010 FBXW11Q9UKB1 542 aa10.04□□□□□ -0.8
TRAF1-202ENST00000540010 PCDHB5Q9Y5E4 795 aa10.04□□□□□ -0.8
TRAF1-202ENST00000540010 SCN10AQ9Y5Y9 1956 aa10.04□□□□□ -0.8
TRAF1-202ENST00000540010 SLC12A8A0AV02 714 aa10.03□□□□□ -0.8
TRAF1-202ENST00000540010 TBKBP1A7MCY6 615 aa10.03□□□□□ -0.8
TRAF1-202ENST00000540010 NT5C1B-RDH14C9J2C7 533 aa10.03□□□□□ -0.8
TRAF1-202ENST00000540010 TCEA3O75764 348 aa10.03□□□□□ -0.8
TRAF1-202ENST00000540010 METTL18O95568 372 aa10.03□□□□□ -0.8
TRAF1-202ENST00000540010 RPL34P49207 117 aaKnown RBP10.03□□□□□ -0.8
TRAF1-202ENST00000540010 ITGADQ13349 1161 aa10.03□□□□□ -0.8
TRAF1-202ENST00000540010 FRG1Q14331 258 aaKnown RBP10.03□□□□□ -0.8
TRAF1-202ENST00000540010 FAM26DQ5JW98 314 aa10.03□□□□□ -0.8
TRAF1-202ENST00000540010 ANKS6Q68DC2 871 aa10.03□□□□□ -0.8
TRAF1-202ENST00000540010 ZNF280DQ6N043 979 aa10.03□□□□□ -0.8
TRAF1-202ENST00000540010 DQX1Q8TE96 717 aaKnown RBP10.03□□□□□ -0.8
TRAF1-202ENST00000540010 PPP1R2P1Q96PQ5 205 aa10.03□□□□□ -0.8
TRAF1-202ENST00000540010 SLC9A7Q96T83 725 aa10.03□□□□□ -0.8
TRAF1-202ENST00000540010 CIB1Q99828 191 aa10.03□□□□□ -0.8
TRAF1-202ENST00000540010 IL22Q9GZX6 179 aa10.03□□□□□ -0.8
TRAF1-202ENST00000540010 ABCC13Q9NSE7 274 aa10.03□□□□□ -0.8
TRAF1-202ENST00000540010 SPASTQ9UBP0 616 aa10.03□□□□□ -0.8
TRAF1-202ENST00000540010 SFMBT1Q9UHJ3 866 aa10.03□□□□□ -0.8
TRAF1-202ENST00000540010 EIF3LQ9Y262 564 aaKnown RBP10.03□□□□□ -0.8
TRAF1-202ENST00000540010 COMMD3-BMI1R4GMX3 469 aa10.03□□□□□ -0.8
TRAF1-202ENST00000540010 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.03□□□□□ -0.8
TRAF1-202ENST00000540010 ZNF487B1APH4 448 aa10.03□□□□□ -0.8
TRAF1-202ENST00000540010 CBX4O00257 560 aa10.03□□□□□ -0.8
TRAF1-202ENST00000540010 KRT75O95678 551 aa10.03□□□□□ -0.8
TRAF1-202ENST00000540010 IFNA8P32881 189 aa10.03□□□□□ -0.8
TRAF1-202ENST00000540010 VEGFBP49765 207 aa10.03□□□□□ -0.8
TRAF1-202ENST00000540010 GPX6P59796 221 aa10.03□□□□□ -0.8
TRAF1-202ENST00000540010 LSM3P62310 102 aaKnown RBP10.03□□□□□ -0.8
TRAF1-202ENST00000540010 NKX3-2P78367 333 aa10.03□□□□□ -0.8
TRAF1-202ENST00000540010 RUNX1T1Q06455 604 aa10.03□□□□□ -0.8
TRAF1-202ENST00000540010 KCNJ11Q14654 390 aa10.03□□□□□ -0.8
TRAF1-202ENST00000540010 TRIM71Q2Q1W2 868 aaKnown RBP10.03□□□□□ -0.8
TRAF1-202ENST00000540010 TJAP1Q5JTD0 557 aa10.03□□□□□ -0.8
TRAF1-202ENST00000540010 CLLU1OSQ5K130 101 aa10.03□□□□□ -0.8
TRAF1-202ENST00000540010 TIGD7Q6NT04 549 aaPredicted RBP10.03□□□□□ -0.8
TRAF1-202ENST00000540010 TTC23LQ6PF05 361 aa10.03□□□□□ -0.8
TRAF1-202ENST00000540010 EFL1Q7Z2Z2 1120 aaKnown RBP10.03□□□□□ -0.8
TRAF1-202ENST00000540010 SLC22A9Q8IVM8 553 aa10.03□□□□□ -0.8
TRAF1-202ENST00000540010 IRGQQ8WZA9 623 aa10.03□□□□□ -0.8
TRAF1-202ENST00000540010 FBXO32Q969P5 355 aa10.03□□□□□ -0.8
TRAF1-202ENST00000540010 GORASP1Q9BQQ3 440 aa10.03□□□□□ -0.8
TRAF1-202ENST00000540010 POLR1BQ9H9Y6 1135 aa10.03□□□□□ -0.8
TRAF1-202ENST00000540010 TMEM30AQ9NV96 361 aa10.03□□□□□ -0.8
TRAF1-202ENST00000540010 DAPK2Q9UIK4 370 aa10.03□□□□□ -0.8
TRAF1-202ENST00000540010 ZMYM5Q9UJ78 669 aa10.03□□□□□ -0.8
TRAF1-202ENST00000540010 TRHDEQ9UKU6 1024 aa10.03□□□□□ -0.8
TRAF1-202ENST00000540010 SMIM31A0A1B0GVY4 71 aa10.03□□□□□ -0.8
TRAF1-202ENST00000540010 M0QZQ0 153 aa10.03□□□□□ -0.8
TRAF1-202ENST00000540010 HS6ST1O60243 411 aa10.03□□□□□ -0.8
TRAF1-202ENST00000540010 SH3BGRLO75368 114 aa10.03□□□□□ -0.8
TRAF1-202ENST00000540010 GCATO75600 419 aa10.03□□□□□ -0.8
TRAF1-202ENST00000540010 CYP11A1P05108 521 aa10.03□□□□□ -0.8
TRAF1-202ENST00000540010 OCM2P0CE71 109 aa10.03□□□□□ -0.8
TRAF1-202ENST00000540010 OCMP0CE72 109 aaPredicted RBP10.03□□□□□ -0.8
TRAF1-202ENST00000540010 TFEBP19484 476 aa10.03□□□□□ -0.8
TRAF1-202ENST00000540010 CRABP2P29373 138 aa10.03□□□□□ -0.8
TRAF1-202ENST00000540010 HARS2P49590 506 aaKnown RBP10.03□□□□□ -0.8
TRAF1-202ENST00000540010 AIF1P55008 147 aa10.03□□□□□ -0.8
TRAF1-202ENST00000540010 MAXP61244 160 aa10.03□□□□□ -0.8
TRAF1-202ENST00000540010 RALGDSQ12967 914 aa10.03□□□□□ -0.8
TRAF1-202ENST00000540010 ARHGEF7Q14155 803 aa10.03□□□□□ -0.8
TRAF1-202ENST00000540010 CENPLQ8N0S6 344 aaPredicted RBP10.03□□□□□ -0.8
TRAF1-202ENST00000540010 PARP8Q8N3A8 854 aa10.03□□□□□ -0.8
TRAF1-202ENST00000540010 GPR152Q8TDT2 470 aa10.03□□□□□ -0.8
TRAF1-202ENST00000540010 C10orf82Q8WW14 230 aa10.03□□□□□ -0.8
TRAF1-202ENST00000540010 MFSD3Q96ES6 412 aa10.03□□□□□ -0.8
TRAF1-202ENST00000540010 B3GALT6Q96L58 329 aa10.03□□□□□ -0.8
TRAF1-202ENST00000540010 C11orf84Q9BUA3 381 aaPredicted RBP10.03□□□□□ -0.8
TRAF1-202ENST00000540010 PRDM16Q9HAZ2 1276 aa10.03□□□□□ -0.8
TRAF1-202ENST00000540010 FAM72CH0Y354 149 aa10.03□□□□□ -0.8
TRAF1-202ENST00000540010 BIRC5O15392 142 aa10.03□□□□□ -0.8
TRAF1-202ENST00000540010 MSI1O43347 362 aaKnown RBP10.03□□□□□ -0.8
TRAF1-202ENST00000540010 NNMTP40261 264 aa10.03□□□□□ -0.8
TRAF1-202ENST00000540010 RENBPP51606 427 aa10.03□□□□□ -0.8
TRAF1-202ENST00000540010 SLC7A2P52569 658 aa10.03□□□□□ -0.8
TRAF1-202ENST00000540010 NR1H2P55055 460 aa10.03□□□□□ -0.8
TRAF1-202ENST00000540010 PGS1Q32NB8 556 aa10.03□□□□□ -0.8
TRAF1-202ENST00000540010 FAM72AQ5TYM5 149 aa10.03□□□□□ -0.8
TRAF1-202ENST00000540010 FAM72DQ6L9T8 149 aa10.03□□□□□ -0.8
TRAF1-202ENST00000540010 MILR1Q7Z6M3 343 aa10.03□□□□□ -0.8
TRAF1-202ENST00000540010 FAM72BQ86X60 149 aa10.03□□□□□ -0.8
TRAF1-202ENST00000540010 BANPQ8N9N5 519 aa10.03□□□□□ -0.8
TRAF1-202ENST00000540010 FAM47BQ8NA70 645 aa10.03□□□□□ -0.8
TRAF1-202ENST00000540010 ACMSDQ8TDX5 336 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms