RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 SGMS1Q86VZ5 419 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 CEP97Q8IW35 865 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 SLC35F3Q8IY50 421 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 ZNF843Q8N446 348 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 TTC39CQ8N584 583 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 MIGA1Q8NAN2 632 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 PRPF31Q8WWY3 499 aaKnown RBP1.09□□□□□ -2.23
HIF1A-204ENST00000539097 C14orf79Q96F83 325 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 ELMOD3Q96FG2 381 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 ZNF764Q96H86 408 aaPredicted RBP1.09□□□□□ -2.23
HIF1A-204ENST00000539097 ZNF385AQ96PM9 386 aaKnown RBP1.09□□□□□ -2.23
HIF1A-204ENST00000539097 DUX5Q96PT3 197 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 BDH2Q9BUT1 245 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 TRIM7Q9C029 511 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 FTOQ9C0B1 505 aaKnown RBP eCLIP1.09□□□□□ -2.23
HIF1A-204ENST00000539097 SCAND2PQ9GZW5 306 aaPredicted RBP1.09□□□□□ -2.23
HIF1A-204ENST00000539097 NT5C3AQ9H0P0 336 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 MRPL44Q9H9J2 332 aaKnown RBP1.09□□□□□ -2.23
HIF1A-204ENST00000539097 IL1RAPL2Q9NP60 686 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 ENTPD7Q9NQZ7 604 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 ARHGEF3Q9NR81 526 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 DECR2Q9NUI1 292 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 ABHD10Q9NUJ1 306 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 HCFC1R1Q9NWW0 138 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 WSB2Q9NYS7 404 aaPredicted RBP1.09□□□□□ -2.23
HIF1A-204ENST00000539097 A4GNTQ9UNA3 340 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 TMEM5Q9Y2B1 443 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 MAGED1Q9Y5V3 778 aaPredicted RBP1.09□□□□□ -2.23
HIF1A-204ENST00000539097 ARID2Q68CP9 1835 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 PTPRUQ92729 1446 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 MED1Q15648 1581 aaPredicted RBP1.09□□□□□ -2.23
HIF1A-204ENST00000539097 A0A0B4J203 849 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 A0A1W2PQ09 198 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 SLC22A23A1A5C7 686 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 CXorf65A6NEN9 183 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 ANKRD66B4E2M5 251 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 CCER2I3L3R5 266 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 YY2O15391 372 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 TBCAO75347 108 aaKnown RBP1.09□□□□□ -2.23
HIF1A-204ENST00000539097 BCAR3O75815 825 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 KCNK5O95279 499 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 PAK4O96013 591 aaPredicted RBP1.09□□□□□ -2.23
HIF1A-204ENST00000539097 LDLRP01130 860 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 PRKCGP05129 697 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 MMP10P09238 476 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 IFNAR1P17181 557 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 DDX6P26196 483 aaKnown RBP eCLIP1.09□□□□□ -2.23
HIF1A-204ENST00000539097 KLRC2P26717 231 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 TIA1P31483 386 aaKnown RBP eCLIP1.09□□□□□ -2.233e-7■■■■■ 42.6
HIF1A-204ENST00000539097 ACVRL1P37023 503 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 MPLP40238 635 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 NNMTP40261 264 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 SOX2P48431 317 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 JAK3P52333 1124 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 POU3F1Q03052 451 aaPredicted RBP1.09□□□□□ -2.23
HIF1A-204ENST00000539097 TFF2Q03403 129 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 ABHD18Q0P651 414 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 CCDC15Q0P6D6 951 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 PCLAFQ15004 111 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 NFIL3Q16649 462 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 ALDH1L2Q3SY69 923 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 FRG2Q64ET8 278 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 ZNF280DQ6N043 979 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 SLC30A9Q6PML9 568 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 Q6YL49 198 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 Q6ZNX1 250 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 ABI3BPQ7Z7G0 1075 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 PEG10Q86TG7 708 aaKnown RBP1.09□□□□□ -2.23
HIF1A-204ENST00000539097 RASAL3Q86YV0 1011 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 ARID3BQ8IVW6 561 aaPredicted RBP1.09□□□□□ -2.23
HIF1A-204ENST00000539097 DHX40Q8IX18 779 aaKnown RBP1.09□□□□□ -2.23
HIF1A-204ENST00000539097 GPALPP1Q8IXQ4 340 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 GALNT16Q8N428 558 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 MINDY1Q8N5J2 469 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 NEU4Q8WWR8 484 aaPredicted RBP1.09□□□□□ -2.23
HIF1A-204ENST00000539097 STARD8Q92502 1023 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 EME1Q96AY2 570 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 PKNOX2Q96KN3 472 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 KLHL15Q96M94 604 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 C1QTNF5Q9BXJ0 243 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 MRPL9Q9BYD2 267 aaKnown RBP1.09□□□□□ -2.23
HIF1A-204ENST00000539097 KRTAP4-4Q9BYR3 166 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 NYXQ9GZU5 481 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 TSPYL1Q9H0U9 437 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 TMEM245Q9H330 911 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 ANKZF1Q9H8Y5 726 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 PDE11AQ9HCR9 933 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 THAP1Q9NVV9 213 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 SH3BP4Q9P0V3 963 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 PEMTQ9UBM1 199 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 AMACRQ9UHK6 382 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 ERRFI1Q9UJM3 462 aaPredicted RBP1.09□□□□□ -2.23
HIF1A-204ENST00000539097 TUBE1Q9UJT0 475 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 PACSIN3Q9UKS6 424 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 SARDHQ9UL12 918 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 NOL7Q9UMY1 257 aaKnown RBP1.09□□□□□ -2.23
HIF1A-204ENST00000539097 FRMD4BQ9Y2L6 1034 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 RRP7AQ9Y3A4 280 aaKnown RBP1.09□□□□□ -2.23
HIF1A-204ENST00000539097 CECR2Q9BXF3 1484 aa1.09□□□□□ -2.23
HIF1A-204ENST00000539097 ZNF536O15090 1300 aa1.09□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms