RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 RASGRP1O95267 797 aa22.32■■□□□ 1.16
SCARB1-206ENST00000539320 PEX11BO96011 259 aa22.32■■□□□ 1.16
SCARB1-206ENST00000539320 RPIAP49247 311 aa22.32■■□□□ 1.16
SCARB1-206ENST00000539320 HK3P52790 923 aa22.32■■□□□ 1.16
SCARB1-206ENST00000539320 POLR2LP62875 67 aaKnown RBP22.32■■□□□ 1.16
SCARB1-206ENST00000539320 KRT81Q14533 505 aa22.32■■□□□ 1.16
SCARB1-206ENST00000539320 INPP5AQ14642 412 aa22.32■■□□□ 1.16
SCARB1-206ENST00000539320 CCDC122Q5T0U0 273 aa22.32■■□□□ 1.16
SCARB1-206ENST00000539320 ENPP7Q6UWV6 458 aa22.32■■□□□ 1.16
SCARB1-206ENST00000539320 HID1Q8IV36 788 aa22.32■■□□□ 1.16
SCARB1-206ENST00000539320 SLC35F3Q8IY50 421 aa22.32■■□□□ 1.16
SCARB1-206ENST00000539320 BBS5Q8N3I7 341 aa22.32■■□□□ 1.16
SCARB1-206ENST00000539320 SNIP1Q8TAD8 396 aaKnown RBP22.32■■□□□ 1.16
SCARB1-206ENST00000539320 NSMCE3Q96MG7 304 aa22.32■■□□□ 1.16
SCARB1-206ENST00000539320 CLPBQ9H078 707 aa22.32■■□□□ 1.16
SCARB1-206ENST00000539320 RCOR3Q9P2K3 495 aaPredicted RBP22.32■■□□□ 1.16
SCARB1-206ENST00000539320 KLQ9UEF7 1012 aa22.32■■□□□ 1.16
SCARB1-206ENST00000539320 OR1A2Q9Y585 309 aa22.32■■□□□ 1.16
SCARB1-206ENST00000539320 ATRXP46100 2492 aa22.32■■□□□ 1.16
SCARB1-206ENST00000539320 LRP4O75096 1905 aa22.31■■□□□ 1.16
SCARB1-206ENST00000539320 MYO1FO00160 1098 aa22.31■■□□□ 1.16
SCARB1-206ENST00000539320 MAFKO60675 156 aa22.31■■□□□ 1.16
SCARB1-206ENST00000539320 SOCS5O75159 536 aa22.31■■□□□ 1.16
SCARB1-206ENST00000539320 CSO75390 466 aaKnown RBP22.31■■□□□ 1.16
SCARB1-206ENST00000539320 RECQL5O94762 991 aaPredicted RBP22.31■■□□□ 1.16
SCARB1-206ENST00000539320 TPM3P06753 285 aa22.31■■□□□ 1.16
SCARB1-206ENST00000539320 CELA2BP08218 269 aaPredicted RBP22.31■■□□□ 1.16
SCARB1-206ENST00000539320 CR2P20023 1033 aa22.31■■□□□ 1.16
SCARB1-206ENST00000539320 ABCG1P45844 678 aa22.31■■□□□ 1.16
SCARB1-206ENST00000539320 CDH6P55285 790 aa22.31■■□□□ 1.16
SCARB1-206ENST00000539320 ELOCQ15369 112 aa22.31■■□□□ 1.16
SCARB1-206ENST00000539320 ZSCAN23Q3MJ62 389 aa22.31■■□□□ 1.16
SCARB1-206ENST00000539320 LIPIQ6XZB0 460 aa22.31■■□□□ 1.16
SCARB1-206ENST00000539320 ZNF564Q8TBZ8 553 aaPredicted RBP22.31■■□□□ 1.16
SCARB1-206ENST00000539320 NSMCE1Q8WV22 266 aa22.31■■□□□ 1.16
SCARB1-206ENST00000539320 SPOCK2Q92563 424 aa22.31■■□□□ 1.16
SCARB1-206ENST00000539320 NAT6Q93015 286 aa22.31■■□□□ 1.16
SCARB1-206ENST00000539320 TSACCQ96A04 125 aaPredicted RBP22.31■■□□□ 1.16
SCARB1-206ENST00000539320 WDR92Q96MX6 357 aa22.31■■□□□ 1.16
SCARB1-206ENST00000539320 NUDCD1Q96RS6 583 aa22.31■■□□□ 1.16
SCARB1-206ENST00000539320 MGME1Q9BQP7 344 aa22.31■■□□□ 1.16
SCARB1-206ENST00000539320 B4GALT6Q9UBX8 382 aa22.31■■□□□ 1.16
SCARB1-206ENST00000539320 DOLKQ9UPQ8 538 aa22.31■■□□□ 1.16
SCARB1-206ENST00000539320 A0A1W2PQ67 120 aa22.3■■□□□ 1.16
SCARB1-206ENST00000539320 HTRA2O43464 458 aaPredicted RBP22.3■■□□□ 1.16
SCARB1-206ENST00000539320 ALPIP09923 528 aa22.3■■□□□ 1.16
SCARB1-206ENST00000539320 CASP14P31944 242 aa22.3■■□□□ 1.16
SCARB1-206ENST00000539320 SSR1P43307 286 aaKnown RBP22.3■■□□□ 1.16
SCARB1-206ENST00000539320 KIAA1024LP59773 190 aa22.3■■□□□ 1.16
SCARB1-206ENST00000539320 HADHQ16836 314 aaKnown RBP22.3■■□□□ 1.16
SCARB1-206ENST00000539320 PGBD5Q8N414 524 aa22.3■■□□□ 1.16
SCARB1-206ENST00000539320 TPCN2Q8NHX9 752 aa22.3■■□□□ 1.16
SCARB1-206ENST00000539320 PCDH19Q8TAB3 1148 aa22.3■■□□□ 1.16
SCARB1-206ENST00000539320 PDXPQ96GD0 296 aa22.3■■□□□ 1.16
SCARB1-206ENST00000539320 NENFQ9UMX5 172 aa22.3■■□□□ 1.16
SCARB1-206ENST00000539320 ITPR1Q14643 2758 aa22.3■■□□□ 1.16
SCARB1-206ENST00000539320 SHROOM3Q8TF72 1996 aa22.29■■□□□ 1.16
SCARB1-206ENST00000539320 TTC24A2A3L6 582 aaPredicted RBP22.29■■□□□ 1.16
SCARB1-206ENST00000539320 CACNB4O00305 520 aaPredicted RBP22.29■■□□□ 1.16
SCARB1-206ENST00000539320 YY2O15391 372 aa22.29■■□□□ 1.16
SCARB1-206ENST00000539320 CPP00450 1065 aa22.29■■□□□ 1.16
SCARB1-206ENST00000539320 CTSEP14091 401 aa22.29■■□□□ 1.16
SCARB1-206ENST00000539320 TGM2P21980 687 aa22.29■■□□□ 1.16
SCARB1-206ENST00000539320 ACTN2P35609 894 aa22.29■■□□□ 1.16
SCARB1-206ENST00000539320 SRP54P61011 504 aaKnown RBP22.29■■□□□ 1.16
SCARB1-206ENST00000539320 TBC1D25Q3MII6 688 aa22.29■■□□□ 1.16
SCARB1-206ENST00000539320 PERM1Q5SV97 790 aa22.29■■□□□ 1.16
SCARB1-206ENST00000539320 ESRP1Q6NXG1 681 aaKnown RBP22.29■■□□□ 1.16
SCARB1-206ENST00000539320 PLA2G15Q8NCC3 412 aa22.29■■□□□ 1.16
SCARB1-206ENST00000539320 XPO4Q9C0E2 1151 aaKnown RBP22.29■■□□□ 1.16
SCARB1-206ENST00000539320 PCDHGC4Q9Y5F7 938 aa22.29■■□□□ 1.16
SCARB1-206ENST00000539320 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.29■■□□□ 1.161e-6■■■□□ 17.3
SCARB1-206ENST00000539320 MFSD11O43934 449 aa22.28■■□□□ 1.16
SCARB1-206ENST00000539320 GM2AP17900 193 aa22.28■■□□□ 1.16
SCARB1-206ENST00000539320 GJC1P36383 396 aa22.28■■□□□ 1.16
SCARB1-206ENST00000539320 EIF2S3P41091 472 aaKnown RBP22.28■■□□□ 1.16
SCARB1-206ENST00000539320 MMP13P45452 471 aa22.28■■□□□ 1.16
SCARB1-206ENST00000539320 GABREP78334 506 aa22.28■■□□□ 1.16
SCARB1-206ENST00000539320 TCEA2Q15560 299 aa22.28■■□□□ 1.16
SCARB1-206ENST00000539320 RALGPS1Q5JS13 557 aa22.28■■□□□ 1.16
SCARB1-206ENST00000539320 CRTC1Q6UUV9 634 aa22.28■■□□□ 1.16
SCARB1-206ENST00000539320 LRRC69Q6ZNQ3 347 aa22.28■■□□□ 1.16
SCARB1-206ENST00000539320 RD3Q7Z3Z2 195 aa22.28■■□□□ 1.16
SCARB1-206ENST00000539320 ARL10Q8N8L6 244 aa22.28■■□□□ 1.16
SCARB1-206ENST00000539320 FAM71BQ8TC56 605 aa22.28■■□□□ 1.16
SCARB1-206ENST00000539320 PDCD6IPQ8WUM4 868 aaKnown RBP22.28■■□□□ 1.16
SCARB1-206ENST00000539320 SCG3Q8WXD2 468 aaKnown RBP22.28■■□□□ 1.16
SCARB1-206ENST00000539320 FGF11Q92914 225 aa22.28■■□□□ 1.16
SCARB1-206ENST00000539320 NOD2Q9HC29 1040 aa22.28■■□□□ 1.16
SCARB1-206ENST00000539320 RRP8O43159 456 aaKnown RBP22.27■■□□□ 1.16
SCARB1-206ENST00000539320 USP12O75317 370 aa22.27■■□□□ 1.16
SCARB1-206ENST00000539320 CD48P09326 243 aa22.27■■□□□ 1.16
SCARB1-206ENST00000539320 HOXB3P14651 431 aaPredicted RBP22.27■■□□□ 1.16
SCARB1-206ENST00000539320 KELP23276 732 aa22.27■■□□□ 1.16
SCARB1-206ENST00000539320 NFKBIAP25963 317 aa22.27■■□□□ 1.16
SCARB1-206ENST00000539320 HNRNPH3P31942 346 aaKnown RBP22.27■■□□□ 1.16
SCARB1-206ENST00000539320 VIPR1P32241 457 aa22.27■■□□□ 1.16
SCARB1-206ENST00000539320 MAXP61244 160 aa22.27■■□□□ 1.16
SCARB1-206ENST00000539320 TRAF2Q12933 501 aa22.27■■□□□ 1.16
SCARB1-206ENST00000539320 MMRN1Q13201 1228 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms